Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 RNU1-123P-201ENST00000458950 160 ntBASIC2.74□□□□□ -1.97
CCDC61Q9Y6R9 AC079140.2-201ENST00000506193 142 ntBASIC2.74□□□□□ -1.97
CCDC61Q9Y6R9 RNU6-980P-201ENST00000516925 103 ntBASIC2.74□□□□□ -1.97
CCDC61Q9Y6R9 AC019176.1-201ENST00000518519 225 ntBASIC2.74□□□□□ -1.97
CCDC61Q9Y6R9 Z82195.2-201ENST00000612348 18351 ntBASIC2.74□□□□□ -1.97
CCDC61Q9Y6R9 RNU7-56P-201ENST00000458744 62 ntBASIC2.73□□□□□ -1.97
CCDC61Q9Y6R9 AC104435.1-201ENST00000483483 166 ntBASIC2.73□□□□□ -1.97
CCDC61Q9Y6R9 RNU7-174P-201ENST00000516248 59 ntBASIC2.73□□□□□ -1.97
CCDC61Q9Y6R9 AC023827.1-201ENST00000569247 97 ntBASIC2.73□□□□□ -1.97
CCDC61Q9Y6R9 AL157834.3-201ENST00000615543 103 ntBASIC2.73□□□□□ -1.97
CCDC61Q9Y6R9 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
CCDC61Q9Y6R9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC61Q9Y6R9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CCDC61Q9Y6R9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC61Q9Y6R9 MT-TY-201ENST00000387409 66 ntBASIC2.72□□□□□ -1.97
CCDC61Q9Y6R9 snoU13.9-201ENST00000458927 103 ntBASIC2.72□□□□□ -1.97
CCDC61Q9Y6R9 RNU6-165P-201ENST00000517170 99 ntBASIC2.72□□□□□ -1.97
CCDC61Q9Y6R9 MIR4460-201ENST00000577862 86 ntBASIC2.72□□□□□ -1.97
CCDC61Q9Y6R9 MIR4446-201ENST00000578505 67 ntBASIC2.72□□□□□ -1.97
CCDC61Q9Y6R9 RNA5SP393-201ENST00000363423 117 ntBASIC2.71□□□□□ -1.98
CCDC61Q9Y6R9 RNU6-930P-201ENST00000390938 100 ntBASIC2.71□□□□□ -1.98
CCDC61Q9Y6R9 SNORA75.2-201ENST00000391138 150 ntBASIC2.71□□□□□ -1.98
CCDC61Q9Y6R9 SNORA75.3-201ENST00000391231 150 ntBASIC2.71□□□□□ -1.98
CCDC61Q9Y6R9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.71□□□□□ -1.98
CCDC61Q9Y6R9 MIR3937-201ENST00000580135 106 ntBASIC2.71□□□□□ -1.98
CCDC61Q9Y6R9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC61Q9Y6R9 RNU6-35P-201ENST00000384530 107 ntBASIC2.7□□□□□ -1.98
CCDC61Q9Y6R9 AL137847.3-201ENST00000611521 109 ntBASIC2.7□□□□□ -1.98
CCDC61Q9Y6R9 AL773524.1-201ENST00000614065 229 ntBASIC2.7□□□□□ -1.98
CCDC61Q9Y6R9 U2.7-201ENST00000619197 100 ntBASIC2.7□□□□□ -1.98
CCDC61Q9Y6R9 MIR100-201ENST00000385259 80 ntBASIC2.69□□□□□ -1.98
CCDC61Q9Y6R9 MIR4713-201ENST00000582691 75 ntBASIC2.69□□□□□ -1.98
CCDC61Q9Y6R9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.69□□□□□ -1.98
CCDC61Q9Y6R9 U4.4-201ENST00000620626 117 ntBASIC2.69□□□□□ -1.98
CCDC61Q9Y6R9 SNORD1A-201ENST00000364968 72 ntBASIC2.68□□□□□ -1.98
CCDC61Q9Y6R9 AC048334.1-201ENST00000477975 159 ntBASIC2.68□□□□□ -1.98
CCDC61Q9Y6R9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC61Q9Y6R9 RNU4-33P-201ENST00000364316 85 ntBASIC2.67□□□□□ -1.98
CCDC61Q9Y6R9 SNORA15B-2-201ENST00000384058 135 ntBASIC2.67□□□□□ -1.98
CCDC61Q9Y6R9 SNORA15B-1-201ENST00000384334 135 ntBASIC2.67□□□□□ -1.98
CCDC61Q9Y6R9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.67□□□□□ -1.98
CCDC61Q9Y6R9 MIR302D-201ENST00000362275 68 ntBASIC2.66□□□□□ -1.98
CCDC61Q9Y6R9 MIRLET7G-201ENST00000362280 84 ntBASIC2.66□□□□□ -1.98
CCDC61Q9Y6R9 AL591704.2-201ENST00000421658 181 ntBASIC2.66□□□□□ -1.98
CCDC61Q9Y6R9 snoU13.13-201ENST00000458842 104 ntBASIC2.66□□□□□ -1.98
CCDC61Q9Y6R9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CCDC61Q9Y6R9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC61Q9Y6R9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
CCDC61Q9Y6R9 MIR1-1-201ENST00000362147 71 ntBASIC2.65□□□□□ -1.99
CCDC61Q9Y6R9 MIR520F-201ENST00000384824 87 ntBASIC2.65□□□□□ -1.99
CCDC61Q9Y6R9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC61Q9Y6R9 MIR548L-201ENST00000408303 86 ntBASIC2.64□□□□□ -1.99
CCDC61Q9Y6R9 SNORA31.2-201ENST00000516019 134 ntBASIC2.64□□□□□ -1.99
CCDC61Q9Y6R9 RNU6-135P-201ENST00000516769 101 ntBASIC2.64□□□□□ -1.99
CCDC61Q9Y6R9 RNU6-231P-201ENST00000517122 103 ntBASIC2.64□□□□□ -1.99
CCDC61Q9Y6R9 RNA5SP402-201ENST00000517148 110 ntBASIC2.64□□□□□ -1.99
CCDC61Q9Y6R9 AL136317.1-201ENST00000612653 226 ntBASIC2.64□□□□□ -1.99
CCDC61Q9Y6R9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC61Q9Y6R9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCDC61Q9Y6R9 SNORA17.3-201ENST00000391159 129 ntBASIC2.63□□□□□ -1.99
CCDC61Q9Y6R9 AC003989.2-201ENST00000440224 169 ntBASIC2.63□□□□□ -1.99
CCDC61Q9Y6R9 SNORD41.1-201ENST00000391000 69 ntBASIC2.62□□□□□ -1.99
CCDC61Q9Y6R9 AL512310.8-201ENST00000550183 120 ntBASIC2.62□□□□□ -1.99
CCDC61Q9Y6R9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC61Q9Y6R9 MIR9-3-201ENST00000385084 90 ntBASIC2.61□□□□□ -1.99
CCDC61Q9Y6R9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC61Q9Y6R9 Y_RNA.676-201ENST00000516393 96 ntBASIC2.61□□□□□ -1.99
CCDC61Q9Y6R9 MIR4287-201ENST00000579398 78 ntBASIC2.61□□□□□ -1.99
CCDC61Q9Y6R9 7SK.11-201ENST00000615477 250 ntBASIC2.61□□□□□ -1.99
CCDC61Q9Y6R9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC61Q9Y6R9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC61Q9Y6R9 Y_RNA.246-201ENST00000364495 108 ntBASIC2.6□□□□□ -1.99
CCDC61Q9Y6R9 AC108667.1-201ENST00000428618 249 ntBASIC2.6□□□□□ -1.99
CCDC61Q9Y6R9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC61Q9Y6R9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC61Q9Y6R9 Y_RNA.125-201ENST00000363371 111 ntBASIC2.59□□□□□ -1.99
CCDC61Q9Y6R9 RNA5SP160-201ENST00000364866 120 ntBASIC2.59□□□□□ -1.99
CCDC61Q9Y6R9 Y_RNA.338-201ENST00000365320 114 ntBASIC2.59□□□□□ -1.99
CCDC61Q9Y6R9 RNU7-21P-201ENST00000459430 62 ntBASIC2.59□□□□□ -1.99
CCDC61Q9Y6R9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC61Q9Y6R9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC61Q9Y6R9 SNORA41B-201ENST00000384785 128 ntBASIC2.58□□□□□ -2
CCDC61Q9Y6R9 RN7SKP88-201ENST00000516847 250 ntBASIC2.58□□□□□ -2
CCDC61Q9Y6R9 SNORA44.1-201ENST00000517031 108 ntBASIC2.58□□□□□ -2
CCDC61Q9Y6R9 MIR4498-201ENST00000577599 66 ntBASIC2.58□□□□□ -2
CCDC61Q9Y6R9 MIR4639-201ENST00000584938 69 ntBASIC2.58□□□□□ -2
CCDC61Q9Y6R9 7SK.8-201ENST00000612110 250 ntBASIC2.58□□□□□ -2
CCDC61Q9Y6R9 7SK.13-201ENST00000622040 250 ntBASIC2.58□□□□□ -2
CCDC61Q9Y6R9 SNORA7.1-201ENST00000363750 139 ntBASIC2.57□□□□□ -2
CCDC61Q9Y6R9 RNU1-141P-201ENST00000364623 158 ntBASIC2.57□□□□□ -2
CCDC61Q9Y6R9 SNORA80D-201ENST00000384488 135 ntBASIC2.57□□□□□ -2
CCDC61Q9Y6R9 SNORD116.2-201ENST00000391251 93 ntBASIC2.57□□□□□ -2
CCDC61Q9Y6R9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.57□□□□□ -2
CCDC61Q9Y6R9 RNU7-90P-201ENST00000459216 62 ntBASIC2.57□□□□□ -2
CCDC61Q9Y6R9 RNU6-469P-201ENST00000516253 101 ntBASIC2.57□□□□□ -2
CCDC61Q9Y6R9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC61Q9Y6R9 SNORA33.1-201ENST00000364957 130 ntBASIC2.56□□□□□ -2
CCDC61Q9Y6R9 RNA5SP190-201ENST00000365222 118 ntBASIC2.56□□□□□ -2
CCDC61Q9Y6R9 MIR30A-201ENST00000385092 71 ntBASIC2.56□□□□□ -2
CCDC61Q9Y6R9 MIR758-201ENST00000390227 88 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms