Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HPS5Q9UPZ3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HPS5Q9UPZ3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HPS5Q9UPZ3 SNORD60.1-201ENST00000362451 73 ntBASIC2.34□□□□□ -2.03
HPS5Q9UPZ3 SNORA2.1-201ENST00000363089 137 ntBASIC2.34□□□□□ -2.03
HPS5Q9UPZ3 RNU6-302P-201ENST00000365249 107 ntBASIC2.34□□□□□ -2.03
HPS5Q9UPZ3 RNU7-102P-201ENST00000458948 62 ntBASIC2.34□□□□□ -2.03
HPS5Q9UPZ3 AC027335.2-201ENST00000624030 375 ntBASIC2.34□□□□□ -2.03
HPS5Q9UPZ3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HPS5Q9UPZ3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HPS5Q9UPZ3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HPS5Q9UPZ3 MIR938-201ENST00000401216 83 ntBASIC2.33□□□□□ -2.04
HPS5Q9UPZ3 SNORA25.15-201ENST00000516487 89 ntBASIC2.33□□□□□ -2.04
HPS5Q9UPZ3 RNU6-165P-201ENST00000517170 99 ntBASIC2.33□□□□□ -2.04
HPS5Q9UPZ3 SNORA40.17-201ENST00000517256 115 ntBASIC2.33□□□□□ -2.04
HPS5Q9UPZ3 MIR8063-201ENST00000621930 81 ntBASIC2.33□□□□□ -2.04
HPS5Q9UPZ3 RNU6-42P-201ENST00000384165 107 ntBASIC2.32□□□□□ -2.04
HPS5Q9UPZ3 AC067940.1-201ENST00000458411 300 ntBASIC2.32□□□□□ -2.04
HPS5Q9UPZ3 SNORD42B-201ENST00000458893 67 ntBASIC2.32□□□□□ -2.04
HPS5Q9UPZ3 RNU7-161P-201ENST00000517289 62 ntBASIC2.32□□□□□ -2.04
HPS5Q9UPZ3 MIR6779-201ENST00000617283 64 ntBASIC2.32□□□□□ -2.04
HPS5Q9UPZ3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
HPS5Q9UPZ3 MIR302D-201ENST00000362275 68 ntBASIC2.31□□□□□ -2.04
HPS5Q9UPZ3 SNORD115-24-201ENST00000363528 82 ntBASIC2.31□□□□□ -2.04
HPS5Q9UPZ3 RNA5SP37-201ENST00000365420 130 ntBASIC2.31□□□□□ -2.04
HPS5Q9UPZ3 MIR519E-201ENST00000385075 84 ntBASIC2.31□□□□□ -2.04
HPS5Q9UPZ3 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
HPS5Q9UPZ3 RNU4-88P-201ENST00000411220 86 ntBASIC2.31□□□□□ -2.04
HPS5Q9UPZ3 MIR6739-201ENST00000622461 75 ntBASIC2.31□□□□□ -2.04
HPS5Q9UPZ3 Y_RNA.32-201ENST00000362589 110 ntBASIC2.3□□□□□ -2.04
HPS5Q9UPZ3 SNORD111-201ENST00000408139 94 ntBASIC2.3□□□□□ -2.04
HPS5Q9UPZ3 AC106800.4-201ENST00000614905 153 ntBASIC2.3□□□□□ -2.04
HPS5Q9UPZ3 RMST_2.1-201ENST00000617263 136 ntBASIC2.3□□□□□ -2.04
HPS5Q9UPZ3 SNORA75.2-201ENST00000391138 150 ntBASIC2.29□□□□□ -2.04
HPS5Q9UPZ3 SNORA75.3-201ENST00000391231 150 ntBASIC2.29□□□□□ -2.04
HPS5Q9UPZ3 SNORA31.14-201ENST00000516728 116 ntBASIC2.29□□□□□ -2.04
HPS5Q9UPZ3 RNU1-40P-201ENST00000516816 164 ntBASIC2.29□□□□□ -2.04
HPS5Q9UPZ3 RNU1-97P-201ENST00000516872 164 ntBASIC2.29□□□□□ -2.04
HPS5Q9UPZ3 MIR4303-201ENST00000581299 66 ntBASIC2.29□□□□□ -2.04
HPS5Q9UPZ3 MIR548V-201ENST00000584165 80 ntBASIC2.29□□□□□ -2.04
HPS5Q9UPZ3 AL773524.1-201ENST00000614065 229 ntBASIC2.29□□□□□ -2.04
HPS5Q9UPZ3 uc_338.16-201ENST00000621804 95 ntBASIC2.29□□□□□ -2.04
HPS5Q9UPZ3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
HPS5Q9UPZ3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HPS5Q9UPZ3 RNU6-1312P-201ENST00000362425 108 ntBASIC2.28□□□□□ -2.04
HPS5Q9UPZ3 RNU6V-201ENST00000384105 107 ntBASIC2.28□□□□□ -2.04
HPS5Q9UPZ3 MIR4804-201ENST00000581683 73 ntBASIC2.28□□□□□ -2.04
HPS5Q9UPZ3 SNORD114-26-201ENST00000363543 72 ntBASIC2.27□□□□□ -2.05
HPS5Q9UPZ3 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
HPS5Q9UPZ3 RNA5SP147-201ENST00000516493 109 ntBASIC2.27□□□□□ -2.05
HPS5Q9UPZ3 AC019176.1-201ENST00000518519 225 ntBASIC2.27□□□□□ -2.05
HPS5Q9UPZ3 MIR4713-201ENST00000582691 75 ntBASIC2.27□□□□□ -2.05
HPS5Q9UPZ3 RNU6-990P-201ENST00000364385 104 ntBASIC2.26□□□□□ -2.05
HPS5Q9UPZ3 SNORD1A-201ENST00000364968 72 ntBASIC2.26□□□□□ -2.05
HPS5Q9UPZ3 Y_RNA.379-201ENST00000365653 102 ntBASIC2.26□□□□□ -2.05
HPS5Q9UPZ3 RNU7-104P-201ENST00000459398 79 ntBASIC2.26□□□□□ -2.05
HPS5Q9UPZ3 Y_RNA.174-201ENST00000363781 105 ntBASIC2.25□□□□□ -2.05
HPS5Q9UPZ3 Y_RNA.327-201ENST00000365201 102 ntBASIC2.25□□□□□ -2.05
HPS5Q9UPZ3 AC003989.2-201ENST00000440224 169 ntBASIC2.25□□□□□ -2.05
HPS5Q9UPZ3 RNU7-56P-201ENST00000458744 62 ntBASIC2.25□□□□□ -2.05
HPS5Q9UPZ3 RNU7-95P-201ENST00000459222 64 ntBASIC2.25□□□□□ -2.05
HPS5Q9UPZ3 AC048334.1-201ENST00000477975 159 ntBASIC2.25□□□□□ -2.05
HPS5Q9UPZ3 RNU6-392P-201ENST00000364926 101 ntBASIC2.24□□□□□ -2.05
HPS5Q9UPZ3 SNORA67.5-201ENST00000391036 107 ntBASIC2.24□□□□□ -2.05
HPS5Q9UPZ3 RNU1-123P-201ENST00000458950 160 ntBASIC2.24□□□□□ -2.05
HPS5Q9UPZ3 AC079140.2-201ENST00000506193 142 ntBASIC2.24□□□□□ -2.05
HPS5Q9UPZ3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.24□□□□□ -2.05
HPS5Q9UPZ3 AC023827.1-201ENST00000569247 97 ntBASIC2.24□□□□□ -2.05
HPS5Q9UPZ3 MIR4452-201ENST00000583004 71 ntBASIC2.24□□□□□ -2.05
HPS5Q9UPZ3 MIR6734-201ENST00000621166 68 ntBASIC2.24□□□□□ -2.05
HPS5Q9UPZ3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
HPS5Q9UPZ3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 RNU4-52P-201ENST00000384209 138 ntBASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 RNU6-1065P-201ENST00000384513 106 ntBASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 MIR630-201ENST00000384957 97 ntBASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 RNU1-119P-201ENST00000391122 165 ntBASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 snoU13.9-201ENST00000458927 103 ntBASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 RNA5SP220-201ENST00000516298 104 ntBASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 MIR8081-201ENST00000611533 95 ntBASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 AC084768.2-201ENST00000622736 221 ntBASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HPS5Q9UPZ3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
HPS5Q9UPZ3 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
HPS5Q9UPZ3 AL157398.1-201ENST00000452981 186 ntBASIC2.22□□□□□ -2.05
HPS5Q9UPZ3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.22□□□□□ -2.05
HPS5Q9UPZ3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.22□□□□□ -2.05
HPS5Q9UPZ3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HPS5Q9UPZ3 SNORD33-201ENST00000362761 85 ntBASIC2.21□□□□□ -2.06
HPS5Q9UPZ3 MIR17-201ENST00000385012 84 ntBASIC2.21□□□□□ -2.06
HPS5Q9UPZ3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HPS5Q9UPZ3 AL512310.8-201ENST00000550183 120 ntBASIC2.21□□□□□ -2.06
HPS5Q9UPZ3 MIR3937-201ENST00000580135 106 ntBASIC2.21□□□□□ -2.06
HPS5Q9UPZ3 AC067863.3-201ENST00000624172 122 ntBASIC2.21□□□□□ -2.06
HPS5Q9UPZ3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
HPS5Q9UPZ3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
HPS5Q9UPZ3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HPS5Q9UPZ3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms