Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.21□□□□□ -2.6
RHBDD3Q9Y3P4 SNORA63.6-201ENST00000364921 119 ntBASIC-1.21□□□□□ -2.6
RHBDD3Q9Y3P4 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.21□□□□□ -2.6
RHBDD3Q9Y3P4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.21□□□□□ -2.6
RHBDD3Q9Y3P4 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.21□□□□□ -2.6
RHBDD3Q9Y3P4 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.21□□□□□ -2.6
RHBDD3Q9Y3P4 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.21□□□□□ -2.6
RHBDD3Q9Y3P4 MIR4795-201ENST00000584182 89 ntBASIC-1.21□□□□□ -2.6
RHBDD3Q9Y3P4 MIR198-201ENST00000637333 62 ntBASIC-1.21□□□□□ -2.6
RHBDD3Q9Y3P4 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.22□□□□□ -2.6
RHBDD3Q9Y3P4 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.22□□□□□ -2.6
RHBDD3Q9Y3P4 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.22□□□□□ -2.6
RHBDD3Q9Y3P4 MIR759-201ENST00000390224 91 ntBASIC-1.22□□□□□ -2.6
RHBDD3Q9Y3P4 U3.27-201ENST00000391237 200 ntBASIC-1.22□□□□□ -2.6
RHBDD3Q9Y3P4 MIR8485-201ENST00000401372 91 ntBASIC-1.22□□□□□ -2.6
RHBDD3Q9Y3P4 SNORD127-201ENST00000458892 86 ntBASIC-1.22□□□□□ -2.6
RHBDD3Q9Y3P4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.22□□□□□ -2.6
RHBDD3Q9Y3P4 MIR3140-201ENST00000583685 90 ntBASIC-1.22□□□□□ -2.6
RHBDD3Q9Y3P4 AL353803.5-201ENST00000599815 141 ntBASIC-1.22□□□□□ -2.6
RHBDD3Q9Y3P4 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.23□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.23□□□□□ -2.61
RHBDD3Q9Y3P4 MT-TW-201ENST00000387382 68 ntBASIC-1.23□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-706P-201ENST00000517229 104 ntBASIC-1.23□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-495P-201ENST00000362995 107 ntBASIC-1.24□□□□□ -2.61
RHBDD3Q9Y3P4 SNORD38.1-201ENST00000363863 68 ntBASIC-1.24□□□□□ -2.61
RHBDD3Q9Y3P4 RNY4P28-201ENST00000365281 93 ntBASIC-1.24□□□□□ -2.61
RHBDD3Q9Y3P4 SNORA62.4-201ENST00000365504 151 ntBASIC-1.24□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-746P-201ENST00000384112 109 ntBASIC-1.24□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.24□□□□□ -2.61
RHBDD3Q9Y3P4 AL445584.3-201ENST00000617173 78 ntBASIC-1.24□□□□□ -2.61
RHBDD3Q9Y3P4 U6.96-201ENST00000636425 70 ntBASIC-1.24□□□□□ -2.61
RHBDD3Q9Y3P4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.24□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.25□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.25□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.25□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.25□□□□□ -2.61
RHBDD3Q9Y3P4 RNU2-51P-201ENST00000410708 197 ntBASIC-1.25□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.25□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.25□□□□□ -2.61
RHBDD3Q9Y3P4 MIR6844-201ENST00000637122 62 ntBASIC-1.25□□□□□ -2.61
RHBDD3Q9Y3P4 MTND4P29-201ENST00000503122 1372 ntBASIC-1.25□□□□□ -2.61
RHBDD3Q9Y3P4 MIR335-201ENST00000362173 94 ntBASIC-1.26□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.26□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.26□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.26□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.26□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-132P-201ENST00000383863 107 ntBASIC-1.26□□□□□ -2.61
RHBDD3Q9Y3P4 SNORA75.5-201ENST00000391291 81 ntBASIC-1.26□□□□□ -2.61
RHBDD3Q9Y3P4 RBMX2P4-201ENST00000441256 376 ntBASIC-1.26□□□□□ -2.61
RHBDD3Q9Y3P4 MIR4680-201ENST00000580906 66 ntBASIC-1.26□□□□□ -2.61
RHBDD3Q9Y3P4 AC025521.1-201ENST00000621624 286 ntBASIC-1.26□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-363P-201ENST00000362895 105 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 SNORD18B-201ENST00000365659 72 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 MTND1P19-201ENST00000511780 315 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 AC021146.9-201ENST00000512503 156 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 SNORD63.1-201ENST00000516178 80 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 RNA5SP180-201ENST00000516181 101 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-479P-201ENST00000516348 105 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 RNU6-988P-201ENST00000519081 107 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 MIR3163-201ENST00000581592 73 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 AC138207.3-201ENST00000585289 166 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 MIR3658-201ENST00000636291 56 ntBASIC-1.27□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.28□□□□□ -2.61
RHBDD3Q9Y3P4 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.28□□□□□ -2.61
RHBDD3Q9Y3P4 RNU7-85P-201ENST00000458851 63 ntBASIC-1.28□□□□□ -2.61
RHBDD3Q9Y3P4 AL160413.1-201ENST00000622780 310 ntBASIC-1.29□□□□□ -2.62
RHBDD3Q9Y3P4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.29□□□□□ -2.62
RHBDD3Q9Y3P4 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.3□□□□□ -2.62
RHBDD3Q9Y3P4 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.3□□□□□ -2.62
RHBDD3Q9Y3P4 SNORA24B-201ENST00000384176 131 ntBASIC-1.3□□□□□ -2.62
RHBDD3Q9Y3P4 MIR548P-201ENST00000408336 84 ntBASIC-1.3□□□□□ -2.62
RHBDD3Q9Y3P4 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.3□□□□□ -2.62
RHBDD3Q9Y3P4 MIR4536-1-201ENST00000583537 88 ntBASIC-1.3□□□□□ -2.62
RHBDD3Q9Y3P4 U4.2-201ENST00000618561 85 ntBASIC-1.3□□□□□ -2.62
RHBDD3Q9Y3P4 SNORD115-22-201ENST00000364456 82 ntBASIC-1.31□□□□□ -2.62
RHBDD3Q9Y3P4 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.31□□□□□ -2.62
RHBDD3Q9Y3P4 SNORD90-201ENST00000391145 111 ntBASIC-1.31□□□□□ -2.62
RHBDD3Q9Y3P4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
RHBDD3Q9Y3P4 MIR1285-2-201ENST00000408311 88 ntBASIC-1.31□□□□□ -2.62
RHBDD3Q9Y3P4 MIR1302-6-201ENST00000408466 90 ntBASIC-1.31□□□□□ -2.62
RHBDD3Q9Y3P4 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.31□□□□□ -2.62
RHBDD3Q9Y3P4 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.31□□□□□ -2.62
RHBDD3Q9Y3P4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.31□□□□□ -2.62
RHBDD3Q9Y3P4 AL442128.1-201ENST00000615151 90 ntBASIC-1.31□□□□□ -2.62
RHBDD3Q9Y3P4 SNORA63.2-201ENST00000362603 126 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 SNORA33.1-201ENST00000364957 130 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 SNORD50.2-201ENST00000365465 70 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 MIR1255B2-201ENST00000408618 67 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 RNU6-65P-201ENST00000516332 98 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 RNA5SP147-201ENST00000516493 109 ntBASIC-1.32□□□□□ -2.62
RHBDD3Q9Y3P4 MIR3121-201ENST00000579680 77 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms