Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MIR583-201ENST00000384846 75 ntBASIC1.97□□□□□ -2.09
CUEDC1Q9NWM3 MIR499A-201ENST00000384903 122 ntBASIC1.97□□□□□ -2.09
CUEDC1Q9NWM3 MIR938-201ENST00000401216 83 ntBASIC1.97□□□□□ -2.09
CUEDC1Q9NWM3 RNA5SP182-201ENST00000516064 82 ntBASIC1.97□□□□□ -2.09
CUEDC1Q9NWM3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.96□□□□□ -2.1
CUEDC1Q9NWM3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.96□□□□□ -2.1
CUEDC1Q9NWM3 RNU6-165P-201ENST00000517170 99 ntBASIC1.96□□□□□ -2.1
CUEDC1Q9NWM3 AC106800.4-201ENST00000614905 153 ntBASIC1.96□□□□□ -2.1
CUEDC1Q9NWM3 AC092634.7-201ENST00000621022 103 ntBASIC1.96□□□□□ -2.1
CUEDC1Q9NWM3 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
CUEDC1Q9NWM3 AC027335.2-201ENST00000624030 375 ntBASIC1.96□□□□□ -2.1
CUEDC1Q9NWM3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CUEDC1Q9NWM3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
CUEDC1Q9NWM3 Y_RNA.236-201ENST00000364427 111 ntBASIC1.95□□□□□ -2.1
CUEDC1Q9NWM3 RNU6-1126P-201ENST00000384002 107 ntBASIC1.95□□□□□ -2.1
CUEDC1Q9NWM3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.95□□□□□ -2.1
CUEDC1Q9NWM3 MIR6845-201ENST00000613182 61 ntBASIC1.95□□□□□ -2.1
CUEDC1Q9NWM3 MIR6509-201ENST00000614603 85 ntBASIC1.95□□□□□ -2.1
CUEDC1Q9NWM3 RNU6-940P-201ENST00000363433 104 ntBASIC1.94□□□□□ -2.1
CUEDC1Q9NWM3 AC108667.1-201ENST00000428618 249 ntBASIC1.94□□□□□ -2.1
CUEDC1Q9NWM3 AL359821.1-201ENST00000605519 182 ntBASIC1.94□□□□□ -2.1
CUEDC1Q9NWM3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
CUEDC1Q9NWM3 MIR378A-201ENST00000362177 66 ntBASIC1.93□□□□□ -2.1
CUEDC1Q9NWM3 RNA5SP403-201ENST00000363598 108 ntBASIC1.93□□□□□ -2.1
CUEDC1Q9NWM3 SNORA25.5-201ENST00000363782 126 ntBASIC1.93□□□□□ -2.1
CUEDC1Q9NWM3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.93□□□□□ -2.1
CUEDC1Q9NWM3 RNU7-102P-201ENST00000458948 62 ntBASIC1.93□□□□□ -2.1
CUEDC1Q9NWM3 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
CUEDC1Q9NWM3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.92□□□□□ -2.1
CUEDC1Q9NWM3 MIR7-2-201ENST00000384970 110 ntBASIC1.92□□□□□ -2.1
CUEDC1Q9NWM3 MIR617-201ENST00000385030 97 ntBASIC1.92□□□□□ -2.1
CUEDC1Q9NWM3 RNU6-321P-201ENST00000410912 106 ntBASIC1.92□□□□□ -2.1
CUEDC1Q9NWM3 RNU7-40P-201ENST00000516397 64 ntBASIC1.92□□□□□ -2.1
CUEDC1Q9NWM3 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
CUEDC1Q9NWM3 MIR548O2-201ENST00000616090 70 ntBASIC1.92□□□□□ -2.1
CUEDC1Q9NWM3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CUEDC1Q9NWM3 SNORA75.2-201ENST00000391138 150 ntBASIC1.91□□□□□ -2.1
CUEDC1Q9NWM3 SNORA75.3-201ENST00000391231 150 ntBASIC1.91□□□□□ -2.1
CUEDC1Q9NWM3 MIR548AG2-201ENST00000581228 64 ntBASIC1.91□□□□□ -2.1
CUEDC1Q9NWM3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CUEDC1Q9NWM3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CUEDC1Q9NWM3 SCARNA21.1-201ENST00000515996 128 ntBASIC1.9□□□□□ -2.11
CUEDC1Q9NWM3 MIR466-201ENST00000580653 84 ntBASIC1.9□□□□□ -2.11
CUEDC1Q9NWM3 MIR4804-201ENST00000581683 73 ntBASIC1.9□□□□□ -2.11
CUEDC1Q9NWM3 MIR8070-201ENST00000616510 88 ntBASIC1.9□□□□□ -2.11
CUEDC1Q9NWM3 NAMPTP3-201ENST00000569273 224 ntBASIC1.89□□□□□ -2.11
CUEDC1Q9NWM3 RNA5SP215-201ENST00000363440 122 ntBASIC1.88□□□□□ -2.11
CUEDC1Q9NWM3 SNORD115-24-201ENST00000363528 82 ntBASIC1.88□□□□□ -2.11
CUEDC1Q9NWM3 RNU6-645P-201ENST00000364649 106 ntBASIC1.88□□□□□ -2.11
CUEDC1Q9NWM3 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
CUEDC1Q9NWM3 AL591704.2-201ENST00000421658 181 ntBASIC1.88□□□□□ -2.11
CUEDC1Q9NWM3 AC048334.1-201ENST00000477975 159 ntBASIC1.88□□□□□ -2.11
CUEDC1Q9NWM3 MIR3657-201ENST00000584818 117 ntBASIC1.88□□□□□ -2.11
CUEDC1Q9NWM3 uc_338.16-201ENST00000621804 95 ntBASIC1.88□□□□□ -2.11
CUEDC1Q9NWM3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
CUEDC1Q9NWM3 RNU6-1079P-201ENST00000362861 110 ntBASIC1.87□□□□□ -2.11
CUEDC1Q9NWM3 RNU1-119P-201ENST00000391122 165 ntBASIC1.87□□□□□ -2.11
CUEDC1Q9NWM3 AC067940.1-201ENST00000458411 300 ntBASIC1.87□□□□□ -2.11
CUEDC1Q9NWM3 RNU7-56P-201ENST00000458744 62 ntBASIC1.87□□□□□ -2.11
CUEDC1Q9NWM3 snoU13.18-201ENST00000459483 104 ntBASIC1.87□□□□□ -2.11
CUEDC1Q9NWM3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
CUEDC1Q9NWM3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CUEDC1Q9NWM3 RNU6-369P-201ENST00000362515 102 ntBASIC1.86□□□□□ -2.11
CUEDC1Q9NWM3 RNA5SP192-201ENST00000364404 120 ntBASIC1.86□□□□□ -2.11
CUEDC1Q9NWM3 TRMT112P2-201ENST00000512910 132 ntBASIC1.86□□□□□ -2.11
CUEDC1Q9NWM3 SNORA31.2-201ENST00000516019 134 ntBASIC1.86□□□□□ -2.11
CUEDC1Q9NWM3 SNORA31.14-201ENST00000516728 116 ntBASIC1.86□□□□□ -2.11
CUEDC1Q9NWM3 RNU7-161P-201ENST00000517289 62 ntBASIC1.86□□□□□ -2.11
CUEDC1Q9NWM3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CUEDC1Q9NWM3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.85□□□□□ -2.11
CUEDC1Q9NWM3 RNU6-260P-201ENST00000384092 107 ntBASIC1.85□□□□□ -2.11
CUEDC1Q9NWM3 RNU7-74P-201ENST00000459104 62 ntBASIC1.85□□□□□ -2.11
CUEDC1Q9NWM3 RNU7-21P-201ENST00000459430 62 ntBASIC1.85□□□□□ -2.11
CUEDC1Q9NWM3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.85□□□□□ -2.11
CUEDC1Q9NWM3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CUEDC1Q9NWM3 SNORA2.1-201ENST00000363089 137 ntBASIC1.84□□□□□ -2.11
CUEDC1Q9NWM3 SNORA80D-201ENST00000384488 135 ntBASIC1.84□□□□□ -2.11
CUEDC1Q9NWM3 MIR203A-201ENST00000384836 110 ntBASIC1.84□□□□□ -2.11
CUEDC1Q9NWM3 MIR519E-201ENST00000385075 84 ntBASIC1.84□□□□□ -2.11
CUEDC1Q9NWM3 RNU6-994P-201ENST00000410507 111 ntBASIC1.84□□□□□ -2.11
CUEDC1Q9NWM3 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
CUEDC1Q9NWM3 AC023827.1-201ENST00000569247 97 ntBASIC1.84□□□□□ -2.11
CUEDC1Q9NWM3 RNU6-302P-201ENST00000365249 107 ntBASIC1.83□□□□□ -2.12
CUEDC1Q9NWM3 MIR489-201ENST00000384923 84 ntBASIC1.83□□□□□ -2.12
CUEDC1Q9NWM3 MIR222-201ENST00000384992 110 ntBASIC1.83□□□□□ -2.12
CUEDC1Q9NWM3 RNU6-808P-201ENST00000391233 108 ntBASIC1.83□□□□□ -2.12
CUEDC1Q9NWM3 Y_RNA.722-201ENST00000517279 114 ntBASIC1.83□□□□□ -2.12
CUEDC1Q9NWM3 RNU6-54P-201ENST00000365563 107 ntBASIC1.82□□□□□ -2.12
CUEDC1Q9NWM3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CUEDC1Q9NWM3 RNA5SP299-201ENST00000391203 116 ntBASIC1.82□□□□□ -2.12
CUEDC1Q9NWM3 RNU7-90P-201ENST00000459216 62 ntBASIC1.82□□□□□ -2.12
CUEDC1Q9NWM3 RNU6-135P-201ENST00000516769 101 ntBASIC1.82□□□□□ -2.12
CUEDC1Q9NWM3 AC067863.3-201ENST00000624172 122 ntBASIC1.82□□□□□ -2.12
CUEDC1Q9NWM3 MIR1-1-201ENST00000362147 71 ntBASIC1.81□□□□□ -2.12
CUEDC1Q9NWM3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.81□□□□□ -2.12
CUEDC1Q9NWM3 SNORA67.5-201ENST00000391036 107 ntBASIC1.81□□□□□ -2.12
CUEDC1Q9NWM3 SNORA17.3-201ENST00000391159 129 ntBASIC1.81□□□□□ -2.12
CUEDC1Q9NWM3 RNU7-104P-201ENST00000459398 79 ntBASIC1.81□□□□□ -2.12
CUEDC1Q9NWM3 RNU6-122P-201ENST00000516818 107 ntBASIC1.81□□□□□ -2.12
CUEDC1Q9NWM3 Y_RNA.250-201ENST00000364542 110 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms