Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.47□□□□□ -2.48
PRPF39Q86UA1 RNA5SP476-201ENST00000516613 103 ntBASIC-0.47□□□□□ -2.48
PRPF39Q86UA1 MIR569-201ENST00000385228 96 ntBASIC-0.48□□□□□ -2.49
PRPF39Q86UA1 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.48□□□□□ -2.49
PRPF39Q86UA1 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.48□□□□□ -2.49
PRPF39Q86UA1 SNORD14C-201ENST00000365382 88 ntBASIC-0.49□□□□□ -2.49
PRPF39Q86UA1 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.49□□□□□ -2.49
PRPF39Q86UA1 RNU6-480P-201ENST00000384332 107 ntBASIC-0.49□□□□□ -2.49
PRPF39Q86UA1 MIR196A2-201ENST00000385189 110 ntBASIC-0.49□□□□□ -2.49
PRPF39Q86UA1 MIR652-201ENST00000385278 98 ntBASIC-0.49□□□□□ -2.49
PRPF39Q86UA1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.49□□□□□ -2.49
PRPF39Q86UA1 AC025166.1-201ENST00000612411 163 ntBASIC-0.49□□□□□ -2.49
PRPF39Q86UA1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.49□□□□□ -2.49
PRPF39Q86UA1 RNU6-235P-201ENST00000362644 107 ntBASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 SNORD114-29-201ENST00000364819 70 ntBASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 RNU6-455P-201ENST00000384681 107 ntBASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 SNORD126-201ENST00000459475 77 ntBASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 RNA5SP272-201ENST00000516095 111 ntBASIC-0.5□□□□□ -2.49
PRPF39Q86UA1 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.51□□□□□ -2.49
PRPF39Q86UA1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.51□□□□□ -2.49
PRPF39Q86UA1 snoU13.11-201ENST00000459219 104 ntBASIC-0.51□□□□□ -2.49
PRPF39Q86UA1 RNU6-816P-201ENST00000390914 107 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 RNU6-466P-201ENST00000391224 103 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 AC096531.1-201ENST00000419107 107 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 Z95118.1-201ENST00000421372 247 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 AC114755.3-201ENST00000481111 251 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 RNA5SP169-201ENST00000517268 117 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 AP000676.1-201ENST00000533307 52 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 AC007012.1-201ENST00000567192 175 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 MIR4696-201ENST00000581431 70 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 MIR4263-201ENST00000584745 83 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.52□□□□□ -2.49
PRPF39Q86UA1 MIR101-1-201ENST00000362265 75 ntBASIC-0.53□□□□□ -2.49
PRPF39Q86UA1 MIR9-2-201ENST00000384838 87 ntBASIC-0.53□□□□□ -2.49
PRPF39Q86UA1 SNORA49-201ENST00000386157 136 ntBASIC-0.53□□□□□ -2.49
PRPF39Q86UA1 SNORD58C-201ENST00000365223 64 ntBASIC-0.54□□□□□ -2.5
PRPF39Q86UA1 AL445193.1-201ENST00000441183 141 ntBASIC-0.54□□□□□ -2.5
PRPF39Q86UA1 AC097510.1-201ENST00000510945 133 ntBASIC-0.54□□□□□ -2.5
PRPF39Q86UA1 RNU6-758P-201ENST00000516292 89 ntBASIC-0.54□□□□□ -2.5
PRPF39Q86UA1 RNU6-762P-201ENST00000517107 102 ntBASIC-0.54□□□□□ -2.5
PRPF39Q86UA1 AC096720.1-201ENST00000604441 183 ntBASIC-0.54□□□□□ -2.5
PRPF39Q86UA1 AC145423.2-201ENST00000610631 239 ntBASIC-0.54□□□□□ -2.5
PRPF39Q86UA1 AL442128.1-201ENST00000615151 90 ntBASIC-0.54□□□□□ -2.5
PRPF39Q86UA1 FTX_2.1-201ENST00000618816 94 ntBASIC-0.54□□□□□ -2.5
PRPF39Q86UA1 MTND5P18-201ENST00000445624 1801 ntBASIC-0.54□□□□□ -2.5
PRPF39Q86UA1 RNU6-886P-201ENST00000384319 105 ntBASIC-0.55□□□□□ -2.5
PRPF39Q86UA1 MIR604-201ENST00000384880 94 ntBASIC-0.55□□□□□ -2.5
PRPF39Q86UA1 RNU6-426P-201ENST00000516464 97 ntBASIC-0.55□□□□□ -2.5
PRPF39Q86UA1 MTND5P41-201ENST00000517498 206 ntBASIC-0.55□□□□□ -2.5
PRPF39Q86UA1 MIR4432-201ENST00000581823 84 ntBASIC-0.55□□□□□ -2.5
PRPF39Q86UA1 RNU6-54P-201ENST00000365563 107 ntBASIC-0.56□□□□□ -2.5
PRPF39Q86UA1 MIR582-201ENST00000365731 98 ntBASIC-0.56□□□□□ -2.5
PRPF39Q86UA1 SNORD101-201ENST00000384027 73 ntBASIC-0.56□□□□□ -2.5
PRPF39Q86UA1 SNORD56B-201ENST00000384713 71 ntBASIC-0.56□□□□□ -2.5
PRPF39Q86UA1 RNU6-284P-201ENST00000411105 106 ntBASIC-0.56□□□□□ -2.5
PRPF39Q86UA1 HAR1A.1-201ENST00000459583 118 ntBASIC-0.56□□□□□ -2.5
PRPF39Q86UA1 MIR8064-201ENST00000612863 90 ntBASIC-0.56□□□□□ -2.5
PRPF39Q86UA1 MIR20A-201ENST00000362279 71 ntBASIC-0.57□□□□□ -2.5
PRPF39Q86UA1 RNU6-664P-201ENST00000362381 107 ntBASIC-0.57□□□□□ -2.5
PRPF39Q86UA1 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.57□□□□□ -2.5
PRPF39Q86UA1 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.57□□□□□ -2.5
PRPF39Q86UA1 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.57□□□□□ -2.5
PRPF39Q86UA1 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.57□□□□□ -2.5
PRPF39Q86UA1 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.57□□□□□ -2.5
PRPF39Q86UA1 AL078595.1-201ENST00000404458 226 ntBASIC-0.57□□□□□ -2.5
PRPF39Q86UA1 MIR548O2-201ENST00000616090 70 ntBASIC-0.57□□□□□ -2.5
PRPF39Q86UA1 SNORA32.3-201ENST00000384772 121 ntBASIC-0.58□□□□□ -2.5
PRPF39Q86UA1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.58□□□□□ -2.5
PRPF39Q86UA1 RNA5SP451-201ENST00000410588 110 ntBASIC-0.59□□□□□ -2.5
PRPF39Q86UA1 RNA5SP25-201ENST00000410815 110 ntBASIC-0.59□□□□□ -2.5
PRPF39Q86UA1 snoU13.13-201ENST00000458842 104 ntBASIC-0.59□□□□□ -2.5
PRPF39Q86UA1 RNU6-75P-201ENST00000515944 104 ntBASIC-0.59□□□□□ -2.5
PRPF39Q86UA1 MIR4436A-201ENST00000585278 85 ntBASIC-0.59□□□□□ -2.5
PRPF39Q86UA1 AC025521.1-201ENST00000621624 286 ntBASIC-0.59□□□□□ -2.5
PRPF39Q86UA1 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.6□□□□□ -2.51
PRPF39Q86UA1 MIR216B-201ENST00000390186 82 ntBASIC-0.6□□□□□ -2.51
PRPF39Q86UA1 snosnR66.1-201ENST00000391095 99 ntBASIC-0.6□□□□□ -2.51
PRPF39Q86UA1 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.6□□□□□ -2.51
PRPF39Q86UA1 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.6□□□□□ -2.51
PRPF39Q86UA1 AC244090.1-201ENST00000441884 93 ntBASIC-0.6□□□□□ -2.51
PRPF39Q86UA1 RNU6-719P-201ENST00000516671 104 ntBASIC-0.6□□□□□ -2.51
PRPF39Q86UA1 RNU6-86P-201ENST00000606534 107 ntBASIC-0.6□□□□□ -2.51
PRPF39Q86UA1 uc_338.36-201ENST00000622331 158 ntBASIC-0.6□□□□□ -2.51
PRPF39Q86UA1 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.61□□□□□ -2.51
PRPF39Q86UA1 MIR451A-201ENST00000385059 72 ntBASIC-0.61□□□□□ -2.51
PRPF39Q86UA1 SNORA40-201ENST00000388090 126 ntBASIC-0.61□□□□□ -2.51
PRPF39Q86UA1 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.61□□□□□ -2.51
PRPF39Q86UA1 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.61□□□□□ -2.51
PRPF39Q86UA1 SNORD42B-201ENST00000458893 67 ntBASIC-0.61□□□□□ -2.51
PRPF39Q86UA1 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms