Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RN7SKP88-201ENST00000516847 250 ntBASIC2.13□□□□□ -2.07
SCUBE3Q8IX30 7SK.8-201ENST00000612110 250 ntBASIC2.13□□□□□ -2.07
SCUBE3Q8IX30 7SK.11-201ENST00000615477 250 ntBASIC2.13□□□□□ -2.07
SCUBE3Q8IX30 MIR548O2-201ENST00000616090 70 ntBASIC2.13□□□□□ -2.07
SCUBE3Q8IX30 7SK.13-201ENST00000622040 250 ntBASIC2.13□□□□□ -2.07
SCUBE3Q8IX30 Y_RNA.32-201ENST00000362589 110 ntBASIC2.12□□□□□ -2.07
SCUBE3Q8IX30 RNU6-994P-201ENST00000410507 111 ntBASIC2.12□□□□□ -2.07
SCUBE3Q8IX30 RNU7-161P-201ENST00000517289 62 ntBASIC2.12□□□□□ -2.07
SCUBE3Q8IX30 SNORA25.5-201ENST00000363782 126 ntBASIC2.11□□□□□ -2.07
SCUBE3Q8IX30 RNU6-260P-201ENST00000384092 107 ntBASIC2.11□□□□□ -2.07
SCUBE3Q8IX30 MIR499A-201ENST00000384903 122 ntBASIC2.11□□□□□ -2.07
SCUBE3Q8IX30 MIR934-201ENST00000401241 83 ntBASIC2.11□□□□□ -2.07
SCUBE3Q8IX30 AC108667.1-201ENST00000428618 249 ntBASIC2.11□□□□□ -2.07
SCUBE3Q8IX30 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
SCUBE3Q8IX30 RNU1-40P-201ENST00000516816 164 ntBASIC2.11□□□□□ -2.07
SCUBE3Q8IX30 RNU1-97P-201ENST00000516872 164 ntBASIC2.11□□□□□ -2.07
SCUBE3Q8IX30 MIR6845-201ENST00000613182 61 ntBASIC2.11□□□□□ -2.07
SCUBE3Q8IX30 MIR1-1-201ENST00000362147 71 ntBASIC2.1□□□□□ -2.07
SCUBE3Q8IX30 RNU6-940P-201ENST00000363433 104 ntBASIC2.1□□□□□ -2.07
SCUBE3Q8IX30 Y_RNA.236-201ENST00000364427 111 ntBASIC2.1□□□□□ -2.07
SCUBE3Q8IX30 RNU6-645P-201ENST00000364649 106 ntBASIC2.1□□□□□ -2.07
SCUBE3Q8IX30 RNA5SP37-201ENST00000365420 130 ntBASIC2.1□□□□□ -2.07
SCUBE3Q8IX30 MIR100-201ENST00000385259 80 ntBASIC2.1□□□□□ -2.07
SCUBE3Q8IX30 MIR466-201ENST00000580653 84 ntBASIC2.1□□□□□ -2.07
SCUBE3Q8IX30 AL157834.3-201ENST00000615543 103 ntBASIC2.1□□□□□ -2.07
SCUBE3Q8IX30 RNU6-1335P-201ENST00000365426 107 ntBASIC2.09□□□□□ -2.07
SCUBE3Q8IX30 SNORA80D-201ENST00000384488 135 ntBASIC2.09□□□□□ -2.07
SCUBE3Q8IX30 MIR583-201ENST00000384846 75 ntBASIC2.09□□□□□ -2.07
SCUBE3Q8IX30 MIR519E-201ENST00000385075 84 ntBASIC2.09□□□□□ -2.07
SCUBE3Q8IX30 AL356379.1-201ENST00000414105 126 ntBASIC2.09□□□□□ -2.07
SCUBE3Q8IX30 RNU7-90P-201ENST00000459216 62 ntBASIC2.09□□□□□ -2.07
SCUBE3Q8IX30 MIR3657-201ENST00000584818 117 ntBASIC2.09□□□□□ -2.07
SCUBE3Q8IX30 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
SCUBE3Q8IX30 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SCUBE3Q8IX30 MIR7-2-201ENST00000384970 110 ntBASIC2.08□□□□□ -2.08
SCUBE3Q8IX30 RNU1-78P-201ENST00000391248 165 ntBASIC2.08□□□□□ -2.08
SCUBE3Q8IX30 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.08□□□□□ -2.08
SCUBE3Q8IX30 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
SCUBE3Q8IX30 MIR4448-201ENST00000584360 86 ntBASIC2.08□□□□□ -2.08
SCUBE3Q8IX30 AC067863.3-201ENST00000624172 122 ntBASIC2.08□□□□□ -2.08
SCUBE3Q8IX30 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCUBE3Q8IX30 RNU6-1079P-201ENST00000362861 110 ntBASIC2.07□□□□□ -2.08
SCUBE3Q8IX30 RNA5SP192-201ENST00000364404 120 ntBASIC2.07□□□□□ -2.08
SCUBE3Q8IX30 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
SCUBE3Q8IX30 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.07□□□□□ -2.08
SCUBE3Q8IX30 RNU6-321P-201ENST00000410912 106 ntBASIC2.07□□□□□ -2.08
SCUBE3Q8IX30 RNU7-104P-201ENST00000459398 79 ntBASIC2.07□□□□□ -2.08
SCUBE3Q8IX30 RNA5SP182-201ENST00000516064 82 ntBASIC2.07□□□□□ -2.08
SCUBE3Q8IX30 RNU6-54P-201ENST00000365563 107 ntBASIC2.06□□□□□ -2.08
SCUBE3Q8IX30 MIR520F-201ENST00000384824 87 ntBASIC2.06□□□□□ -2.08
SCUBE3Q8IX30 MIR8070-201ENST00000616510 88 ntBASIC2.06□□□□□ -2.08
SCUBE3Q8IX30 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SCUBE3Q8IX30 MIR378A-201ENST00000362177 66 ntBASIC2.05□□□□□ -2.08
SCUBE3Q8IX30 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SCUBE3Q8IX30 RNU6-910P-201ENST00000390844 107 ntBASIC2.05□□□□□ -2.08
SCUBE3Q8IX30 SCARNA21.1-201ENST00000515996 128 ntBASIC2.05□□□□□ -2.08
SCUBE3Q8IX30 AP000553.5-201ENST00000641933 54 ntBASIC2.05□□□□□ -2.08
SCUBE3Q8IX30 RNA5SP215-201ENST00000363440 122 ntBASIC2.04□□□□□ -2.08
SCUBE3Q8IX30 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
SCUBE3Q8IX30 MIR489-201ENST00000384923 84 ntBASIC2.03□□□□□ -2.08
SCUBE3Q8IX30 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SCUBE3Q8IX30 SNORD42B-201ENST00000458893 67 ntBASIC2.03□□□□□ -2.08
SCUBE3Q8IX30 RNU7-74P-201ENST00000459104 62 ntBASIC2.03□□□□□ -2.08
SCUBE3Q8IX30 MIR3198-2-201ENST00000577868 80 ntBASIC2.03□□□□□ -2.08
SCUBE3Q8IX30 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
SCUBE3Q8IX30 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCUBE3Q8IX30 RNU6V-201ENST00000384105 107 ntBASIC2.02□□□□□ -2.09
SCUBE3Q8IX30 RNA5SP299-201ENST00000391203 116 ntBASIC2.02□□□□□ -2.09
SCUBE3Q8IX30 RNU1-123P-201ENST00000458950 160 ntBASIC2.02□□□□□ -2.09
SCUBE3Q8IX30 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
SCUBE3Q8IX30 SNORD79.1-201ENST00000516069 84 ntBASIC2.02□□□□□ -2.09
SCUBE3Q8IX30 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.02□□□□□ -2.09
SCUBE3Q8IX30 MIR4422-201ENST00000581938 83 ntBASIC2.02□□□□□ -2.09
SCUBE3Q8IX30 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCUBE3Q8IX30 SNORA2.1-201ENST00000363089 137 ntBASIC2.01□□□□□ -2.09
SCUBE3Q8IX30 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.01□□□□□ -2.09
SCUBE3Q8IX30 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
SCUBE3Q8IX30 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SCUBE3Q8IX30 snoU13.18-201ENST00000459483 104 ntBASIC2□□□□□ -2.09
SCUBE3Q8IX30 AL136317.1-201ENST00000612653 226 ntBASIC2□□□□□ -2.09
SCUBE3Q8IX30 uc_338.20-201ENST00000621563 178 ntBASIC2□□□□□ -2.09
SCUBE3Q8IX30 SNORA17.3-201ENST00000391159 129 ntBASIC1.99□□□□□ -2.09
SCUBE3Q8IX30 TRMT112P2-201ENST00000512910 132 ntBASIC1.99□□□□□ -2.09
SCUBE3Q8IX30 RNU6-656P-201ENST00000516785 107 ntBASIC1.99□□□□□ -2.09
SCUBE3Q8IX30 RNA5SP117-201ENST00000365294 118 ntBASIC1.98□□□□□ -2.09
SCUBE3Q8IX30 MIR1827-201ENST00000408549 66 ntBASIC1.98□□□□□ -2.09
SCUBE3Q8IX30 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
SCUBE3Q8IX30 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
SCUBE3Q8IX30 MIR6739-201ENST00000622461 75 ntBASIC1.98□□□□□ -2.09
SCUBE3Q8IX30 RNU6-1089P-201ENST00000516473 104 ntBASIC1.97□□□□□ -2.09
SCUBE3Q8IX30 RNU6-902P-201ENST00000517212 91 ntBASIC1.97□□□□□ -2.09
SCUBE3Q8IX30 RMST_2.1-201ENST00000617263 136 ntBASIC1.97□□□□□ -2.09
SCUBE3Q8IX30 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SCUBE3Q8IX30 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SCUBE3Q8IX30 RNU6-446P-201ENST00000362827 106 ntBASIC1.96□□□□□ -2.1
SCUBE3Q8IX30 SNORD41.1-201ENST00000391000 69 ntBASIC1.96□□□□□ -2.1
SCUBE3Q8IX30 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
SCUBE3Q8IX30 AC002350.1-201ENST00000490759 375 ntBASIC1.96□□□□□ -2.1
SCUBE3Q8IX30 RNA5SP147-201ENST00000516493 109 ntBASIC1.96□□□□□ -2.1
SCUBE3Q8IX30 RNU6-135P-201ENST00000516769 101 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 287.3 ms