Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MIR3613-201ENST00000579844 87 ntBASIC-0.06□□□□□ -2.42
NPHP3Q7Z494 MIR4290-201ENST00000583807 95 ntBASIC-0.06□□□□□ -2.42
NPHP3Q7Z494 SNORD115-44-201ENST00000365391 82 ntBASIC-0.07□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.07□□□□□ -2.42
NPHP3Q7Z494 MIR181B2-201ENST00000385004 89 ntBASIC-0.07□□□□□ -2.42
NPHP3Q7Z494 MIR548A3-201ENST00000385297 97 ntBASIC-0.07□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.07□□□□□ -2.42
NPHP3Q7Z494 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.07□□□□□ -2.42
NPHP3Q7Z494 MIR4694-201ENST00000578534 80 ntBASIC-0.07□□□□□ -2.42
NPHP3Q7Z494 AC096720.1-201ENST00000604441 183 ntBASIC-0.07□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.08□□□□□ -2.42
NPHP3Q7Z494 RNU6-161P-201ENST00000363051 106 ntBASIC-0.08□□□□□ -2.42
NPHP3Q7Z494 RNU6-704P-201ENST00000364162 103 ntBASIC-0.08□□□□□ -2.42
NPHP3Q7Z494 U8.6-201ENST00000364939 135 ntBASIC-0.08□□□□□ -2.42
NPHP3Q7Z494 SNORD50.2-201ENST00000365465 70 ntBASIC-0.08□□□□□ -2.42
NPHP3Q7Z494 RNU6-746P-201ENST00000384112 109 ntBASIC-0.08□□□□□ -2.42
NPHP3Q7Z494 RNA5SP163-201ENST00000410304 99 ntBASIC-0.08□□□□□ -2.42
NPHP3Q7Z494 AC093423.1-201ENST00000440817 142 ntBASIC-0.08□□□□□ -2.42
NPHP3Q7Z494 RNU6-86P-201ENST00000606534 107 ntBASIC-0.08□□□□□ -2.42
NPHP3Q7Z494 RNU6-832P-201ENST00000363319 107 ntBASIC-0.09□□□□□ -2.42
NPHP3Q7Z494 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.09□□□□□ -2.42
NPHP3Q7Z494 AC109327.2-201ENST00000448339 378 ntBASIC-0.09□□□□□ -2.42
NPHP3Q7Z494 snoU13.11-201ENST00000459219 104 ntBASIC-0.09□□□□□ -2.42
NPHP3Q7Z494 RNU6-758P-201ENST00000516292 89 ntBASIC-0.09□□□□□ -2.42
NPHP3Q7Z494 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.09□□□□□ -2.42
NPHP3Q7Z494 MIR4473-201ENST00000583731 91 ntBASIC-0.09□□□□□ -2.42
NPHP3Q7Z494 RNY3P2-201ENST00000362918 102 ntBASIC-0.1□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.1□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.1□□□□□ -2.42
NPHP3Q7Z494 RNU6-756P-201ENST00000383997 107 ntBASIC-0.1□□□□□ -2.42
NPHP3Q7Z494 RNU6-929P-201ENST00000384429 107 ntBASIC-0.1□□□□□ -2.42
NPHP3Q7Z494 MIR516B1-201ENST00000385211 90 ntBASIC-0.1□□□□□ -2.42
NPHP3Q7Z494 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.1□□□□□ -2.42
NPHP3Q7Z494 SNORA25.13-201ENST00000516395 103 ntBASIC-0.1□□□□□ -2.42
NPHP3Q7Z494 MIR5009-201ENST00000578736 100 ntBASIC-0.1□□□□□ -2.42
NPHP3Q7Z494 U6.95-201ENST00000636931 70 ntBASIC-0.1□□□□□ -2.42
NPHP3Q7Z494 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 SNORD116-14-201ENST00000383894 92 ntBASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 SNORD116-17-201ENST00000383929 92 ntBASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 RNU6-480P-201ENST00000384332 107 ntBASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 SNORD116-15-201ENST00000384445 92 ntBASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 SNORD116-19-201ENST00000384729 92 ntBASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 MIR892B-201ENST00000401279 77 ntBASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 YWHAEP2-201ENST00000580066 112 ntBASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 MIR4743-201ENST00000584576 69 ntBASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 AC084368.1-201ENST00000620935 65 ntBASIC-0.11□□□□□ -2.43
NPHP3Q7Z494 RNA5SP98-201ENST00000363158 137 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 SNORD114-31-201ENST00000363219 75 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 snoU13.19-201ENST00000459148 104 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 MIR4460-201ENST00000577862 86 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 AL670379.3-201ENST00000605040 251 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 AC069503.3-201ENST00000618674 145 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 AC025521.1-201ENST00000621624 286 ntBASIC-0.12□□□□□ -2.43
NPHP3Q7Z494 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 MIR106A-201ENST00000384870 81 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 RNU6-466P-201ENST00000391224 103 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 RNU7-159P-201ENST00000459284 62 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 AC141557.1-201ENST00000540982 400 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 RNU7-165P-201ENST00000458864 60 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 RNU6-180P-201ENST00000516697 61 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 MIR4696-201ENST00000581431 70 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 MIR4493-201ENST00000584016 73 ntBASIC-0.13□□□□□ -2.43
NPHP3Q7Z494 RNU6-302P-201ENST00000365249 107 ntBASIC-0.14□□□□□ -2.43
NPHP3Q7Z494 SNORD101-201ENST00000384027 73 ntBASIC-0.14□□□□□ -2.43
NPHP3Q7Z494 SNORA75.1-201ENST00000391130 148 ntBASIC-0.14□□□□□ -2.43
NPHP3Q7Z494 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.14□□□□□ -2.43
NPHP3Q7Z494 MIR6514-201ENST00000622549 70 ntBASIC-0.14□□□□□ -2.43
NPHP3Q7Z494 RNU6-664P-201ENST00000362381 107 ntBASIC-0.15□□□□□ -2.43
NPHP3Q7Z494 RNU6-959P-201ENST00000384671 107 ntBASIC-0.15□□□□□ -2.43
NPHP3Q7Z494 MIR876-201ENST00000401147 81 ntBASIC-0.15□□□□□ -2.43
NPHP3Q7Z494 MIR548AE1-201ENST00000583292 70 ntBASIC-0.15□□□□□ -2.43
NPHP3Q7Z494 AP001180.6-201ENST00000584918 159 ntBASIC-0.15□□□□□ -2.43
NPHP3Q7Z494 uc_338.10-201ENST00000621872 182 ntBASIC-0.15□□□□□ -2.43
NPHP3Q7Z494 SNORD114-15-201ENST00000364687 72 ntBASIC-0.16□□□□□ -2.44
NPHP3Q7Z494 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.16□□□□□ -2.44
NPHP3Q7Z494 RNY4P3-201ENST00000365254 95 ntBASIC-0.16□□□□□ -2.44
NPHP3Q7Z494 MT-TY-201ENST00000387409 66 ntBASIC-0.16□□□□□ -2.44
NPHP3Q7Z494 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.16□□□□□ -2.44
NPHP3Q7Z494 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.17□□□□□ -2.44
NPHP3Q7Z494 SNORD116-21-201ENST00000384507 92 ntBASIC-0.17□□□□□ -2.44
NPHP3Q7Z494 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.17□□□□□ -2.44
NPHP3Q7Z494 RNU7-188P-201ENST00000517063 64 ntBASIC-0.17□□□□□ -2.44
NPHP3Q7Z494 AL513043.2-201ENST00000573941 143 ntBASIC-0.17□□□□□ -2.44
NPHP3Q7Z494 MIR548Z-201ENST00000584743 97 ntBASIC-0.17□□□□□ -2.44
NPHP3Q7Z494 RN7SL660P-201ENST00000614852 299 ntBASIC-0.17□□□□□ -2.44
NPHP3Q7Z494 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.17□□□□□ -2.44
NPHP3Q7Z494 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.18□□□□□ -2.44
NPHP3Q7Z494 MIR548M-201ENST00000408260 86 ntBASIC-0.18□□□□□ -2.44
NPHP3Q7Z494 RNU6-75P-201ENST00000515944 104 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 350.4 ms