Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-841P-201ENST00000383872 107 ntBASIC-2.4□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.554-201ENST00000384672 102 ntBASIC-2.4□□□□□ -2.79
TRAV1-2A0A0B4J238 MIR3064-201ENST00000581130 66 ntBASIC-2.4□□□□□ -2.79
TRAV1-2A0A0B4J238 AC080013.6-201ENST00000606185 215 ntBASIC-2.4□□□□□ -2.79
TRAV1-2A0A0B4J238 AC021753.1-201ENST00000635724 168 ntBASIC-2.4□□□□□ -2.79
TRAV1-2A0A0B4J238 U6.106-201ENST00000636360 105 ntBASIC-2.4□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.41□□□□□ -2.8
TRAV1-2A0A0B4J238 SNORD116-2-201ENST00000384274 95 ntBASIC-2.41□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR759-201ENST00000390224 91 ntBASIC-2.41□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR548U-201ENST00000390728 81 ntBASIC-2.41□□□□□ -2.8
TRAV1-2A0A0B4J238 AL021921.1-201ENST00000442774 93 ntBASIC-2.41□□□□□ -2.8
TRAV1-2A0A0B4J238 MTND1P29-201ENST00000448112 647 ntBASIC-2.41□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU6-818P-201ENST00000364837 108 ntBASIC-2.42□□□□□ -2.8
TRAV1-2A0A0B4J238 SNORA63.7-201ENST00000365579 123 ntBASIC-2.42□□□□□ -2.8
TRAV1-2A0A0B4J238 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.42□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR548Q-201ENST00000408404 100 ntBASIC-2.42□□□□□ -2.8
TRAV1-2A0A0B4J238 AL442128.1-201ENST00000615151 90 ntBASIC-2.42□□□□□ -2.8
TRAV1-2A0A0B4J238 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.43□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR1302-11-201ENST00000408051 138 ntBASIC-2.43□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR1302-9-201ENST00000408365 138 ntBASIC-2.43□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR1302-10-201ENST00000408734 138 ntBASIC-2.43□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU2-38P-201ENST00000410856 79 ntBASIC-2.43□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR548AM-201ENST00000584298 74 ntBASIC-2.43□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR1302-2-201ENST00000607096 138 ntBASIC-2.43□□□□□ -2.8
TRAV1-2A0A0B4J238 AC078883.4-201ENST00000623218 367 ntBASIC-2.43□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU6-309P-201ENST00000364573 106 ntBASIC-2.44□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU6-608P-201ENST00000383927 104 ntBASIC-2.44□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR3123-201ENST00000583417 75 ntBASIC-2.44□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR4282-201ENST00000583613 67 ntBASIC-2.44□□□□□ -2.8
TRAV1-2A0A0B4J238 AC104996.3-201ENST00000590718 94 ntBASIC-2.44□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR6739-201ENST00000622461 75 ntBASIC-2.44□□□□□ -2.8
TRAV1-2A0A0B4J238 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.45□□□□□ -2.8
TRAV1-2A0A0B4J238 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.45□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU2-16P-201ENST00000410712 136 ntBASIC-2.45□□□□□ -2.8
TRAV1-2A0A0B4J238 ELOCP20-201ENST00000422460 345 ntBASIC-2.45□□□□□ -2.8
TRAV1-2A0A0B4J238 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.45□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR23C-201ENST00000579846 100 ntBASIC-2.45□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU6-824P-201ENST00000363724 104 ntBASIC-2.46□□□□□ -2.8
TRAV1-2A0A0B4J238 RNY4P28-201ENST00000365281 93 ntBASIC-2.46□□□□□ -2.8
TRAV1-2A0A0B4J238 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.46□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.46□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU6-62P-201ENST00000516526 102 ntBASIC-2.46□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.46□□□□□ -2.8
TRAV1-2A0A0B4J238 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.46□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR4773-1-201ENST00000637203 78 ntBASIC-2.46□□□□□ -2.8
TRAV1-2A0A0B4J238 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU6-478P-201ENST00000363904 110 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU6-409P-201ENST00000384114 104 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 SNORD116-1-201ENST00000384335 95 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 SNORD116-29-201ENST00000384516 83 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 RNU6-768P-201ENST00000384683 107 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 MT-TW-201ENST00000387382 68 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 SNORD90-201ENST00000391145 111 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 MIR3149-201ENST00000584629 83 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 AC002553.4-201ENST00000616896 331 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 MTND4LP32-201ENST00000636111 270 ntBASIC-2.47□□□□□ -2.8
TRAV1-2A0A0B4J238 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.48□□□□□ -2.81
TRAV1-2A0A0B4J238 RNU6-151P-201ENST00000364158 107 ntBASIC-2.48□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.48□□□□□ -2.81
TRAV1-2A0A0B4J238 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.48□□□□□ -2.81
TRAV1-2A0A0B4J238 AC113139.1-201ENST00000605049 239 ntBASIC-2.48□□□□□ -2.81
TRAV1-2A0A0B4J238 MIR3688-2-201ENST00000636963 87 ntBASIC-2.48□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.49□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.49□□□□□ -2.81
TRAV1-2A0A0B4J238 RNU4-88P-201ENST00000411220 86 ntBASIC-2.49□□□□□ -2.81
TRAV1-2A0A0B4J238 AL691482.2-201ENST00000457453 84 ntBASIC-2.49□□□□□ -2.81
TRAV1-2A0A0B4J238 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.49□□□□□ -2.81
TRAV1-2A0A0B4J238 AL513043.2-201ENST00000573941 143 ntBASIC-2.49□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.5□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.5□□□□□ -2.81
TRAV1-2A0A0B4J238 SNORD18B-201ENST00000365659 72 ntBASIC-2.5□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.5□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.51□□□□□ -2.81
TRAV1-2A0A0B4J238 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.51□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.51□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.51□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.51□□□□□ -2.81
TRAV1-2A0A0B4J238 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.51□□□□□ -2.81
TRAV1-2A0A0B4J238 RNU7-152P-201ENST00000458982 64 ntBASIC-2.51□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.51□□□□□ -2.81
TRAV1-2A0A0B4J238 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.51□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.52□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.52□□□□□ -2.81
TRAV1-2A0A0B4J238 SNORA75.5-201ENST00000391291 81 ntBASIC-2.52□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.52□□□□□ -2.81
TRAV1-2A0A0B4J238 SNORD4B-201ENST00000459083 72 ntBASIC-2.52□□□□□ -2.81
TRAV1-2A0A0B4J238 RNY3P15-201ENST00000516297 97 ntBASIC-2.52□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.52□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.53□□□□□ -2.81
TRAV1-2A0A0B4J238 RNU6-770P-201ENST00000363929 105 ntBASIC-2.53□□□□□ -2.81
TRAV1-2A0A0B4J238 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.53□□□□□ -2.81
TRAV1-2A0A0B4J238 MIR548D2-201ENST00000384955 97 ntBASIC-2.53□□□□□ -2.81
TRAV1-2A0A0B4J238 RNA5SP292-201ENST00000390974 118 ntBASIC-2.53□□□□□ -2.81
TRAV1-2A0A0B4J238 RNU6-630P-201ENST00000391258 106 ntBASIC-2.53□□□□□ -2.81
TRAV1-2A0A0B4J238 MIR1252-201ENST00000408861 65 ntBASIC-2.53□□□□□ -2.81
TRAV1-2A0A0B4J238 MTATP6P29-201ENST00000415057 132 ntBASIC-2.53□□□□□ -2.81
TRAV1-2A0A0B4J238 MTND3P2-201ENST00000438452 342 ntBASIC-2.53□□□□□ -2.81
TRAV1-2A0A0B4J238 AC120024.2-201ENST00000576526 175 ntBASIC-2.53□□□□□ -2.81
TRAV1-2A0A0B4J238 RNY4P7-201ENST00000364600 96 ntBASIC-2.54□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms