Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 RNU6-816P-201ENST00000390914 107 ntBASIC-0.56□□□□□ -2.5
CHCHD3Q9NX63 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.56□□□□□ -2.5
CHCHD3Q9NX63 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.56□□□□□ -2.5
CHCHD3Q9NX63 AL353813.1-201ENST00000440700 253 ntBASIC-0.56□□□□□ -2.5
CHCHD3Q9NX63 MIR20A-201ENST00000362279 71 ntBASIC-0.57□□□□□ -2.5
CHCHD3Q9NX63 RNU6-154P-201ENST00000384306 106 ntBASIC-0.57□□□□□ -2.5
CHCHD3Q9NX63 RNU6-35P-201ENST00000384530 107 ntBASIC-0.57□□□□□ -2.5
CHCHD3Q9NX63 MIR1265-201ENST00000408444 86 ntBASIC-0.57□□□□□ -2.5
CHCHD3Q9NX63 RNA5SP451-201ENST00000410588 110 ntBASIC-0.57□□□□□ -2.5
CHCHD3Q9NX63 AL670379.3-201ENST00000605040 251 ntBASIC-0.57□□□□□ -2.5
CHCHD3Q9NX63 MTND5P18-201ENST00000445624 1801 ntBASIC-0.57□□□□□ -2.5
CHCHD3Q9NX63 RNA5SP275-201ENST00000363936 118 ntBASIC-0.58□□□□□ -2.5
CHCHD3Q9NX63 U8.6-201ENST00000364939 135 ntBASIC-0.58□□□□□ -2.5
CHCHD3Q9NX63 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.58□□□□□ -2.5
CHCHD3Q9NX63 SNORD101-201ENST00000384027 73 ntBASIC-0.58□□□□□ -2.5
CHCHD3Q9NX63 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.58□□□□□ -2.5
CHCHD3Q9NX63 AC244250.2-201ENST00000418731 148 ntBASIC-0.58□□□□□ -2.5
CHCHD3Q9NX63 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.58□□□□□ -2.5
CHCHD3Q9NX63 MIR4679-2-201ENST00000578358 77 ntBASIC-0.58□□□□□ -2.5
CHCHD3Q9NX63 RNU6-957P-201ENST00000363652 99 ntBASIC-0.59□□□□□ -2.5
CHCHD3Q9NX63 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.59□□□□□ -2.5
CHCHD3Q9NX63 snosnR66.1-201ENST00000391095 99 ntBASIC-0.59□□□□□ -2.5
CHCHD3Q9NX63 RNU6-758P-201ENST00000516292 89 ntBASIC-0.59□□□□□ -2.5
CHCHD3Q9NX63 MIR4636-201ENST00000582271 80 ntBASIC-0.59□□□□□ -2.5
CHCHD3Q9NX63 MIR6507-201ENST00000613630 70 ntBASIC-0.59□□□□□ -2.5
CHCHD3Q9NX63 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.6□□□□□ -2.51
CHCHD3Q9NX63 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.6□□□□□ -2.51
CHCHD3Q9NX63 AC244090.1-201ENST00000441884 93 ntBASIC-0.6□□□□□ -2.51
CHCHD3Q9NX63 RNU6-426P-201ENST00000516464 97 ntBASIC-0.6□□□□□ -2.51
CHCHD3Q9NX63 RNU6-664P-201ENST00000362381 107 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 RNU6-235P-201ENST00000362644 107 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 MIR539-201ENST00000365690 78 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 MIR604-201ENST00000384880 94 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 SNORA40-201ENST00000388090 126 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 RNU6-935P-201ENST00000410371 100 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 AC096531.1-201ENST00000419107 107 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 SNORD2-201ENST00000459163 69 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 MIR4694-201ENST00000578534 80 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 MIR4493-201ENST00000584016 73 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 MIR4788-201ENST00000639104 80 ntBASIC-0.61□□□□□ -2.51
CHCHD3Q9NX63 MIR101-1-201ENST00000362265 75 ntBASIC-0.62□□□□□ -2.51
CHCHD3Q9NX63 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.62□□□□□ -2.51
CHCHD3Q9NX63 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.62□□□□□ -2.51
CHCHD3Q9NX63 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.62□□□□□ -2.51
CHCHD3Q9NX63 MIR4802-201ENST00000581881 80 ntBASIC-0.62□□□□□ -2.51
CHCHD3Q9NX63 MIR655-201ENST00000362159 97 ntBASIC-0.63□□□□□ -2.51
CHCHD3Q9NX63 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.63□□□□□ -2.51
CHCHD3Q9NX63 RNA5SP205-201ENST00000364653 136 ntBASIC-0.63□□□□□ -2.51
CHCHD3Q9NX63 U3.27-201ENST00000391237 200 ntBASIC-0.63□□□□□ -2.51
CHCHD3Q9NX63 AL161932.1-201ENST00000437408 146 ntBASIC-0.63□□□□□ -2.51
CHCHD3Q9NX63 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.63□□□□□ -2.51
CHCHD3Q9NX63 MIR4696-201ENST00000581431 70 ntBASIC-0.63□□□□□ -2.51
CHCHD3Q9NX63 MIR548AE1-201ENST00000583292 70 ntBASIC-0.63□□□□□ -2.51
CHCHD3Q9NX63 MIR4439-201ENST00000583746 80 ntBASIC-0.63□□□□□ -2.51
CHCHD3Q9NX63 MTND4LP9-201ENST00000427694 174 ntBASIC-0.64□□□□□ -2.51
CHCHD3Q9NX63 MTND5P41-201ENST00000517498 206 ntBASIC-0.64□□□□□ -2.51
CHCHD3Q9NX63 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.64□□□□□ -2.51
CHCHD3Q9NX63 MIR548O2-201ENST00000616090 70 ntBASIC-0.64□□□□□ -2.51
CHCHD3Q9NX63 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.65□□□□□ -2.51
CHCHD3Q9NX63 SNORD126-201ENST00000459475 77 ntBASIC-0.65□□□□□ -2.51
CHCHD3Q9NX63 RNU6-772P-201ENST00000516042 105 ntBASIC-0.65□□□□□ -2.51
CHCHD3Q9NX63 RNU7-200P-201ENST00000516105 62 ntBASIC-0.65□□□□□ -2.51
CHCHD3Q9NX63 RNU6-175P-201ENST00000516896 107 ntBASIC-0.65□□□□□ -2.51
CHCHD3Q9NX63 AL157777.2-201ENST00000258070 137 ntBASIC-0.66□□□□□ -2.52
CHCHD3Q9NX63 RNY1P5-201ENST00000383890 115 ntBASIC-0.66□□□□□ -2.52
CHCHD3Q9NX63 AL078595.1-201ENST00000404458 226 ntBASIC-0.66□□□□□ -2.52
CHCHD3Q9NX63 MIR548AZ-201ENST00000616567 95 ntBASIC-0.66□□□□□ -2.52
CHCHD3Q9NX63 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.67□□□□□ -2.52
CHCHD3Q9NX63 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.67□□□□□ -2.52
CHCHD3Q9NX63 SNORD114-4-201ENST00000363962 75 ntBASIC-0.67□□□□□ -2.52
CHCHD3Q9NX63 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.67□□□□□ -2.52
CHCHD3Q9NX63 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.67□□□□□ -2.52
CHCHD3Q9NX63 RPS29P8-201ENST00000445109 171 ntBASIC-0.67□□□□□ -2.52
CHCHD3Q9NX63 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.68□□□□□ -2.52
CHCHD3Q9NX63 MIR224-201ENST00000384889 81 ntBASIC-0.68□□□□□ -2.52
CHCHD3Q9NX63 MIR577-201ENST00000385196 96 ntBASIC-0.68□□□□□ -2.52
CHCHD3Q9NX63 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.68□□□□□ -2.52
CHCHD3Q9NX63 AL590491.3-201ENST00000610731 82 ntBASIC-0.68□□□□□ -2.52
CHCHD3Q9NX63 RNY3P2-201ENST00000362918 102 ntBASIC-0.69□□□□□ -2.52
CHCHD3Q9NX63 snoU13.11-201ENST00000459219 104 ntBASIC-0.69□□□□□ -2.52
CHCHD3Q9NX63 RNU6-832P-201ENST00000363319 107 ntBASIC-0.7□□□□□ -2.52
CHCHD3Q9NX63 RNA5SP368-201ENST00000364298 116 ntBASIC-0.7□□□□□ -2.52
CHCHD3Q9NX63 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.7□□□□□ -2.52
CHCHD3Q9NX63 RNA5SP25-201ENST00000410815 110 ntBASIC-0.7□□□□□ -2.52
CHCHD3Q9NX63 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.7□□□□□ -2.52
CHCHD3Q9NX63 RNA5SP66-201ENST00000517178 101 ntBASIC-0.7□□□□□ -2.52
CHCHD3Q9NX63 RNU6-794P-201ENST00000517261 64 ntBASIC-0.7□□□□□ -2.52
CHCHD3Q9NX63 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.71□□□□□ -2.52
CHCHD3Q9NX63 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.71□□□□□ -2.52
CHCHD3Q9NX63 RNU6-455P-201ENST00000384681 107 ntBASIC-0.71□□□□□ -2.52
CHCHD3Q9NX63 RNU6-65P-201ENST00000516332 98 ntBASIC-0.71□□□□□ -2.52
CHCHD3Q9NX63 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.71□□□□□ -2.52
CHCHD3Q9NX63 AC108676.2-201ENST00000605225 163 ntBASIC-0.71□□□□□ -2.52
CHCHD3Q9NX63 SNORD45B-201ENST00000364617 72 ntBASIC-0.72□□□□□ -2.52
CHCHD3Q9NX63 MIR652-201ENST00000385278 98 ntBASIC-0.72□□□□□ -2.52
CHCHD3Q9NX63 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.72□□□□□ -2.52
CHCHD3Q9NX63 MIR6086-201ENST00000638065 55 ntBASIC-0.72□□□□□ -2.52
CHCHD3Q9NX63 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms