Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SNORD13-201ENST00000459299 104 ntBASIC1.75□□□□□ -2.13
PCDHB11Q9Y5F2 MIR3920-201ENST00000581751 86 ntBASIC1.75□□□□□ -2.13
PCDHB11Q9Y5F2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PCDHB11Q9Y5F2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PCDHB11Q9Y5F2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.74□□□□□ -2.13
PCDHB11Q9Y5F2 SNORD115-31-201ENST00000365318 82 ntBASIC1.74□□□□□ -2.13
PCDHB11Q9Y5F2 SNORA25-201ENST00000384384 134 ntBASIC1.74□□□□□ -2.13
PCDHB11Q9Y5F2 SNORA67.5-201ENST00000391036 107 ntBASIC1.74□□□□□ -2.13
PCDHB11Q9Y5F2 MIR1287-201ENST00000408492 90 ntBASIC1.74□□□□□ -2.13
PCDHB11Q9Y5F2 MIR548AG2-201ENST00000581228 64 ntBASIC1.74□□□□□ -2.13
PCDHB11Q9Y5F2 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.74□□□□□ -2.13
PCDHB11Q9Y5F2 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
PCDHB11Q9Y5F2 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
PCDHB11Q9Y5F2 Y_RNA.258-201ENST00000364613 105 ntBASIC1.72□□□□□ -2.13
PCDHB11Q9Y5F2 SNORD30.1-201ENST00000391309 70 ntBASIC1.72□□□□□ -2.13
PCDHB11Q9Y5F2 RNU7-104P-201ENST00000459398 79 ntBASIC1.72□□□□□ -2.13
PCDHB11Q9Y5F2 AC002350.1-201ENST00000490759 375 ntBASIC1.72□□□□□ -2.13
PCDHB11Q9Y5F2 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
PCDHB11Q9Y5F2 MIR216B-201ENST00000390186 82 ntBASIC1.71□□□□□ -2.14
PCDHB11Q9Y5F2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PCDHB11Q9Y5F2 RNU6-274P-201ENST00000459566 107 ntBASIC1.71□□□□□ -2.14
PCDHB11Q9Y5F2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.71□□□□□ -2.14
PCDHB11Q9Y5F2 RNU6-135P-201ENST00000516769 101 ntBASIC1.71□□□□□ -2.14
PCDHB11Q9Y5F2 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.14
PCDHB11Q9Y5F2 AL136317.1-201ENST00000612653 226 ntBASIC1.71□□□□□ -2.14
PCDHB11Q9Y5F2 MIR4773-1-201ENST00000637203 78 ntBASIC1.71□□□□□ -2.14
PCDHB11Q9Y5F2 RNA5SP327-201ENST00000362494 101 ntBASIC1.7□□□□□ -2.14
PCDHB11Q9Y5F2 MIR617-201ENST00000385030 97 ntBASIC1.7□□□□□ -2.14
PCDHB11Q9Y5F2 SNORA17.3-201ENST00000391159 129 ntBASIC1.7□□□□□ -2.14
PCDHB11Q9Y5F2 TRMT112P2-201ENST00000512910 132 ntBASIC1.7□□□□□ -2.14
PCDHB11Q9Y5F2 RNU6-752P-201ENST00000516376 102 ntBASIC1.7□□□□□ -2.14
PCDHB11Q9Y5F2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
PCDHB11Q9Y5F2 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
PCDHB11Q9Y5F2 RNU6-382P-201ENST00000365181 106 ntBASIC1.69□□□□□ -2.14
PCDHB11Q9Y5F2 RNA5SP117-201ENST00000365294 118 ntBASIC1.69□□□□□ -2.14
PCDHB11Q9Y5F2 Y_RNA.386-201ENST00000383913 105 ntBASIC1.69□□□□□ -2.14
PCDHB11Q9Y5F2 RNU6-663P-201ENST00000391105 106 ntBASIC1.69□□□□□ -2.14
PCDHB11Q9Y5F2 RNU1-123P-201ENST00000458950 160 ntBASIC1.69□□□□□ -2.14
PCDHB11Q9Y5F2 AC125388.1-201ENST00000459631 156 ntBASIC1.69□□□□□ -2.14
PCDHB11Q9Y5F2 AL078603.1-201ENST00000603824 313 ntBASIC1.69□□□□□ -2.14
PCDHB11Q9Y5F2 U6.111-201ENST00000636093 83 ntBASIC1.69□□□□□ -2.14
PCDHB11Q9Y5F2 RNU6-321P-201ENST00000410912 106 ntBASIC1.68□□□□□ -2.14
PCDHB11Q9Y5F2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.68□□□□□ -2.14
PCDHB11Q9Y5F2 MIR8053-201ENST00000613344 75 ntBASIC1.68□□□□□ -2.14
PCDHB11Q9Y5F2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.68□□□□□ -2.14
PCDHB11Q9Y5F2 AC067863.3-201ENST00000624172 122 ntBASIC1.68□□□□□ -2.14
PCDHB11Q9Y5F2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PCDHB11Q9Y5F2 Y_RNA.340-201ENST00000365330 92 ntBASIC1.67□□□□□ -2.14
PCDHB11Q9Y5F2 SNORD89-201ENST00000390981 114 ntBASIC1.67□□□□□ -2.14
PCDHB11Q9Y5F2 FABP5P4-201ENST00000437203 171 ntBASIC1.67□□□□□ -2.14
PCDHB11Q9Y5F2 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
PCDHB11Q9Y5F2 SNORD45.1-201ENST00000363181 77 ntBASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 RNU6-800P-201ENST00000384473 103 ntBASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 MIR644A-201ENST00000385262 94 ntBASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 SNORD105-201ENST00000386910 85 ntBASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 SNORD75.2-201ENST00000408784 58 ntBASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 RNU4-62P-201ENST00000410125 130 ntBASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 AP1B1P2-201ENST00000416196 106 ntBASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 U7.7-201ENST00000459276 60 ntBASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 MIR4639-201ENST00000584938 69 ntBASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PCDHB11Q9Y5F2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
PCDHB11Q9Y5F2 SNORD45A-201ENST00000384512 84 ntBASIC1.65□□□□□ -2.15
PCDHB11Q9Y5F2 MIR19B1-201ENST00000384829 87 ntBASIC1.65□□□□□ -2.15
PCDHB11Q9Y5F2 MIR519E-201ENST00000385075 84 ntBASIC1.65□□□□□ -2.15
PCDHB11Q9Y5F2 MIR1265-201ENST00000408444 86 ntBASIC1.65□□□□□ -2.15
PCDHB11Q9Y5F2 AC244098.3-201ENST00000424803 96 ntBASIC1.65□□□□□ -2.15
PCDHB11Q9Y5F2 RNU7-24P-201ENST00000458867 62 ntBASIC1.65□□□□□ -2.15
PCDHB11Q9Y5F2 SNORD53B-201ENST00000577887 78 ntBASIC1.65□□□□□ -2.15
PCDHB11Q9Y5F2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PCDHB11Q9Y5F2 SNORD115-22-201ENST00000364456 82 ntBASIC1.64□□□□□ -2.15
PCDHB11Q9Y5F2 RNU6-895P-201ENST00000384125 103 ntBASIC1.64□□□□□ -2.15
PCDHB11Q9Y5F2 RNU6-469P-201ENST00000516253 101 ntBASIC1.64□□□□□ -2.15
PCDHB11Q9Y5F2 MIR499A-201ENST00000384903 122 ntBASIC1.63□□□□□ -2.15
PCDHB11Q9Y5F2 MIR548O2-201ENST00000616090 70 ntBASIC1.63□□□□□ -2.15
PCDHB11Q9Y5F2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.63□□□□□ -2.15
PCDHB11Q9Y5F2 RNU6-495P-201ENST00000362995 107 ntBASIC1.62□□□□□ -2.15
PCDHB11Q9Y5F2 SNORA7.1-201ENST00000363750 139 ntBASIC1.62□□□□□ -2.15
PCDHB11Q9Y5F2 SNORD28-201ENST00000384706 75 ntBASIC1.62□□□□□ -2.15
PCDHB11Q9Y5F2 RNU7-74P-201ENST00000459104 62 ntBASIC1.62□□□□□ -2.15
PCDHB11Q9Y5F2 RNU6-881P-201ENST00000516813 102 ntBASIC1.62□□□□□ -2.15
PCDHB11Q9Y5F2 AC244669.1-204ENST00000621564 178 ntBASIC1.62□□□□□ -2.15
PCDHB11Q9Y5F2 RNU6-604P-201ENST00000390917 100 ntBASIC1.61□□□□□ -2.15
PCDHB11Q9Y5F2 MIR4303-201ENST00000581299 66 ntBASIC1.61□□□□□ -2.15
PCDHB11Q9Y5F2 MIR200A-201ENST00000384875 90 ntBASIC1.6□□□□□ -2.15
PCDHB11Q9Y5F2 SNORD41.1-201ENST00000391000 69 ntBASIC1.6□□□□□ -2.15
PCDHB11Q9Y5F2 AL691482.2-201ENST00000457453 84 ntBASIC1.6□□□□□ -2.15
PCDHB11Q9Y5F2 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
PCDHB11Q9Y5F2 MIR8070-201ENST00000616510 88 ntBASIC1.59□□□□□ -2.15
PCDHB11Q9Y5F2 SNORD18A-201ENST00000363753 72 ntBASIC1.58□□□□□ -2.16
PCDHB11Q9Y5F2 AC005520.4-201ENST00000604337 90 ntBASIC1.58□□□□□ -2.16
PCDHB11Q9Y5F2 SNORD113.1-201ENST00000363280 73 ntBASIC1.57□□□□□ -2.16
PCDHB11Q9Y5F2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.57□□□□□ -2.16
PCDHB11Q9Y5F2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.57□□□□□ -2.16
PCDHB11Q9Y5F2 SNORD26-201ENST00000384147 75 ntBASIC1.57□□□□□ -2.16
PCDHB11Q9Y5F2 MIR573-201ENST00000384964 99 ntBASIC1.57□□□□□ -2.16
PCDHB11Q9Y5F2 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
PCDHB11Q9Y5F2 RNU7-95P-201ENST00000459222 64 ntBASIC1.57□□□□□ -2.16
PCDHB11Q9Y5F2 SNORD124-201ENST00000459577 104 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms