Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNA5SP285-201ENST00000516619 119 ntBASIC-0.28□□□□□ -2.45
VIPAS39Q9H9C1 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.28□□□□□ -2.45
VIPAS39Q9H9C1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.28□□□□□ -2.45
VIPAS39Q9H9C1 MIR548AE1-201ENST00000583292 70 ntBASIC-0.28□□□□□ -2.45
VIPAS39Q9H9C1 MIR548A1-201ENST00000385041 97 ntBASIC-0.29□□□□□ -2.46
VIPAS39Q9H9C1 RNU6-466P-201ENST00000391224 103 ntBASIC-0.29□□□□□ -2.46
VIPAS39Q9H9C1 CR383656.4-201ENST00000546909 122 ntBASIC-0.29□□□□□ -2.46
VIPAS39Q9H9C1 AC007012.1-201ENST00000567192 175 ntBASIC-0.29□□□□□ -2.46
VIPAS39Q9H9C1 AC096720.1-201ENST00000604441 183 ntBASIC-0.29□□□□□ -2.46
VIPAS39Q9H9C1 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.3□□□□□ -2.46
VIPAS39Q9H9C1 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.3□□□□□ -2.46
VIPAS39Q9H9C1 MIR539-201ENST00000365690 78 ntBASIC-0.3□□□□□ -2.46
VIPAS39Q9H9C1 MIR214-201ENST00000385214 110 ntBASIC-0.3□□□□□ -2.46
VIPAS39Q9H9C1 AC109327.2-201ENST00000448339 378 ntBASIC-0.3□□□□□ -2.46
VIPAS39Q9H9C1 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.3□□□□□ -2.46
VIPAS39Q9H9C1 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.3□□□□□ -2.46
VIPAS39Q9H9C1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.3□□□□□ -2.46
VIPAS39Q9H9C1 RNU6-86P-201ENST00000606534 107 ntBASIC-0.3□□□□□ -2.46
VIPAS39Q9H9C1 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.31□□□□□ -2.46
VIPAS39Q9H9C1 SNORD101-201ENST00000384027 73 ntBASIC-0.31□□□□□ -2.46
VIPAS39Q9H9C1 RNU6-480P-201ENST00000384332 107 ntBASIC-0.31□□□□□ -2.46
VIPAS39Q9H9C1 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.31□□□□□ -2.46
VIPAS39Q9H9C1 SNORD4A-201ENST00000459174 72 ntBASIC-0.31□□□□□ -2.46
VIPAS39Q9H9C1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.31□□□□□ -2.46
VIPAS39Q9H9C1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.32□□□□□ -2.46
VIPAS39Q9H9C1 U8.6-201ENST00000364939 135 ntBASIC-0.32□□□□□ -2.46
VIPAS39Q9H9C1 RNY1P5-201ENST00000383890 115 ntBASIC-0.32□□□□□ -2.46
VIPAS39Q9H9C1 MT-TY-201ENST00000387409 66 ntBASIC-0.32□□□□□ -2.46
VIPAS39Q9H9C1 RNU6-664P-201ENST00000362381 107 ntBASIC-0.33□□□□□ -2.46
VIPAS39Q9H9C1 RNU6-832P-201ENST00000363319 107 ntBASIC-0.33□□□□□ -2.46
VIPAS39Q9H9C1 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.33□□□□□ -2.46
VIPAS39Q9H9C1 RNU6-154P-201ENST00000384306 106 ntBASIC-0.33□□□□□ -2.46
VIPAS39Q9H9C1 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.33□□□□□ -2.46
VIPAS39Q9H9C1 AC068339.1-201ENST00000526965 141 ntBASIC-0.33□□□□□ -2.46
VIPAS39Q9H9C1 MIR4696-201ENST00000581431 70 ntBASIC-0.33□□□□□ -2.46
VIPAS39Q9H9C1 AC025521.1-201ENST00000621624 286 ntBASIC-0.33□□□□□ -2.46
VIPAS39Q9H9C1 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.34□□□□□ -2.46
VIPAS39Q9H9C1 RNU6-46P-201ENST00000383860 107 ntBASIC-0.34□□□□□ -2.46
VIPAS39Q9H9C1 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.34□□□□□ -2.46
VIPAS39Q9H9C1 SNORD33.1-201ENST00000516213 88 ntBASIC-0.34□□□□□ -2.46
VIPAS39Q9H9C1 MIR4694-201ENST00000578534 80 ntBASIC-0.34□□□□□ -2.46
VIPAS39Q9H9C1 MIR3613-201ENST00000579844 87 ntBASIC-0.34□□□□□ -2.46
VIPAS39Q9H9C1 MIR3671-201ENST00000580455 88 ntBASIC-0.34□□□□□ -2.46
VIPAS39Q9H9C1 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.34□□□□□ -2.46
VIPAS39Q9H9C1 MIR6759-201ENST00000638110 65 ntBASIC-0.34□□□□□ -2.46
VIPAS39Q9H9C1 MIR4679-2-201ENST00000578358 77 ntBASIC-0.35□□□□□ -2.47
VIPAS39Q9H9C1 MIR3914-2-201ENST00000637339 95 ntBASIC-0.35□□□□□ -2.47
VIPAS39Q9H9C1 MIR148A-201ENST00000362215 68 ntBASIC-0.36□□□□□ -2.47
VIPAS39Q9H9C1 SNORD114-31-201ENST00000363219 75 ntBASIC-0.36□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.36□□□□□ -2.47
VIPAS39Q9H9C1 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.36□□□□□ -2.47
VIPAS39Q9H9C1 SNORD114-29-201ENST00000364819 70 ntBASIC-0.36□□□□□ -2.47
VIPAS39Q9H9C1 SNORD49B-201ENST00000365172 72 ntBASIC-0.36□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-209P-201ENST00000384118 107 ntBASIC-0.36□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-80P-201ENST00000384195 107 ntBASIC-0.36□□□□□ -2.47
VIPAS39Q9H9C1 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.37□□□□□ -2.47
VIPAS39Q9H9C1 RNY3P2-201ENST00000362918 102 ntBASIC-0.37□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-774P-201ENST00000363238 107 ntBASIC-0.37□□□□□ -2.47
VIPAS39Q9H9C1 MIR548A3-201ENST00000385297 97 ntBASIC-0.37□□□□□ -2.47
VIPAS39Q9H9C1 MIR6507-201ENST00000613630 70 ntBASIC-0.37□□□□□ -2.47
VIPAS39Q9H9C1 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.38□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-175P-201ENST00000516896 107 ntBASIC-0.38□□□□□ -2.47
VIPAS39Q9H9C1 MIR3133-201ENST00000583157 78 ntBASIC-0.38□□□□□ -2.47
VIPAS39Q9H9C1 MIR652-201ENST00000385278 98 ntBASIC-0.39□□□□□ -2.47
VIPAS39Q9H9C1 AC244250.2-201ENST00000418731 148 ntBASIC-0.39□□□□□ -2.47
VIPAS39Q9H9C1 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.39□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.39□□□□□ -2.47
VIPAS39Q9H9C1 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.39□□□□□ -2.47
VIPAS39Q9H9C1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.39□□□□□ -2.47
VIPAS39Q9H9C1 MIR5009-201ENST00000578736 100 ntBASIC-0.39□□□□□ -2.47
VIPAS39Q9H9C1 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-935P-201ENST00000410371 100 ntBASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-75P-201ENST00000515944 104 ntBASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-65P-201ENST00000516332 98 ntBASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-659P-201ENST00000516454 104 ntBASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 RNU6-762P-201ENST00000517107 102 ntBASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 AL513043.2-201ENST00000573941 143 ntBASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 MIR3668-201ENST00000582138 75 ntBASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 MIR4536-1-201ENST00000583537 88 ntBASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 MIR3666-201ENST00000607845 111 ntBASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.4□□□□□ -2.47
VIPAS39Q9H9C1 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.41□□□□□ -2.48
VIPAS39Q9H9C1 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.41□□□□□ -2.48
VIPAS39Q9H9C1 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.41□□□□□ -2.48
VIPAS39Q9H9C1 MIR451A-201ENST00000385059 72 ntBASIC-0.41□□□□□ -2.48
VIPAS39Q9H9C1 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.41□□□□□ -2.48
VIPAS39Q9H9C1 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.41□□□□□ -2.48
VIPAS39Q9H9C1 RNU6-719P-201ENST00000516671 104 ntBASIC-0.41□□□□□ -2.48
VIPAS39Q9H9C1 MIR4802-201ENST00000581881 80 ntBASIC-0.41□□□□□ -2.48
VIPAS39Q9H9C1 RNA5SP98-201ENST00000363158 137 ntBASIC-0.42□□□□□ -2.48
VIPAS39Q9H9C1 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.42□□□□□ -2.48
VIPAS39Q9H9C1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.42□□□□□ -2.48
VIPAS39Q9H9C1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.42□□□□□ -2.48
VIPAS39Q9H9C1 U6.95-201ENST00000636931 70 ntBASIC-0.42□□□□□ -2.48
VIPAS39Q9H9C1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
VIPAS39Q9H9C1 SNORD45B-201ENST00000364617 72 ntBASIC-0.43□□□□□ -2.48
VIPAS39Q9H9C1 SNORD50.2-201ENST00000365465 70 ntBASIC-0.43□□□□□ -2.48
VIPAS39Q9H9C1 MIR548Z-201ENST00000584743 97 ntBASIC-0.43□□□□□ -2.48
VIPAS39Q9H9C1 AC103810.7-201ENST00000607821 91 ntBASIC-0.43□□□□□ -2.48
VIPAS39Q9H9C1 MIR548O2-201ENST00000616090 70 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 2551.4 ms