Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 Y_RNA.467-201ENST00000384297 102 ntBASIC0.4□□□□□ -2.35
NUP88Q99567 RNU6-813P-201ENST00000384691 107 ntBASIC0.4□□□□□ -2.35
NUP88Q99567 SNORD41.1-201ENST00000391000 69 ntBASIC0.4□□□□□ -2.35
NUP88Q99567 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.4□□□□□ -2.35
NUP88Q99567 RNU7-74P-201ENST00000459104 62 ntBASIC0.4□□□□□ -2.35
NUP88Q99567 RNU6-1265P-201ENST00000516342 103 ntBASIC0.4□□□□□ -2.35
NUP88Q99567 RNA5SP395-201ENST00000516567 118 ntBASIC0.4□□□□□ -2.35
NUP88Q99567 AC025521.1-201ENST00000621624 286 ntBASIC0.4□□□□□ -2.35
NUP88Q99567 RNU6-957P-201ENST00000363652 99 ntBASIC0.39□□□□□ -2.35
NUP88Q99567 SNORD115-44-201ENST00000365391 82 ntBASIC0.39□□□□□ -2.35
NUP88Q99567 RNU6-904P-201ENST00000516206 101 ntBASIC0.39□□□□□ -2.35
NUP88Q99567 MIR3920-201ENST00000581751 86 ntBASIC0.39□□□□□ -2.35
NUP88Q99567 AC103810.7-201ENST00000607821 91 ntBASIC0.39□□□□□ -2.35
NUP88Q99567 AL162376.1-201ENST00000624117 175 ntBASIC0.39□□□□□ -2.35
NUP88Q99567 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
NUP88Q99567 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.39□□□□□ -2.35
NUP88Q99567 SNORA2A-201ENST00000383885 135 ntBASIC0.38□□□□□ -2.35
NUP88Q99567 RNU6-756P-201ENST00000383997 107 ntBASIC0.38□□□□□ -2.35
NUP88Q99567 RNU6-106P-201ENST00000384405 107 ntBASIC0.38□□□□□ -2.35
NUP88Q99567 MIR760-201ENST00000390220 80 ntBASIC0.38□□□□□ -2.35
NUP88Q99567 RNU6-269P-201ENST00000391077 97 ntBASIC0.38□□□□□ -2.35
NUP88Q99567 snoU13.11-201ENST00000459219 104 ntBASIC0.38□□□□□ -2.35
NUP88Q99567 AC012531.4-201ENST00000616509 177 ntBASIC0.38□□□□□ -2.35
NUP88Q99567 RNU6-509P-201ENST00000363519 107 ntBASIC0.37□□□□□ -2.35
NUP88Q99567 Y_RNA.291-201ENST00000364886 113 ntBASIC0.37□□□□□ -2.35
NUP88Q99567 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
NUP88Q99567 MIR590-201ENST00000385008 97 ntBASIC0.37□□□□□ -2.35
NUP88Q99567 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
NUP88Q99567 MIR548Z-201ENST00000584743 97 ntBASIC0.37□□□□□ -2.35
NUP88Q99567 RNU1-29P-201ENST00000606574 126 ntBASIC0.37□□□□□ -2.35
NUP88Q99567 AC073869.9-201ENST00000641610 120 ntBASIC0.37□□□□□ -2.35
NUP88Q99567 RNA5SP63-201ENST00000391225 112 ntBASIC0.36□□□□□ -2.35
NUP88Q99567 Y_RNA.596-201ENST00000410462 109 ntBASIC0.36□□□□□ -2.35
NUP88Q99567 AL513043.2-201ENST00000573941 143 ntBASIC0.36□□□□□ -2.35
NUP88Q99567 AC023932.2-201ENST00000603176 175 ntBASIC0.36□□□□□ -2.35
NUP88Q99567 Y_RNA.96-201ENST00000363092 109 ntBASIC0.35□□□□□ -2.35
NUP88Q99567 AL031737.1-201ENST00000450125 223 ntBASIC0.35□□□□□ -2.35
NUP88Q99567 MIR4777-201ENST00000583710 86 ntBASIC0.35□□□□□ -2.35
NUP88Q99567 MIR6755-201ENST00000619993 66 ntBASIC0.35□□□□□ -2.35
NUP88Q99567 U6.100-201ENST00000636230 99 ntBASIC0.35□□□□□ -2.35
NUP88Q99567 SNORA9.1-201ENST00000362412 131 ntBASIC0.34□□□□□ -2.36
NUP88Q99567 Y_RNA.283-201ENST00000364798 112 ntBASIC0.34□□□□□ -2.36
NUP88Q99567 AC006210.1-201ENST00000424882 111 ntBASIC0.34□□□□□ -2.36
NUP88Q99567 Y_RNA.648-201ENST00000459455 110 ntBASIC0.34□□□□□ -2.36
NUP88Q99567 RNU6-65P-201ENST00000516332 98 ntBASIC0.34□□□□□ -2.36
NUP88Q99567 Y_RNA.705-201ENST00000516862 110 ntBASIC0.34□□□□□ -2.36
NUP88Q99567 Y_RNA.107-201ENST00000363190 121 ntBASIC0.33□□□□□ -2.36
NUP88Q99567 RNU6-815P-201ENST00000384080 113 ntBASIC0.33□□□□□ -2.36
NUP88Q99567 RNY4P18-201ENST00000391107 89 ntBASIC0.33□□□□□ -2.36
NUP88Q99567 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
NUP88Q99567 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.33□□□□□ -2.36
NUP88Q99567 RNU6-1057P-201ENST00000517162 102 ntBASIC0.33□□□□□ -2.36
NUP88Q99567 NAMPTP3-201ENST00000569273 224 ntBASIC0.33□□□□□ -2.36
NUP88Q99567 MIR4536-1-201ENST00000583537 88 ntBASIC0.32□□□□□ -2.36
NUP88Q99567 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.32□□□□□ -2.36
NUP88Q99567 SNORA70.25-201ENST00000612741 95 ntBASIC0.32□□□□□ -2.36
NUP88Q99567 RNU6-766P-201ENST00000362478 107 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 SNORD101-201ENST00000384027 73 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 SNORD20-201ENST00000384550 80 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 MIR617-201ENST00000385030 97 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 RNU6-644P-201ENST00000391155 98 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 RNU6-972P-201ENST00000391208 107 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 SNORD110-201ENST00000408189 75 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 RNA5SP484-201ENST00000458857 111 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 MIR2113-201ENST00000459007 91 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 RNU6-287P-201ENST00000516230 98 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 RNU6-109P-201ENST00000516364 107 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 RNU6-184P-201ENST00000516514 107 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 U7.6-201ENST00000610841 64 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.31□□□□□ -2.36
NUP88Q99567 MIR450A1-201ENST00000362262 91 ntBASIC0.3□□□□□ -2.36
NUP88Q99567 AC069113.3-201ENST00000521019 150 ntBASIC0.3□□□□□ -2.36
NUP88Q99567 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.3□□□□□ -2.36
NUP88Q99567 Y_RNA.818-201ENST00000618813 71 ntBASIC0.3□□□□□ -2.36
NUP88Q99567 RNA5SP128-201ENST00000365305 116 ntBASIC0.29□□□□□ -2.36
NUP88Q99567 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
NUP88Q99567 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
NUP88Q99567 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
NUP88Q99567 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
NUP88Q99567 RNA5SP285-201ENST00000516619 119 ntBASIC0.29□□□□□ -2.36
NUP88Q99567 RNU6-919P-201ENST00000516731 104 ntBASIC0.29□□□□□ -2.36
NUP88Q99567 MIR5706-201ENST00000579841 80 ntBASIC0.29□□□□□ -2.36
NUP88Q99567 RNU6-35P-201ENST00000384530 107 ntBASIC0.28□□□□□ -2.36
NUP88Q99567 Y_RNA.544-201ENST00000384650 113 ntBASIC0.28□□□□□ -2.36
NUP88Q99567 RNU6-887P-201ENST00000410660 100 ntBASIC0.28□□□□□ -2.36
NUP88Q99567 RNU7-61P-201ENST00000515897 61 ntBASIC0.28□□□□□ -2.36
NUP88Q99567 RNU6-1232P-201ENST00000516299 86 ntBASIC0.28□□□□□ -2.36
NUP88Q99567 MIR548AG2-201ENST00000581228 64 ntBASIC0.28□□□□□ -2.36
NUP88Q99567 MIR6718-201ENST00000616153 80 ntBASIC0.28□□□□□ -2.36
NUP88Q99567 RNU6-664P-201ENST00000362381 107 ntBASIC0.27□□□□□ -2.37
NUP88Q99567 Y_RNA.207-201ENST00000364142 106 ntBASIC0.27□□□□□ -2.37
NUP88Q99567 MIR519E-201ENST00000385075 84 ntBASIC0.27□□□□□ -2.37
NUP88Q99567 RNU6-519P-201ENST00000410590 108 ntBASIC0.27□□□□□ -2.37
NUP88Q99567 MIR499B-201ENST00000636498 73 ntBASIC0.27□□□□□ -2.37
NUP88Q99567 SNORA63.4-201ENST00000362763 126 ntBASIC0.26□□□□□ -2.37
NUP88Q99567 RNU6-215P-201ENST00000365169 102 ntBASIC0.26□□□□□ -2.37
NUP88Q99567 RNA5SP476-201ENST00000516613 103 ntBASIC0.26□□□□□ -2.37
NUP88Q99567 Y_RNA.93-201ENST00000363066 109 ntBASIC0.25□□□□□ -2.37
NUP88Q99567 Y_RNA.239-201ENST00000364444 113 ntBASIC0.25□□□□□ -2.37
NUP88Q99567 RNU1-141P-201ENST00000364623 158 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms