Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU6-235P-201ENST00000362644 107 ntBASIC-0.41□□□□□ -2.48
KLHL28Q9NXS3 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.41□□□□□ -2.48
KLHL28Q9NXS3 snoU13.11-201ENST00000459219 104 ntBASIC-0.41□□□□□ -2.48
KLHL28Q9NXS3 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.41□□□□□ -2.48
KLHL28Q9NXS3 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.41□□□□□ -2.48
KLHL28Q9NXS3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.41□□□□□ -2.48
KLHL28Q9NXS3 U7.2-201ENST00000607576 63 ntBASIC-0.41□□□□□ -2.48
KLHL28Q9NXS3 AL590491.3-201ENST00000610731 82 ntBASIC-0.41□□□□□ -2.48
KLHL28Q9NXS3 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.42□□□□□ -2.48
KLHL28Q9NXS3 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.42□□□□□ -2.48
KLHL28Q9NXS3 MIR652-201ENST00000385278 98 ntBASIC-0.42□□□□□ -2.48
KLHL28Q9NXS3 MTND5P41-201ENST00000517498 206 ntBASIC-0.42□□□□□ -2.48
KLHL28Q9NXS3 AC007012.1-201ENST00000567192 175 ntBASIC-0.42□□□□□ -2.48
KLHL28Q9NXS3 MIR4696-201ENST00000581431 70 ntBASIC-0.42□□□□□ -2.48
KLHL28Q9NXS3 MIR4263-201ENST00000584745 83 ntBASIC-0.42□□□□□ -2.48
KLHL28Q9NXS3 AL442128.1-201ENST00000615151 90 ntBASIC-0.42□□□□□ -2.48
KLHL28Q9NXS3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.42□□□□□ -2.48
KLHL28Q9NXS3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.43□□□□□ -2.48
KLHL28Q9NXS3 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
KLHL28Q9NXS3 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.43□□□□□ -2.48
KLHL28Q9NXS3 RNU6-816P-201ENST00000390914 107 ntBASIC-0.43□□□□□ -2.48
KLHL28Q9NXS3 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.43□□□□□ -2.48
KLHL28Q9NXS3 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.43□□□□□ -2.48
KLHL28Q9NXS3 AC096531.1-201ENST00000419107 107 ntBASIC-0.43□□□□□ -2.48
KLHL28Q9NXS3 RNU6-758P-201ENST00000516292 89 ntBASIC-0.43□□□□□ -2.48
KLHL28Q9NXS3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.43□□□□□ -2.48
KLHL28Q9NXS3 RNU6-664P-201ENST00000362381 107 ntBASIC-0.44□□□□□ -2.48
KLHL28Q9NXS3 SNORD58C-201ENST00000365223 64 ntBASIC-0.44□□□□□ -2.48
KLHL28Q9NXS3 SNORD101-201ENST00000384027 73 ntBASIC-0.44□□□□□ -2.48
KLHL28Q9NXS3 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.44□□□□□ -2.48
KLHL28Q9NXS3 RNU6-455P-201ENST00000384681 107 ntBASIC-0.44□□□□□ -2.48
KLHL28Q9NXS3 MIR604-201ENST00000384880 94 ntBASIC-0.44□□□□□ -2.48
KLHL28Q9NXS3 Z95118.1-201ENST00000421372 247 ntBASIC-0.44□□□□□ -2.48
KLHL28Q9NXS3 AC025166.1-201ENST00000612411 163 ntBASIC-0.44□□□□□ -2.48
KLHL28Q9NXS3 MTND5P18-201ENST00000445624 1801 ntBASIC-0.44□□□□□ -2.48
KLHL28Q9NXS3 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.45□□□□□ -2.48
KLHL28Q9NXS3 RNY4P6-201ENST00000363667 96 ntBASIC-0.45□□□□□ -2.48
KLHL28Q9NXS3 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.45□□□□□ -2.48
KLHL28Q9NXS3 RNU6-466P-201ENST00000391224 103 ntBASIC-0.45□□□□□ -2.48
KLHL28Q9NXS3 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.45□□□□□ -2.48
KLHL28Q9NXS3 SNORD126-201ENST00000459475 77 ntBASIC-0.45□□□□□ -2.48
KLHL28Q9NXS3 RNU6-426P-201ENST00000516464 97 ntBASIC-0.45□□□□□ -2.48
KLHL28Q9NXS3 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.45□□□□□ -2.48
KLHL28Q9NXS3 MIR20A-201ENST00000362279 71 ntBASIC-0.46□□□□□ -2.48
KLHL28Q9NXS3 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.46□□□□□ -2.48
KLHL28Q9NXS3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
KLHL28Q9NXS3 MIR548O2-201ENST00000616090 70 ntBASIC-0.46□□□□□ -2.48
KLHL28Q9NXS3 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.47□□□□□ -2.48
KLHL28Q9NXS3 SNORD14C-201ENST00000365382 88 ntBASIC-0.47□□□□□ -2.48
KLHL28Q9NXS3 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.47□□□□□ -2.48
KLHL28Q9NXS3 MIR9-2-201ENST00000384838 87 ntBASIC-0.47□□□□□ -2.48
KLHL28Q9NXS3 MIR196A2-201ENST00000385189 110 ntBASIC-0.47□□□□□ -2.48
KLHL28Q9NXS3 AP000676.1-201ENST00000533307 52 ntBASIC-0.47□□□□□ -2.48
KLHL28Q9NXS3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 RNU6-480P-201ENST00000384332 107 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 MIR577-201ENST00000385196 96 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 SNORA49-201ENST00000386157 136 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 RNA5SP25-201ENST00000410815 110 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 MTND4LP9-201ENST00000427694 174 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 AC244090.1-201ENST00000441884 93 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 RNU6-75P-201ENST00000515944 104 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 RNU6-182P-201ENST00000516970 105 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 RNU6-762P-201ENST00000517107 102 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 FTX_2.1-201ENST00000618816 94 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 AC025521.1-201ENST00000621624 286 ntBASIC-0.48□□□□□ -2.49
KLHL28Q9NXS3 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.49□□□□□ -2.49
KLHL28Q9NXS3 RNU6-54P-201ENST00000365563 107 ntBASIC-0.49□□□□□ -2.49
KLHL28Q9NXS3 RNU6-886P-201ENST00000384319 105 ntBASIC-0.49□□□□□ -2.49
KLHL28Q9NXS3 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.49□□□□□ -2.49
KLHL28Q9NXS3 RNU6-935P-201ENST00000410371 100 ntBASIC-0.49□□□□□ -2.49
KLHL28Q9NXS3 AC114755.3-201ENST00000481111 251 ntBASIC-0.49□□□□□ -2.49
KLHL28Q9NXS3 AC108676.2-201ENST00000605225 163 ntBASIC-0.49□□□□□ -2.49
KLHL28Q9NXS3 MIR8064-201ENST00000612863 90 ntBASIC-0.49□□□□□ -2.49
KLHL28Q9NXS3 AL035470.1-201ENST00000622571 220 ntBASIC-0.49□□□□□ -2.49
KLHL28Q9NXS3 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.5□□□□□ -2.49
KLHL28Q9NXS3 MIR451A-201ENST00000385059 72 ntBASIC-0.5□□□□□ -2.49
KLHL28Q9NXS3 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.5□□□□□ -2.49
KLHL28Q9NXS3 RNA5SP66-201ENST00000517178 101 ntBASIC-0.5□□□□□ -2.49
KLHL28Q9NXS3 RNU6-86P-201ENST00000606534 107 ntBASIC-0.5□□□□□ -2.49
KLHL28Q9NXS3 AC145423.2-201ENST00000610631 239 ntBASIC-0.5□□□□□ -2.49
KLHL28Q9NXS3 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 MIR582-201ENST00000365731 98 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 RNU6-772P-201ENST00000516042 105 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 MIR3613-201ENST00000579844 87 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 MIR4432-201ENST00000581823 84 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 AC096720.1-201ENST00000604441 183 ntBASIC-0.51□□□□□ -2.49
KLHL28Q9NXS3 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.52□□□□□ -2.49
KLHL28Q9NXS3 SNORD56B-201ENST00000384713 71 ntBASIC-0.52□□□□□ -2.49
KLHL28Q9NXS3 MIR216B-201ENST00000390186 82 ntBASIC-0.52□□□□□ -2.49
KLHL28Q9NXS3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.52□□□□□ -2.49
KLHL28Q9NXS3 AL445193.1-201ENST00000441183 141 ntBASIC-0.52□□□□□ -2.49
KLHL28Q9NXS3 AC097510.1-201ENST00000510945 133 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms