Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SNORD28-201ENST00000384706 75 ntBASIC0.59□□□□□ -2.31
RAI2Q9Y5P3 RNU6-466P-201ENST00000391224 103 ntBASIC0.59□□□□□ -2.31
RAI2Q9Y5P3 SNORD71-201ENST00000411292 86 ntBASIC0.59□□□□□ -2.31
RAI2Q9Y5P3 RNU7-104P-201ENST00000459398 79 ntBASIC0.59□□□□□ -2.31
RAI2Q9Y5P3 MIR4777-201ENST00000583710 86 ntBASIC0.59□□□□□ -2.31
RAI2Q9Y5P3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.59□□□□□ -2.31
RAI2Q9Y5P3 AC243829.6-201ENST00000612652 106 ntBASIC0.59□□□□□ -2.31
RAI2Q9Y5P3 Y_RNA.495-201ENST00000384435 112 ntBASIC0.58□□□□□ -2.32
RAI2Q9Y5P3 RNU6-30P-201ENST00000384561 107 ntBASIC0.58□□□□□ -2.32
RAI2Q9Y5P3 RNU6-887P-201ENST00000410660 100 ntBASIC0.58□□□□□ -2.32
RAI2Q9Y5P3 RNA5SP227-201ENST00000516184 113 ntBASIC0.58□□□□□ -2.32
RAI2Q9Y5P3 SNORA40.13-201ENST00000516379 120 ntBASIC0.58□□□□□ -2.32
RAI2Q9Y5P3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.58□□□□□ -2.32
RAI2Q9Y5P3 RNU6-537P-201ENST00000517277 103 ntBASIC0.58□□□□□ -2.32
RAI2Q9Y5P3 MIR548Z-201ENST00000584743 97 ntBASIC0.58□□□□□ -2.32
RAI2Q9Y5P3 SNORD36A-201ENST00000362874 73 ntBASIC0.57□□□□□ -2.32
RAI2Q9Y5P3 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
RAI2Q9Y5P3 RNU7-61P-201ENST00000515897 61 ntBASIC0.57□□□□□ -2.32
RAI2Q9Y5P3 RNA5SP47-201ENST00000517230 109 ntBASIC0.57□□□□□ -2.32
RAI2Q9Y5P3 AC023932.2-201ENST00000603176 175 ntBASIC0.57□□□□□ -2.32
RAI2Q9Y5P3 AC025521.1-201ENST00000621624 286 ntBASIC0.57□□□□□ -2.32
RAI2Q9Y5P3 AC067863.3-201ENST00000624172 122 ntBASIC0.57□□□□□ -2.32
RAI2Q9Y5P3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
RAI2Q9Y5P3 RNU6-644P-201ENST00000391155 98 ntBASIC0.56□□□□□ -2.32
RAI2Q9Y5P3 RNU7-13P-201ENST00000516413 62 ntBASIC0.56□□□□□ -2.32
RAI2Q9Y5P3 RNA5SP268-201ENST00000516828 124 ntBASIC0.56□□□□□ -2.32
RAI2Q9Y5P3 AL513043.2-201ENST00000573941 143 ntBASIC0.56□□□□□ -2.32
RAI2Q9Y5P3 RNU6-153P-201ENST00000364422 104 ntBASIC0.55□□□□□ -2.32
RAI2Q9Y5P3 RNU6-158P-201ENST00000517104 100 ntBASIC0.55□□□□□ -2.32
RAI2Q9Y5P3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.54□□□□□ -2.32
RAI2Q9Y5P3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
RAI2Q9Y5P3 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
RAI2Q9Y5P3 MTATP8P2-201ENST00000435212 202 ntBASIC0.54□□□□□ -2.32
RAI2Q9Y5P3 Y_RNA.677-201ENST00000516401 85 ntBASIC0.54□□□□□ -2.32
RAI2Q9Y5P3 RNU7-161P-201ENST00000517289 62 ntBASIC0.54□□□□□ -2.32
RAI2Q9Y5P3 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
RAI2Q9Y5P3 AP001318.4-201ENST00000616637 121 ntBASIC0.54□□□□□ -2.32
RAI2Q9Y5P3 TRDV1-202ENST00000621643 102 ntBASIC0.54□□□□□ -2.32
RAI2Q9Y5P3 RNA5SP403-201ENST00000363598 108 ntBASIC0.53□□□□□ -2.32
RAI2Q9Y5P3 SNORD116-10-201ENST00000363791 102 ntBASIC0.53□□□□□ -2.32
RAI2Q9Y5P3 RNA5SP517-201ENST00000364724 117 ntBASIC0.53□□□□□ -2.32
RAI2Q9Y5P3 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
RAI2Q9Y5P3 SNORA8.2-201ENST00000384372 139 ntBASIC0.53□□□□□ -2.32
RAI2Q9Y5P3 RNA5SP25-201ENST00000410815 110 ntBASIC0.53□□□□□ -2.32
RAI2Q9Y5P3 Y_RNA.648-201ENST00000459455 110 ntBASIC0.53□□□□□ -2.32
RAI2Q9Y5P3 RNU6-65P-201ENST00000516332 98 ntBASIC0.53□□□□□ -2.32
RAI2Q9Y5P3 MIR4802-201ENST00000581881 80 ntBASIC0.53□□□□□ -2.32
RAI2Q9Y5P3 SNORD115-44-201ENST00000365391 82 ntBASIC0.52□□□□□ -2.33
RAI2Q9Y5P3 SNORA2A-201ENST00000383885 135 ntBASIC0.52□□□□□ -2.33
RAI2Q9Y5P3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.52□□□□□ -2.33
RAI2Q9Y5P3 RNU6-168P-201ENST00000516189 101 ntBASIC0.52□□□□□ -2.33
RAI2Q9Y5P3 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
RAI2Q9Y5P3 SNORA25.18-201ENST00000607153 114 ntBASIC0.52□□□□□ -2.33
RAI2Q9Y5P3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.52□□□□□ -2.33
RAI2Q9Y5P3 U7.3-201ENST00000616123 62 ntBASIC0.52□□□□□ -2.33
RAI2Q9Y5P3 SNORA36.1-201ENST00000363424 132 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 RNU6-957P-201ENST00000363652 99 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 Y_RNA.283-201ENST00000364798 112 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 SNORD58A-201ENST00000383875 65 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 RNU6-519P-201ENST00000410590 108 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 Z95118.1-201ENST00000421372 247 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 snoU13.11-201ENST00000459219 104 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 RNU6-162P-201ENST00000516228 103 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 MIR4536-1-201ENST00000583537 88 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 MIR6828-201ENST00000636181 60 ntBASIC0.51□□□□□ -2.33
RAI2Q9Y5P3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
RAI2Q9Y5P3 Y_RNA.596-201ENST00000410462 109 ntBASIC0.5□□□□□ -2.33
RAI2Q9Y5P3 AL161932.1-201ENST00000437408 146 ntBASIC0.5□□□□□ -2.33
RAI2Q9Y5P3 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
RAI2Q9Y5P3 RNU7-74P-201ENST00000459104 62 ntBASIC0.5□□□□□ -2.33
RAI2Q9Y5P3 MIR518A1-201ENST00000385068 85 ntBASIC0.49□□□□□ -2.33
RAI2Q9Y5P3 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
RAI2Q9Y5P3 RNU6-1265P-201ENST00000516342 103 ntBASIC0.49□□□□□ -2.33
RAI2Q9Y5P3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.49□□□□□ -2.33
RAI2Q9Y5P3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
RAI2Q9Y5P3 RNU6-726P-201ENST00000364680 107 ntBASIC0.48□□□□□ -2.33
RAI2Q9Y5P3 Y_RNA.348-201ENST00000365403 103 ntBASIC0.48□□□□□ -2.33
RAI2Q9Y5P3 RNA5SP89-201ENST00000410300 108 ntBASIC0.48□□□□□ -2.33
RAI2Q9Y5P3 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
RAI2Q9Y5P3 MIR7107-201ENST00000611489 80 ntBASIC0.48□□□□□ -2.33
RAI2Q9Y5P3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
RAI2Q9Y5P3 SNORD118-201ENST00000363593 134 ntBASIC0.47□□□□□ -2.33
RAI2Q9Y5P3 SNORD101-201ENST00000384027 73 ntBASIC0.47□□□□□ -2.33
RAI2Q9Y5P3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.47□□□□□ -2.33
RAI2Q9Y5P3 Y_RNA.220-201ENST00000364244 109 ntBASIC0.46□□□□□ -2.34
RAI2Q9Y5P3 SNORD41.1-201ENST00000391000 69 ntBASIC0.46□□□□□ -2.34
RAI2Q9Y5P3 MIR3920-201ENST00000581751 86 ntBASIC0.46□□□□□ -2.34
RAI2Q9Y5P3 U6.100-201ENST00000636230 99 ntBASIC0.46□□□□□ -2.34
RAI2Q9Y5P3 RNU6-509P-201ENST00000363519 107 ntBASIC0.45□□□□□ -2.34
RAI2Q9Y5P3 Y_RNA.239-201ENST00000364444 113 ntBASIC0.45□□□□□ -2.34
RAI2Q9Y5P3 Y_RNA.290-201ENST00000364879 114 ntBASIC0.45□□□□□ -2.34
RAI2Q9Y5P3 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
RAI2Q9Y5P3 RNA5SP299-201ENST00000391203 116 ntBASIC0.45□□□□□ -2.34
RAI2Q9Y5P3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.45□□□□□ -2.34
RAI2Q9Y5P3 MALAT1.1-201ENST00000618249 95 ntBASIC0.45□□□□□ -2.34
RAI2Q9Y5P3 RNU6-664P-201ENST00000362381 107 ntBASIC0.44□□□□□ -2.34
RAI2Q9Y5P3 SNORD114-15-201ENST00000364687 72 ntBASIC0.44□□□□□ -2.34
RAI2Q9Y5P3 MIR548U-201ENST00000390728 81 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 237.4 ms