Protein–RNA interactions for Protein: Q6ZMP0

THSD4, Thrombospondin type-1 domain-containing protein 4, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4Q6ZMP0 RNU1-141P-201ENST00000364623 158 ntBASIC2.18□□□□□ -2.06
THSD4Q6ZMP0 RNU6-1065P-201ENST00000384513 106 ntBASIC2.18□□□□□ -2.06
THSD4Q6ZMP0 MIR520F-201ENST00000384824 87 ntBASIC2.18□□□□□ -2.06
THSD4Q6ZMP0 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
THSD4Q6ZMP0 SNORA40B-201ENST00000385573 128 ntBASIC2.18□□□□□ -2.06
THSD4Q6ZMP0 AC079140.2-201ENST00000506193 142 ntBASIC2.18□□□□□ -2.06
THSD4Q6ZMP0 RNU5B-6P-201ENST00000516765 68 ntBASIC2.18□□□□□ -2.06
THSD4Q6ZMP0 RNA5SP402-201ENST00000517148 110 ntBASIC2.18□□□□□ -2.06
THSD4Q6ZMP0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.18□□□□□ -2.06
THSD4Q6ZMP0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
THSD4Q6ZMP0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
THSD4Q6ZMP0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
THSD4Q6ZMP0 SNORA25.8-201ENST00000364831 128 ntBASIC2.17□□□□□ -2.06
THSD4Q6ZMP0 SNORD1A-201ENST00000364968 72 ntBASIC2.17□□□□□ -2.06
THSD4Q6ZMP0 MIR758-201ENST00000390227 88 ntBASIC2.17□□□□□ -2.06
THSD4Q6ZMP0 MIR548L-201ENST00000408303 86 ntBASIC2.17□□□□□ -2.06
THSD4Q6ZMP0 RNU6ATAC14P-201ENST00000516218 91 ntBASIC2.17□□□□□ -2.06
THSD4Q6ZMP0 MIR3937-201ENST00000580135 106 ntBASIC2.17□□□□□ -2.06
THSD4Q6ZMP0 AC080100.1-201ENST00000624239 5356 ntBASIC2.16□□□□□ -2.06
THSD4Q6ZMP0 RNU6-1250P-201ENST00000391218 107 ntBASIC2.16□□□□□ -2.06
THSD4Q6ZMP0 SNORD53-201ENST00000579969 78 ntBASIC2.16□□□□□ -2.06
THSD4Q6ZMP0 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
THSD4Q6ZMP0 MIR1-1-201ENST00000362147 71 ntBASIC2.15□□□□□ -2.07
THSD4Q6ZMP0 SNORA7.1-201ENST00000363750 139 ntBASIC2.15□□□□□ -2.07
THSD4Q6ZMP0 Y_RNA.224-201ENST00000364308 111 ntBASIC2.15□□□□□ -2.07
THSD4Q6ZMP0 SNORA63.6-201ENST00000364921 119 ntBASIC2.15□□□□□ -2.07
THSD4Q6ZMP0 SNORA70B-201ENST00000384210 135 ntBASIC2.15□□□□□ -2.07
THSD4Q6ZMP0 RNU6-724P-201ENST00000390958 105 ntBASIC2.15□□□□□ -2.07
THSD4Q6ZMP0 AL591704.2-201ENST00000421658 181 ntBASIC2.15□□□□□ -2.07
THSD4Q6ZMP0 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
THSD4Q6ZMP0 snoU13.9-201ENST00000458927 103 ntBASIC2.15□□□□□ -2.07
THSD4Q6ZMP0 RNU6-135P-201ENST00000516769 101 ntBASIC2.15□□□□□ -2.07
THSD4Q6ZMP0 SNORD33-201ENST00000362761 85 ntBASIC2.14□□□□□ -2.07
THSD4Q6ZMP0 Y_RNA.363-201ENST00000365529 113 ntBASIC2.14□□□□□ -2.07
THSD4Q6ZMP0 AL512310.8-201ENST00000550183 120 ntBASIC2.14□□□□□ -2.07
THSD4Q6ZMP0 MIR4713-201ENST00000582691 75 ntBASIC2.14□□□□□ -2.07
THSD4Q6ZMP0 MIR4639-201ENST00000584938 69 ntBASIC2.14□□□□□ -2.07
THSD4Q6ZMP0 AC244669.1-204ENST00000621564 178 ntBASIC2.14□□□□□ -2.07
THSD4Q6ZMP0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
THSD4Q6ZMP0 RNU6-247P-201ENST00000362636 107 ntBASIC2.13□□□□□ -2.07
THSD4Q6ZMP0 RNU6-810P-201ENST00000364001 107 ntBASIC2.13□□□□□ -2.07
THSD4Q6ZMP0 MIR644A-201ENST00000385262 94 ntBASIC2.13□□□□□ -2.07
THSD4Q6ZMP0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
THSD4Q6ZMP0 AC026436.1-201ENST00000510537 270 ntBASIC2.13□□□□□ -2.07
THSD4Q6ZMP0 RNA5SP24-201ENST00000516478 95 ntBASIC2.13□□□□□ -2.07
THSD4Q6ZMP0 MIR1291-201ENST00000627649 87 ntBASIC2.13□□□□□ -2.07
THSD4Q6ZMP0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
THSD4Q6ZMP0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
THSD4Q6ZMP0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
THSD4Q6ZMP0 RNA5SP289-201ENST00000362332 137 ntBASIC2.12□□□□□ -2.07
THSD4Q6ZMP0 MIR517C-201ENST00000385103 95 ntBASIC2.12□□□□□ -2.07
THSD4Q6ZMP0 RNU7-21P-201ENST00000459430 62 ntBASIC2.12□□□□□ -2.07
THSD4Q6ZMP0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
THSD4Q6ZMP0 RNA5SP432-201ENST00000362480 116 ntBASIC2.11□□□□□ -2.07
THSD4Q6ZMP0 Y_RNA.74-201ENST00000362911 99 ntBASIC2.11□□□□□ -2.07
THSD4Q6ZMP0 SNORD28-201ENST00000384706 75 ntBASIC2.11□□□□□ -2.07
THSD4Q6ZMP0 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
THSD4Q6ZMP0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.11□□□□□ -2.07
THSD4Q6ZMP0 MIR6840-201ENST00000611937 71 ntBASIC2.11□□□□□ -2.07
THSD4Q6ZMP0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
THSD4Q6ZMP0 MIR934-201ENST00000401241 83 ntBASIC2.1□□□□□ -2.07
THSD4Q6ZMP0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
THSD4Q6ZMP0 AL021921.1-201ENST00000442774 93 ntBASIC2.1□□□□□ -2.07
THSD4Q6ZMP0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.1□□□□□ -2.07
THSD4Q6ZMP0 MIR4287-201ENST00000579398 78 ntBASIC2.1□□□□□ -2.07
THSD4Q6ZMP0 AC046143.2-201ENST00000609789 160 ntBASIC2.1□□□□□ -2.07
THSD4Q6ZMP0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.1□□□□□ -2.07
THSD4Q6ZMP0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
THSD4Q6ZMP0 RNU6-726P-201ENST00000364680 107 ntBASIC2.09□□□□□ -2.07
THSD4Q6ZMP0 SCARNA17.3-201ENST00000516381 125 ntBASIC2.09□□□□□ -2.07
THSD4Q6ZMP0 7SK.11-201ENST00000615477 250 ntBASIC2.09□□□□□ -2.07
THSD4Q6ZMP0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
THSD4Q6ZMP0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
THSD4Q6ZMP0 MIR527-201ENST00000385244 85 ntBASIC2.08□□□□□ -2.08
THSD4Q6ZMP0 AC079804.2-201ENST00000490376 200 ntBASIC2.08□□□□□ -2.08
THSD4Q6ZMP0 AC002350.1-201ENST00000490759 375 ntBASIC2.08□□□□□ -2.08
THSD4Q6ZMP0 RNU6-469P-201ENST00000516253 101 ntBASIC2.08□□□□□ -2.08
THSD4Q6ZMP0 AC015712.3-201ENST00000559380 164 ntBASIC2.08□□□□□ -2.08
THSD4Q6ZMP0 CYP3A54P-201ENST00000566950 75 ntBASIC2.08□□□□□ -2.08
THSD4Q6ZMP0 RMST_2.1-201ENST00000617263 136 ntBASIC2.08□□□□□ -2.08
THSD4Q6ZMP0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 Y_RNA.282-201ENST00000364793 102 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 SNORA3.2-201ENST00000408221 125 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 RNU4-53P-201ENST00000410828 140 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 RNA5SP484-201ENST00000458857 111 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 RNU7-90P-201ENST00000459216 62 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 RNU6-518P-201ENST00000516056 96 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 RN7SKP88-201ENST00000516847 250 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 7SK.8-201ENST00000612110 250 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 7SK.13-201ENST00000622040 250 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 MIR7843-201ENST00000622274 79 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 MIR6766-201ENST00000622641 72 ntBASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.07□□□□□ -2.08
THSD4Q6ZMP0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
THSD4Q6ZMP0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
THSD4Q6ZMP0 RNU6-716P-201ENST00000365621 103 ntBASIC2.06□□□□□ -2.08
THSD4Q6ZMP0 SNORA8.2-201ENST00000384372 139 ntBASIC2.06□□□□□ -2.08
THSD4Q6ZMP0 SNORA80D-201ENST00000384488 135 ntBASIC2.06□□□□□ -2.08
THSD4Q6ZMP0 RNU6-269P-201ENST00000391077 97 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms