Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
PCDHA13Q9Y5I0 AL161932.1-201ENST00000437408 146 ntBASIC0.62□□□□□ -2.31
PCDHA13Q9Y5I0 SNORD4B-201ENST00000459083 72 ntBASIC0.62□□□□□ -2.31
PCDHA13Q9Y5I0 RNU7-74P-201ENST00000459104 62 ntBASIC0.62□□□□□ -2.31
PCDHA13Q9Y5I0 RNU6-75P-201ENST00000515944 104 ntBASIC0.62□□□□□ -2.31
PCDHA13Q9Y5I0 RNU6-65P-201ENST00000516332 98 ntBASIC0.62□□□□□ -2.31
PCDHA13Q9Y5I0 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
PCDHA13Q9Y5I0 RNA5SP121-201ENST00000516537 101 ntBASIC0.62□□□□□ -2.31
PCDHA13Q9Y5I0 MALAT1.1-201ENST00000618249 95 ntBASIC0.62□□□□□ -2.31
PCDHA13Q9Y5I0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.61□□□□□ -2.31
PCDHA13Q9Y5I0 MIR548L-201ENST00000408303 86 ntBASIC0.61□□□□□ -2.31
PCDHA13Q9Y5I0 RNU6-519P-201ENST00000410590 108 ntBASIC0.61□□□□□ -2.31
PCDHA13Q9Y5I0 RNU6-162P-201ENST00000516228 103 ntBASIC0.61□□□□□ -2.31
PCDHA13Q9Y5I0 Y_RNA.694-201ENST00000516677 117 ntBASIC0.61□□□□□ -2.31
PCDHA13Q9Y5I0 AL162376.1-201ENST00000624117 175 ntBASIC0.61□□□□□ -2.31
PCDHA13Q9Y5I0 SNORD114-26-201ENST00000363543 72 ntBASIC0.6□□□□□ -2.31
PCDHA13Q9Y5I0 Y_RNA.190-201ENST00000363964 101 ntBASIC0.6□□□□□ -2.31
PCDHA13Q9Y5I0 RNU6-716P-201ENST00000365621 103 ntBASIC0.6□□□□□ -2.31
PCDHA13Q9Y5I0 RNA5SP436-201ENST00000516020 115 ntBASIC0.6□□□□□ -2.31
PCDHA13Q9Y5I0 MIR6513-201ENST00000621188 64 ntBASIC0.6□□□□□ -2.31
PCDHA13Q9Y5I0 U6.100-201ENST00000636230 99 ntBASIC0.6□□□□□ -2.31
PCDHA13Q9Y5I0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.6□□□□□ -2.31
PCDHA13Q9Y5I0 RNU6-664P-201ENST00000362381 107 ntBASIC0.59□□□□□ -2.31
PCDHA13Q9Y5I0 MIR216A-201ENST00000385063 110 ntBASIC0.59□□□□□ -2.31
PCDHA13Q9Y5I0 MTATP6P29-201ENST00000415057 132 ntBASIC0.59□□□□□ -2.31
PCDHA13Q9Y5I0 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
PCDHA13Q9Y5I0 RNU6-863P-201ENST00000515989 104 ntBASIC0.59□□□□□ -2.31
PCDHA13Q9Y5I0 MIR4696-201ENST00000581431 70 ntBASIC0.59□□□□□ -2.31
PCDHA13Q9Y5I0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.59□□□□□ -2.31
PCDHA13Q9Y5I0 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 SNORD101-201ENST00000384027 73 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 MIR7-2-201ENST00000384970 110 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 MIR617-201ENST00000385030 97 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 RNU2-59P-201ENST00000410482 191 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 RNU6-848P-201ENST00000515948 107 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 RNU6-617P-201ENST00000516147 107 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 RNU6-473P-201ENST00000516164 107 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 RNU6-287P-201ENST00000516230 98 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 SNORA25.18-201ENST00000607153 114 ntBASIC0.58□□□□□ -2.32
PCDHA13Q9Y5I0 Y_RNA.207-201ENST00000364142 106 ntBASIC0.57□□□□□ -2.32
PCDHA13Q9Y5I0 Y_RNA.220-201ENST00000364244 109 ntBASIC0.57□□□□□ -2.32
PCDHA13Q9Y5I0 MIR488-201ENST00000365739 83 ntBASIC0.57□□□□□ -2.32
PCDHA13Q9Y5I0 RN7SL793P-201ENST00000583259 296 ntBASIC0.57□□□□□ -2.32
PCDHA13Q9Y5I0 AC026421.1-201ENST00000519101 163 ntBASIC0.56□□□□□ -2.32
PCDHA13Q9Y5I0 MIR548AG2-201ENST00000581228 64 ntBASIC0.56□□□□□ -2.32
PCDHA13Q9Y5I0 RNU6-509P-201ENST00000363519 107 ntBASIC0.55□□□□□ -2.32
PCDHA13Q9Y5I0 Y_RNA.239-201ENST00000364444 113 ntBASIC0.55□□□□□ -2.32
PCDHA13Q9Y5I0 RNU6-269P-201ENST00000391077 97 ntBASIC0.55□□□□□ -2.32
PCDHA13Q9Y5I0 Y_RNA.609-201ENST00000410669 89 ntBASIC0.55□□□□□ -2.32
PCDHA13Q9Y5I0 MIR2113-201ENST00000459007 91 ntBASIC0.55□□□□□ -2.32
PCDHA13Q9Y5I0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.55□□□□□ -2.32
PCDHA13Q9Y5I0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
PCDHA13Q9Y5I0 SNORD44.1-201ENST00000363202 61 ntBASIC0.54□□□□□ -2.32
PCDHA13Q9Y5I0 RNY1P4-201ENST00000384595 115 ntBASIC0.54□□□□□ -2.32
PCDHA13Q9Y5I0 MIR548U-201ENST00000390728 81 ntBASIC0.54□□□□□ -2.32
PCDHA13Q9Y5I0 AC069271.1-201ENST00000445577 156 ntBASIC0.54□□□□□ -2.32
PCDHA13Q9Y5I0 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
PCDHA13Q9Y5I0 AC073869.9-201ENST00000641610 120 ntBASIC0.54□□□□□ -2.32
PCDHA13Q9Y5I0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
PCDHA13Q9Y5I0 MIR519E-201ENST00000385075 84 ntBASIC0.53□□□□□ -2.32
PCDHA13Q9Y5I0 MIR936-201ENST00000401264 98 ntBASIC0.53□□□□□ -2.32
PCDHA13Q9Y5I0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.53□□□□□ -2.32
PCDHA13Q9Y5I0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
PCDHA13Q9Y5I0 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
PCDHA13Q9Y5I0 MIR216B-201ENST00000390186 82 ntBASIC0.52□□□□□ -2.33
PCDHA13Q9Y5I0 RNU6-935P-201ENST00000410371 100 ntBASIC0.52□□□□□ -2.33
PCDHA13Q9Y5I0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
PCDHA13Q9Y5I0 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
PCDHA13Q9Y5I0 RNU6-811P-201ENST00000384069 107 ntBASIC0.51□□□□□ -2.33
PCDHA13Q9Y5I0 SNORD116-22-201ENST00000384430 92 ntBASIC0.51□□□□□ -2.33
PCDHA13Q9Y5I0 AC093423.1-201ENST00000440817 142 ntBASIC0.51□□□□□ -2.33
PCDHA13Q9Y5I0 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
PCDHA13Q9Y5I0 MIR5706-201ENST00000579841 80 ntBASIC0.51□□□□□ -2.33
PCDHA13Q9Y5I0 MIR3064-201ENST00000581130 66 ntBASIC0.51□□□□□ -2.33
PCDHA13Q9Y5I0 MIRLET7D-201ENST00000362263 87 ntBASIC0.5□□□□□ -2.33
PCDHA13Q9Y5I0 SNORD114-23-201ENST00000363536 72 ntBASIC0.5□□□□□ -2.33
PCDHA13Q9Y5I0 RNU6-132P-201ENST00000383863 107 ntBASIC0.5□□□□□ -2.33
PCDHA13Q9Y5I0 U3.27-201ENST00000391237 200 ntBASIC0.5□□□□□ -2.33
PCDHA13Q9Y5I0 RNU6-1057P-201ENST00000517162 102 ntBASIC0.5□□□□□ -2.33
PCDHA13Q9Y5I0 RNU6-844P-201ENST00000517175 102 ntBASIC0.5□□□□□ -2.33
PCDHA13Q9Y5I0 AC104996.3-201ENST00000590718 94 ntBASIC0.5□□□□□ -2.33
PCDHA13Q9Y5I0 MIR6779-201ENST00000617283 64 ntBASIC0.5□□□□□ -2.33
PCDHA13Q9Y5I0 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
PCDHA13Q9Y5I0 AC090625.1-201ENST00000357130 210 ntBASIC0.49□□□□□ -2.33
PCDHA13Q9Y5I0 MIRLET7F1-201ENST00000362202 87 ntBASIC0.49□□□□□ -2.33
PCDHA13Q9Y5I0 RNU1-141P-201ENST00000364623 158 ntBASIC0.49□□□□□ -2.33
PCDHA13Q9Y5I0 RNY4P30-201ENST00000410216 95 ntBASIC0.49□□□□□ -2.33
PCDHA13Q9Y5I0 RNU6-1131P-201ENST00000364955 107 ntBASIC0.48□□□□□ -2.33
PCDHA13Q9Y5I0 RNY1P7-201ENST00000384743 110 ntBASIC0.48□□□□□ -2.33
PCDHA13Q9Y5I0 MIR4668-201ENST00000582284 70 ntBASIC0.48□□□□□ -2.33
PCDHA13Q9Y5I0 RNU1-29P-201ENST00000606574 126 ntBASIC0.48□□□□□ -2.33
PCDHA13Q9Y5I0 Y_RNA.491-201ENST00000384417 107 ntBASIC0.47□□□□□ -2.33
PCDHA13Q9Y5I0 MIR193B-201ENST00000384907 83 ntBASIC0.47□□□□□ -2.33
PCDHA13Q9Y5I0 MIR1236-201ENST00000408340 102 ntBASIC0.47□□□□□ -2.33
PCDHA13Q9Y5I0 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
PCDHA13Q9Y5I0 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
PCDHA13Q9Y5I0 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.47□□□□□ -2.33
PCDHA13Q9Y5I0 AC010487.4-201ENST00000637027 61 ntBASIC0.47□□□□□ -2.33
PCDHA13Q9Y5I0 RNU6-633P-201ENST00000362612 103 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms