Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 MIR6767-201ENST00000637302 66 ntBASIC1.02□□□□□ -2.25
LRIT1Q9P2V4 RNU6-811P-201ENST00000384069 107 ntBASIC1.01□□□□□ -2.25
LRIT1Q9P2V4 SNORD105-201ENST00000386910 85 ntBASIC1.01□□□□□ -2.25
LRIT1Q9P2V4 MIR942-201ENST00000401111 86 ntBASIC1.01□□□□□ -2.25
LRIT1Q9P2V4 MIR1236-201ENST00000408340 102 ntBASIC1.01□□□□□ -2.25
LRIT1Q9P2V4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.01□□□□□ -2.25
LRIT1Q9P2V4 AC002350.1-201ENST00000490759 375 ntBASIC1.01□□□□□ -2.25
LRIT1Q9P2V4 SNORA25.13-201ENST00000516395 103 ntBASIC1.01□□□□□ -2.25
LRIT1Q9P2V4 Y_RNA.316-201ENST00000365118 111 ntBASIC1□□□□□ -2.25
LRIT1Q9P2V4 RNU6-652P-201ENST00000365488 107 ntBASIC1□□□□□ -2.25
LRIT1Q9P2V4 MIR644A-201ENST00000385262 94 ntBASIC1□□□□□ -2.25
LRIT1Q9P2V4 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
LRIT1Q9P2V4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1□□□□□ -2.25
LRIT1Q9P2V4 U7.7-201ENST00000459276 60 ntBASIC1□□□□□ -2.25
LRIT1Q9P2V4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
LRIT1Q9P2V4 SNORA18.5-201ENST00000516616 101 ntBASIC1□□□□□ -2.25
LRIT1Q9P2V4 MIR4796-201ENST00000580742 81 ntBASIC1□□□□□ -2.25
LRIT1Q9P2V4 MIR3202-2-201ENST00000635980 79 ntBASIC1□□□□□ -2.25
LRIT1Q9P2V4 FABP5P4-201ENST00000437203 171 ntBASIC0.99□□□□□ -2.25
LRIT1Q9P2V4 RNU7-161P-201ENST00000517289 62 ntBASIC0.99□□□□□ -2.25
LRIT1Q9P2V4 MIR4696-201ENST00000581431 70 ntBASIC0.99□□□□□ -2.25
LRIT1Q9P2V4 MTRNR2L2-201ENST00000604882 87 ntBASIC0.99□□□□□ -2.25
LRIT1Q9P2V4 AL136317.1-201ENST00000612653 226 ntBASIC0.99□□□□□ -2.25
LRIT1Q9P2V4 Y_RNA.491-201ENST00000384417 107 ntBASIC0.98□□□□□ -2.25
LRIT1Q9P2V4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
LRIT1Q9P2V4 RNA5SP255-201ENST00000516370 107 ntBASIC0.98□□□□□ -2.25
LRIT1Q9P2V4 Y_RNA.685-201ENST00000516532 108 ntBASIC0.98□□□□□ -2.25
LRIT1Q9P2V4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
LRIT1Q9P2V4 Y_RNA.94-201ENST00000363068 106 ntBASIC0.97□□□□□ -2.25
LRIT1Q9P2V4 RNU6-478P-201ENST00000363904 110 ntBASIC0.97□□□□□ -2.25
LRIT1Q9P2V4 AL450471.1-201ENST00000447509 127 ntBASIC0.97□□□□□ -2.25
LRIT1Q9P2V4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
LRIT1Q9P2V4 RNU6-664P-201ENST00000362381 107 ntBASIC0.96□□□□□ -2.26
LRIT1Q9P2V4 RNU6-624P-201ENST00000363411 107 ntBASIC0.96□□□□□ -2.26
LRIT1Q9P2V4 SNORD115-24-201ENST00000363528 82 ntBASIC0.96□□□□□ -2.26
LRIT1Q9P2V4 RNA5SP403-201ENST00000363598 108 ntBASIC0.96□□□□□ -2.26
LRIT1Q9P2V4 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
LRIT1Q9P2V4 MIR573-201ENST00000384964 99 ntBASIC0.96□□□□□ -2.26
LRIT1Q9P2V4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.96□□□□□ -2.26
LRIT1Q9P2V4 RN7SL793P-201ENST00000583259 296 ntBASIC0.96□□□□□ -2.26
LRIT1Q9P2V4 SNORD115-37-201ENST00000363768 82 ntBASIC0.95□□□□□ -2.26
LRIT1Q9P2V4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.95□□□□□ -2.26
LRIT1Q9P2V4 SNORD101-201ENST00000384027 73 ntBASIC0.95□□□□□ -2.26
LRIT1Q9P2V4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.95□□□□□ -2.26
LRIT1Q9P2V4 MIR548AG2-201ENST00000581228 64 ntBASIC0.95□□□□□ -2.26
LRIT1Q9P2V4 Y_RNA.207-201ENST00000364142 106 ntBASIC0.94□□□□□ -2.26
LRIT1Q9P2V4 RNU6-279P-201ENST00000391297 101 ntBASIC0.94□□□□□ -2.26
LRIT1Q9P2V4 SNORD99-201ENST00000408612 74 ntBASIC0.94□□□□□ -2.26
LRIT1Q9P2V4 Y_RNA.596-201ENST00000410462 109 ntBASIC0.94□□□□□ -2.26
LRIT1Q9P2V4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.94□□□□□ -2.26
LRIT1Q9P2V4 MIR3612-201ENST00000579753 87 ntBASIC0.94□□□□□ -2.26
LRIT1Q9P2V4 MIR4712-201ENST00000583750 82 ntBASIC0.94□□□□□ -2.26
LRIT1Q9P2V4 MIR373-201ENST00000362273 69 ntBASIC0.93□□□□□ -2.26
LRIT1Q9P2V4 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
LRIT1Q9P2V4 MIR216A-201ENST00000385063 110 ntBASIC0.93□□□□□ -2.26
LRIT1Q9P2V4 MIR548U-201ENST00000390728 81 ntBASIC0.93□□□□□ -2.26
LRIT1Q9P2V4 AC244098.3-201ENST00000424803 96 ntBASIC0.93□□□□□ -2.26
LRIT1Q9P2V4 snoU13.17-201ENST00000458802 104 ntBASIC0.93□□□□□ -2.26
LRIT1Q9P2V4 RNU6-857P-201ENST00000515893 110 ntBASIC0.93□□□□□ -2.26
LRIT1Q9P2V4 MIR3140-201ENST00000583685 90 ntBASIC0.93□□□□□ -2.26
LRIT1Q9P2V4 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
LRIT1Q9P2V4 MIR6857-201ENST00000613267 93 ntBASIC0.93□□□□□ -2.26
LRIT1Q9P2V4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
LRIT1Q9P2V4 SNORA63.2-201ENST00000362603 126 ntBASIC0.92□□□□□ -2.26
LRIT1Q9P2V4 SNORD18A-201ENST00000363753 72 ntBASIC0.92□□□□□ -2.26
LRIT1Q9P2V4 RNA5SP117-201ENST00000365294 118 ntBASIC0.92□□□□□ -2.26
LRIT1Q9P2V4 RNA5SP436-201ENST00000516020 115 ntBASIC0.92□□□□□ -2.26
LRIT1Q9P2V4 RNU6-287P-201ENST00000516230 98 ntBASIC0.92□□□□□ -2.26
LRIT1Q9P2V4 RNU6-638P-201ENST00000516582 104 ntBASIC0.92□□□□□ -2.26
LRIT1Q9P2V4 MIR5000-201ENST00000577717 103 ntBASIC0.92□□□□□ -2.26
LRIT1Q9P2V4 MIR3920-201ENST00000581751 86 ntBASIC0.92□□□□□ -2.26
LRIT1Q9P2V4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
LRIT1Q9P2V4 Y_RNA.239-201ENST00000364444 113 ntBASIC0.91□□□□□ -2.26
LRIT1Q9P2V4 SNORD28-201ENST00000384706 75 ntBASIC0.91□□□□□ -2.26
LRIT1Q9P2V4 RNU7-104P-201ENST00000459398 79 ntBASIC0.91□□□□□ -2.26
LRIT1Q9P2V4 AC011195.1-201ENST00000578177 177 ntBASIC0.91□□□□□ -2.26
LRIT1Q9P2V4 MIR3678-201ENST00000578455 94 ntBASIC0.91□□□□□ -2.26
LRIT1Q9P2V4 MIR3973-201ENST00000579824 107 ntBASIC0.91□□□□□ -2.26
LRIT1Q9P2V4 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.91□□□□□ -2.26
LRIT1Q9P2V4 AC244669.1-204ENST00000621564 178 ntBASIC0.91□□□□□ -2.26
LRIT1Q9P2V4 RNU6-161P-201ENST00000363051 106 ntBASIC0.9□□□□□ -2.27
LRIT1Q9P2V4 RNU6-1051P-201ENST00000365471 102 ntBASIC0.9□□□□□ -2.27
LRIT1Q9P2V4 RNU6-1108P-201ENST00000516308 104 ntBASIC0.9□□□□□ -2.27
LRIT1Q9P2V4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.89□□□□□ -2.27
LRIT1Q9P2V4 RNU6-129P-201ENST00000391022 107 ntBASIC0.89□□□□□ -2.27
LRIT1Q9P2V4 RNU6-1052P-201ENST00000411398 104 ntBASIC0.89□□□□□ -2.27
LRIT1Q9P2V4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
LRIT1Q9P2V4 RNU6-719P-201ENST00000516671 104 ntBASIC0.89□□□□□ -2.27
LRIT1Q9P2V4 AC025627.3-201ENST00000582078 182 ntBASIC0.89□□□□□ -2.27
LRIT1Q9P2V4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.89□□□□□ -2.27
LRIT1Q9P2V4 MIR18A-201ENST00000362310 71 ntBASIC0.88□□□□□ -2.27
LRIT1Q9P2V4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.88□□□□□ -2.27
LRIT1Q9P2V4 Y_RNA.244-201ENST00000364484 109 ntBASIC0.88□□□□□ -2.27
LRIT1Q9P2V4 RNY1P8-201ENST00000383970 114 ntBASIC0.88□□□□□ -2.27
LRIT1Q9P2V4 SNORA24B-201ENST00000384176 131 ntBASIC0.88□□□□□ -2.27
LRIT1Q9P2V4 Y_RNA.532-201ENST00000384590 113 ntBASIC0.88□□□□□ -2.27
LRIT1Q9P2V4 MIR451A-201ENST00000385059 72 ntBASIC0.88□□□□□ -2.27
LRIT1Q9P2V4 RNU6-935P-201ENST00000410371 100 ntBASIC0.88□□□□□ -2.27
LRIT1Q9P2V4 MIR2113-201ENST00000459007 91 ntBASIC0.88□□□□□ -2.27
LRIT1Q9P2V4 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms