Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU7-55P-201ENST00000459426 62 ntBASIC-1.09□□□□□ -2.58
USP47Q96K76 MIR4696-201ENST00000581431 70 ntBASIC-1.09□□□□□ -2.58
USP47Q96K76 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.09□□□□□ -2.58
USP47Q96K76 AC008737.2-201ENST00000599446 118 ntBASIC-1.09□□□□□ -2.58
USP47Q96K76 MIR548O2-201ENST00000616090 70 ntBASIC-1.09□□□□□ -2.58
USP47Q96K76 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.1□□□□□ -2.59
USP47Q96K76 SNORD114-3-201ENST00000364969 75 ntBASIC-1.1□□□□□ -2.59
USP47Q96K76 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.1□□□□□ -2.59
USP47Q96K76 SNORA49-201ENST00000386157 136 ntBASIC-1.1□□□□□ -2.59
USP47Q96K76 AL500527.2-201ENST00000454105 95 ntBASIC-1.1□□□□□ -2.59
USP47Q96K76 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.1□□□□□ -2.59
USP47Q96K76 MIR3128-201ENST00000581957 66 ntBASIC-1.1□□□□□ -2.59
USP47Q96K76 MIR6851-201ENST00000617060 67 ntBASIC-1.1□□□□□ -2.59
USP47Q96K76 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.11□□□□□ -2.59
USP47Q96K76 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.11□□□□□ -2.59
USP47Q96K76 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.11□□□□□ -2.59
USP47Q96K76 MIR4324-201ENST00000584846 72 ntBASIC-1.11□□□□□ -2.59
USP47Q96K76 AC145423.2-201ENST00000610631 239 ntBASIC-1.11□□□□□ -2.59
USP47Q96K76 RNU6-797P-201ENST00000363101 109 ntBASIC-1.12□□□□□ -2.59
USP47Q96K76 SNORD114-25-201ENST00000363742 72 ntBASIC-1.12□□□□□ -2.59
USP47Q96K76 SNORD38.1-201ENST00000363863 68 ntBASIC-1.12□□□□□ -2.59
USP47Q96K76 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.12□□□□□ -2.59
USP47Q96K76 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
USP47Q96K76 RNU6-111P-201ENST00000517179 105 ntBASIC-1.12□□□□□ -2.59
USP47Q96K76 AC022559.1-201ENST00000520905 205 ntBASIC-1.12□□□□□ -2.59
USP47Q96K76 MIR378F-201ENST00000578143 78 ntBASIC-1.12□□□□□ -2.59
USP47Q96K76 MIR3121-201ENST00000579680 77 ntBASIC-1.12□□□□□ -2.59
USP47Q96K76 RNU6-466P-201ENST00000391224 103 ntBASIC-1.13□□□□□ -2.59
USP47Q96K76 RNU6-762P-201ENST00000517107 102 ntBASIC-1.13□□□□□ -2.59
USP47Q96K76 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.14□□□□□ -2.59
USP47Q96K76 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.14□□□□□ -2.59
USP47Q96K76 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.14□□□□□ -2.59
USP47Q96K76 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.14□□□□□ -2.59
USP47Q96K76 MIR606-201ENST00000384851 96 ntBASIC-1.14□□□□□ -2.59
USP47Q96K76 SNORD2-201ENST00000459163 69 ntBASIC-1.14□□□□□ -2.59
USP47Q96K76 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.14□□□□□ -2.59
USP47Q96K76 RNU6-881P-201ENST00000516813 102 ntBASIC-1.14□□□□□ -2.59
USP47Q96K76 SNORA40.17-201ENST00000517256 115 ntBASIC-1.14□□□□□ -2.59
USP47Q96K76 MIR4499-201ENST00000584834 69 ntBASIC-1.14□□□□□ -2.59
USP47Q96K76 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.15□□□□□ -2.59
USP47Q96K76 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.15□□□□□ -2.59
USP47Q96K76 RNA5SP470-201ENST00000516463 106 ntBASIC-1.15□□□□□ -2.59
USP47Q96K76 AP002392.1-201ENST00000537692 208 ntBASIC-1.15□□□□□ -2.59
USP47Q96K76 uc_338.19-201ENST00000616808 99 ntBASIC-1.15□□□□□ -2.59
USP47Q96K76 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.16□□□□□ -2.59
USP47Q96K76 RNU6-363P-201ENST00000362895 105 ntBASIC-1.16□□□□□ -2.59
