Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AL157398.1-201ENST00000452981 186 ntBASIC1.98□□□□□ -2.09
HPS1Q92902 AL512310.8-201ENST00000550183 120 ntBASIC1.98□□□□□ -2.09
HPS1Q92902 MIR3937-201ENST00000580135 106 ntBASIC1.98□□□□□ -2.09
HPS1Q92902 MIR5007-201ENST00000583098 95 ntBASIC1.98□□□□□ -2.09
HPS1Q92902 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HPS1Q92902 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
HPS1Q92902 RNU6-753P-201ENST00000363926 107 ntBASIC1.97□□□□□ -2.09
HPS1Q92902 MT-TY-201ENST00000387409 66 ntBASIC1.97□□□□□ -2.09
HPS1Q92902 SNORD113-2-201ENST00000391082 72 ntBASIC1.97□□□□□ -2.09
HPS1Q92902 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HPS1Q92902 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
HPS1Q92902 MIR7843-201ENST00000622274 79 ntBASIC1.97□□□□□ -2.09
HPS1Q92902 RNU6-698P-201ENST00000363523 107 ntBASIC1.96□□□□□ -2.1
HPS1Q92902 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
HPS1Q92902 RNU6-34P-201ENST00000364874 107 ntBASIC1.96□□□□□ -2.1
HPS1Q92902 Y_RNA.363-201ENST00000365529 113 ntBASIC1.96□□□□□ -2.1
HPS1Q92902 AL591704.2-201ENST00000421658 181 ntBASIC1.96□□□□□ -2.1
HPS1Q92902 RNU6-237P-201ENST00000515985 71 ntBASIC1.96□□□□□ -2.1
HPS1Q92902 AC046143.2-201ENST00000609789 160 ntBASIC1.96□□□□□ -2.1
HPS1Q92902 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HPS1Q92902 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
HPS1Q92902 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
HPS1Q92902 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
HPS1Q92902 SNORD41.1-201ENST00000391000 69 ntBASIC1.95□□□□□ -2.1
HPS1Q92902 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.95□□□□□ -2.1
HPS1Q92902 RNU7-21P-201ENST00000459430 62 ntBASIC1.95□□□□□ -2.1
HPS1Q92902 MIR6873-201ENST00000622788 63 ntBASIC1.95□□□□□ -2.1
HPS1Q92902 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HPS1Q92902 RNA5SP432-201ENST00000362480 116 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 SNORD114-4-201ENST00000363962 75 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 MIR548C-201ENST00000384815 97 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 MIR517B-201ENST00000385102 67 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 RNU6-994P-201ENST00000410507 111 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 SNORA31.2-201ENST00000516019 134 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 RNU7-174P-201ENST00000516248 59 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 MIR548AD-201ENST00000584780 82 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 AC012493.3-201ENST00000604494 112 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 AL157834.3-201ENST00000615543 103 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 MIR6766-201ENST00000622641 72 ntBASIC1.94□□□□□ -2.1
HPS1Q92902 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HPS1Q92902 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HPS1Q92902 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HPS1Q92902 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HPS1Q92902 MIR30A-201ENST00000385092 71 ntBASIC1.93□□□□□ -2.1
HPS1Q92902 MIR100-201ENST00000385259 80 ntBASIC1.93□□□□□ -2.1
HPS1Q92902 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HPS1Q92902 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.93□□□□□ -2.1
HPS1Q92902 RNA5SP233-201ENST00000459153 113 ntBASIC1.93□□□□□ -2.1
HPS1Q92902 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HPS1Q92902 MIR1-1-201ENST00000362147 71 ntBASIC1.92□□□□□ -2.1
HPS1Q92902 RNU6-135P-201ENST00000516769 101 ntBASIC1.92□□□□□ -2.1
HPS1Q92902 SNORA44.1-201ENST00000517031 108 ntBASIC1.92□□□□□ -2.1
HPS1Q92902 MIR4460-201ENST00000577862 86 ntBASIC1.92□□□□□ -2.1
HPS1Q92902 MIR5002-201ENST00000584713 97 ntBASIC1.92□□□□□ -2.1
HPS1Q92902 U2.7-201ENST00000619197 100 ntBASIC1.92□□□□□ -2.1
HPS1Q92902 SNORA80D-201ENST00000384488 135 ntBASIC1.91□□□□□ -2.1
HPS1Q92902 MIR520F-201ENST00000384824 87 ntBASIC1.91□□□□□ -2.1
HPS1Q92902 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.91□□□□□ -2.1
HPS1Q92902 MIR4299-201ENST00000577899 72 ntBASIC1.91□□□□□ -2.1
HPS1Q92902 MIR4524B-201ENST00000581569 115 ntBASIC1.91□□□□□ -2.1
HPS1Q92902 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
HPS1Q92902 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 snoU13.23-201ENST00000458863 104 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 RNU7-90P-201ENST00000459216 62 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 RNU7-119P-201ENST00000459279 63 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 AC108210.2-201ENST00000503681 201 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 RNA5SP200-201ENST00000516360 103 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 RN7SKP88-201ENST00000516847 250 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 RNU6-980P-201ENST00000516925 103 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 7SK.8-201ENST00000612110 250 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 AL136317.1-201ENST00000612653 226 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 7SK.11-201ENST00000615477 250 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 U4.4-201ENST00000620626 117 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 7SK.13-201ENST00000622040 250 ntBASIC1.9□□□□□ -2.11
HPS1Q92902 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
HPS1Q92902 MIR934-201ENST00000401241 83 ntBASIC1.89□□□□□ -2.11
HPS1Q92902 MIR4639-201ENST00000584938 69 ntBASIC1.89□□□□□ -2.11
HPS1Q92902 MIR219B-201ENST00000637023 88 ntBASIC1.89□□□□□ -2.11
HPS1Q92902 SNORA15B-2-201ENST00000384058 135 ntBASIC1.88□□□□□ -2.11
HPS1Q92902 SNORA15B-1-201ENST00000384334 135 ntBASIC1.88□□□□□ -2.11
HPS1Q92902 MIR221-201ENST00000385135 110 ntBASIC1.88□□□□□ -2.11
HPS1Q92902 AC021146.9-201ENST00000512503 156 ntBASIC1.88□□□□□ -2.11
HPS1Q92902 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.88□□□□□ -2.11
HPS1Q92902 MIR1827-201ENST00000408549 66 ntBASIC1.87□□□□□ -2.11
HPS1Q92902 SNORA7.1-201ENST00000363750 139 ntBASIC1.86□□□□□ -2.11
HPS1Q92902 RNU1-141P-201ENST00000364623 158 ntBASIC1.86□□□□□ -2.11
HPS1Q92902 SNORD28-201ENST00000384706 75 ntBASIC1.86□□□□□ -2.11
HPS1Q92902 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
HPS1Q92902 Y_RNA.633-201ENST00000459107 95 ntBASIC1.86□□□□□ -2.11
HPS1Q92902 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.86□□□□□ -2.11
HPS1Q92902 RMST_2.1-201ENST00000617263 136 ntBASIC1.86□□□□□ -2.11
HPS1Q92902 AC244669.1-204ENST00000621564 178 ntBASIC1.86□□□□□ -2.11
HPS1Q92902 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
HPS1Q92902 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HPS1Q92902 snoU13.13-201ENST00000458842 104 ntBASIC1.85□□□□□ -2.11
HPS1Q92902 AC002350.1-201ENST00000490759 375 ntBASIC1.85□□□□□ -2.11
HPS1Q92902 SNORD79.1-201ENST00000516069 84 ntBASIC1.85□□□□□ -2.11
HPS1Q92902 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 267.6 ms