Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RNF20Q5VTR2 snoU13.23-201ENST00000458863 104 ntBASIC1.76□□□□□ -2.13
RNF20Q5VTR2 MIR548AG2-201ENST00000581228 64 ntBASIC1.76□□□□□ -2.13
RNF20Q5VTR2 MIR337-201ENST00000362281 93 ntBASIC1.75□□□□□ -2.13
RNF20Q5VTR2 SNORA25-201ENST00000384384 134 ntBASIC1.75□□□□□ -2.13
RNF20Q5VTR2 U3.27-201ENST00000391237 200 ntBASIC1.75□□□□□ -2.13
RNF20Q5VTR2 MIR3920-201ENST00000581751 86 ntBASIC1.75□□□□□ -2.13
RNF20Q5VTR2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
RNF20Q5VTR2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RNF20Q5VTR2 Y_RNA.258-201ENST00000364613 105 ntBASIC1.74□□□□□ -2.13
RNF20Q5VTR2 RNU6-382P-201ENST00000365181 106 ntBASIC1.74□□□□□ -2.13
RNF20Q5VTR2 RNA5SP117-201ENST00000365294 118 ntBASIC1.74□□□□□ -2.13
RNF20Q5VTR2 AL354695.1-201ENST00000427935 228 ntBASIC1.74□□□□□ -2.13
RNF20Q5VTR2 AL078603.1-201ENST00000603824 313 ntBASIC1.74□□□□□ -2.13
RNF20Q5VTR2 RNU1-17P-201ENST00000363022 152 ntBASIC1.73□□□□□ -2.13
RNF20Q5VTR2 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
RNF20Q5VTR2 RNU6-1126P-201ENST00000384002 107 ntBASIC1.73□□□□□ -2.13
RNF20Q5VTR2 AC015712.3-201ENST00000559380 164 ntBASIC1.73□□□□□ -2.13
RNF20Q5VTR2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
RNF20Q5VTR2 SNORD45.1-201ENST00000363181 77 ntBASIC1.72□□□□□ -2.13
RNF20Q5VTR2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.72□□□□□ -2.13
RNF20Q5VTR2 AC002350.1-201ENST00000490759 375 ntBASIC1.72□□□□□ -2.13
RNF20Q5VTR2 AC108210.2-201ENST00000503681 201 ntBASIC1.72□□□□□ -2.13
RNF20Q5VTR2 Y_RNA.340-201ENST00000365330 92 ntBASIC1.71□□□□□ -2.14
RNF20Q5VTR2 RNU1-123P-201ENST00000458950 160 ntBASIC1.71□□□□□ -2.14
RNF20Q5VTR2 RNU6-274P-201ENST00000459566 107 ntBASIC1.71□□□□□ -2.14
RNF20Q5VTR2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.71□□□□□ -2.14
RNF20Q5VTR2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
RNF20Q5VTR2 SNORD45A-201ENST00000384512 84 ntBASIC1.7□□□□□ -2.14
RNF20Q5VTR2 RNU6-663P-201ENST00000391105 106 ntBASIC1.7□□□□□ -2.14
RNF20Q5VTR2 SNORA17.3-201ENST00000391159 129 ntBASIC1.7□□□□□ -2.14
RNF20Q5VTR2 AC125388.1-201ENST00000459631 156 ntBASIC1.7□□□□□ -2.14
RNF20Q5VTR2 MIR7974-201ENST00000615835 79 ntBASIC1.7□□□□□ -2.14
RNF20Q5VTR2 AC067863.3-201ENST00000624172 122 ntBASIC1.7□□□□□ -2.14
RNF20Q5VTR2 RNA5SP99-201ENST00000364020 114 ntBASIC1.69□□□□□ -2.14
RNF20Q5VTR2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RNF20Q5VTR2 RNU6-955P-201ENST00000410497 104 ntBASIC1.68□□□□□ -2.14
RNF20Q5VTR2 MIR4524B-201ENST00000581569 115 ntBASIC1.68□□□□□ -2.14
RNF20Q5VTR2 RNU6-895P-201ENST00000384125 103 ntBASIC1.67□□□□□ -2.14
RNF20Q5VTR2 MIR617-201ENST00000385030 97 ntBASIC1.67□□□□□ -2.14
RNF20Q5VTR2 SNORD105-201ENST00000386910 85 ntBASIC1.67□□□□□ -2.14
RNF20Q5VTR2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.67□□□□□ -2.14
RNF20Q5VTR2 U6.111-201ENST00000636093 83 ntBASIC1.67□□□□□ -2.14
RNF20Q5VTR2 MIR519E-201ENST00000385075 84 ntBASIC1.66□□□□□ -2.14
RNF20Q5VTR2 AC244098.3-201ENST00000424803 96 ntBASIC1.66□□□□□ -2.14
RNF20Q5VTR2 AL691482.2-201ENST00000457453 84 ntBASIC1.66□□□□□ -2.14
RNF20Q5VTR2 RNU6-469P-201ENST00000516253 101 ntBASIC1.66□□□□□ -2.14
RNF20Q5VTR2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.66□□□□□ -2.14
RNF20Q5VTR2 MIR4303-201ENST00000581299 66 ntBASIC1.66□□□□□ -2.14
RNF20Q5VTR2 AC244669.1-204ENST00000621564 178 ntBASIC1.66□□□□□ -2.14
RNF20Q5VTR2 RNU6-800P-201ENST00000384473 103 ntBASIC1.65□□□□□ -2.15
RNF20Q5VTR2 NAMPTP3-201ENST00000569273 224 ntBASIC1.65□□□□□ -2.15
RNF20Q5VTR2 SNORA7.1-201ENST00000363750 139 ntBASIC1.64□□□□□ -2.15
RNF20Q5VTR2 SNORD115-22-201ENST00000364456 82 ntBASIC1.64□□□□□ -2.15
RNF20Q5VTR2 Y_RNA.386-201ENST00000383913 105 ntBASIC1.64□□□□□ -2.15
RNF20Q5VTR2 RNU6-604P-201ENST00000390917 100 ntBASIC1.64□□□□□ -2.15
RNF20Q5VTR2 FABP5P4-201ENST00000437203 171 ntBASIC1.64□□□□□ -2.15
RNF20Q5VTR2 SNORD124-201ENST00000459577 104 ntBASIC1.64□□□□□ -2.15
RNF20Q5VTR2 RNA5SP61-201ENST00000516453 100 ntBASIC1.64□□□□□ -2.15
RNF20Q5VTR2 AL353997.5-201ENST00000618886 171 ntBASIC1.64□□□□□ -2.15
RNF20Q5VTR2 SNORD28-201ENST00000384706 75 ntBASIC1.63□□□□□ -2.15
RNF20Q5VTR2 MIR548L-201ENST00000408303 86 ntBASIC1.63□□□□□ -2.15
RNF20Q5VTR2 U7.7-201ENST00000459276 60 ntBASIC1.63□□□□□ -2.15
RNF20Q5VTR2 RNU6-881P-201ENST00000516813 102 ntBASIC1.63□□□□□ -2.15
RNF20Q5VTR2 MIR8053-201ENST00000613344 75 ntBASIC1.63□□□□□ -2.15
RNF20Q5VTR2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RNF20Q5VTR2 MIR4769-201ENST00000584126 77 ntBASIC1.62□□□□□ -2.15
RNF20Q5VTR2 MIR4639-201ENST00000584938 69 ntBASIC1.62□□□□□ -2.15
RNF20Q5VTR2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RNF20Q5VTR2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.61□□□□□ -2.15
RNF20Q5VTR2 RNU6-54P-201ENST00000365563 107 ntBASIC1.61□□□□□ -2.15
RNF20Q5VTR2 MIR216B-201ENST00000390186 82 ntBASIC1.61□□□□□ -2.15
RNF20Q5VTR2 MIR758-201ENST00000390227 88 ntBASIC1.61□□□□□ -2.15
RNF20Q5VTR2 SNORD75.2-201ENST00000408784 58 ntBASIC1.61□□□□□ -2.15
RNF20Q5VTR2 RNU6-752P-201ENST00000516376 102 ntBASIC1.61□□□□□ -2.15
RNF20Q5VTR2 MIR548O2-201ENST00000616090 70 ntBASIC1.61□□□□□ -2.15
RNF20Q5VTR2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
RNF20Q5VTR2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.61□□□□□ -2.15
RNF20Q5VTR2 RNU6-495P-201ENST00000362995 107 ntBASIC1.6□□□□□ -2.15
RNF20Q5VTR2 MIR203A-201ENST00000384836 110 ntBASIC1.6□□□□□ -2.15
RNF20Q5VTR2 MIR1265-201ENST00000408444 86 ntBASIC1.6□□□□□ -2.15
RNF20Q5VTR2 RNU6-135P-201ENST00000516769 101 ntBASIC1.6□□□□□ -2.15
RNF20Q5VTR2 RNU1-92P-201ENST00000517017 135 ntBASIC1.6□□□□□ -2.15
RNF20Q5VTR2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RNF20Q5VTR2 MIR3678-201ENST00000578455 94 ntBASIC1.59□□□□□ -2.15
RNF20Q5VTR2 MIR3124-201ENST00000582636 67 ntBASIC1.59□□□□□ -2.15
RNF20Q5VTR2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.59□□□□□ -2.15
RNF20Q5VTR2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RNF20Q5VTR2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
RNF20Q5VTR2 MIR26B-201ENST00000362251 77 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 SNORD113.1-201ENST00000363280 73 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 SNORD18A-201ENST00000363753 72 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 RNU6-716P-201ENST00000365621 103 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 RNU6V-201ENST00000384105 107 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 MIR19B1-201ENST00000384829 87 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 RNU6-482P-201ENST00000391068 107 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 RNU6-630P-201ENST00000391258 106 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 AC108667.1-201ENST00000428618 249 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
RNF20Q5VTR2 MIR3612-201ENST00000579753 87 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 199.6 ms