USP47Q96K76 SNORA13-201ENST00000458790 133 ntBASIC-1.16□□□□□ -2.59
USP47Q96K76 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.16□□□□□ -2.59
USP47Q96K76 RNU6-235P-201ENST00000362644 107 ntBASIC-1.17□□□□□ -2.6
USP47Q96K76 SNORA20.1-201ENST00000364790 130 ntBASIC-1.17□□□□□ -2.6
USP47Q96K76 MIR518B-201ENST00000385127 83 ntBASIC-1.17□□□□□ -2.6
USP47Q96K76 RNU6-274P-201ENST00000459566 107 ntBASIC-1.17□□□□□ -2.6
USP47Q96K76 AC130289.1-201ENST00000577321 73 ntBASIC-1.17□□□□□ -2.6
USP47Q96K76 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.18□□□□□ -2.6
USP47Q96K76 MIR1263-201ENST00000408324 86 ntBASIC-1.18□□□□□ -2.6
USP47Q96K76 RNU6-935P-201ENST00000410371 100 ntBASIC-1.18□□□□□ -2.6
USP47Q96K76 RN7SKP19-201ENST00000516016 252 ntBASIC-1.18□□□□□ -2.6
USP47Q96K76 SNORD114-4-201ENST00000363962 75 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 RNU6-973P-201ENST00000364690 107 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 RNU6-54P-201ENST00000365563 107 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 MIR582-201ENST00000365731 98 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 AP001094.1-201ENST00000579805 193 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 AC062037.2-201ENST00000610137 73 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 MTND5P18-201ENST00000445624 1801 ntBASIC-1.19□□□□□ -2.6
USP47Q96K76 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 RNU4-36P-201ENST00000364294 144 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 RNU6-409P-201ENST00000384114 104 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 MIR548D2-201ENST00000384955 97 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 MIR3179-1-201ENST00000578940 84 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 MIR3179-2-201ENST00000579107 84 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 MIR3179-3-201ENST00000579566 84 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 MIR5704-201ENST00000584029 77 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 MIR3179-4-201ENST00000617599 84 ntBASIC-1.2□□□□□ -2.6
USP47Q96K76 RNU6-721P-201ENST00000410155 105 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 RNA5SP136-201ENST00000410906 107 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 AL353813.1-201ENST00000440700 253 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.21□□□□□ -2.6
USP47Q96K76 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 RNU6-476P-201ENST00000384726 107 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 MIR451A-201ENST00000385059 72 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 RNU6-460P-201ENST00000391158 108 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 MIR548E-201ENST00000408287 88 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 AC097510.1-201ENST00000510945 133 ntBASIC-1.21□□□□□ -2.6
USP47Q96K76 RNU6-502P-201ENST00000362419 108 ntBASIC-1.22□□□□□ -2.61
USP47Q96K76 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.22□□□□□ -2.61
USP47Q96K76 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.22□□□□□ -2.61
USP47Q96K76 RNU6-915P-201ENST00000364943 103 ntBASIC-1.22□□□□□ -2.61
USP47Q96K76 RNU4-11P-201ENST00000365287 132 ntBASIC-1.22□□□□□ -2.61
USP47Q96K76 RNU6-24P-201ENST00000384440 107 ntBASIC-1.22□□□□□ -2.61
USP47Q96K76 MIR1302-3-201ENST00000408128 138 ntBASIC-1.22□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 216.5 ms