Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU6-394P-201ENST00000410735 107 ntBASIC-0.58□□□□□ -2.5
SRP54P61011 AL158147.1-201ENST00000443970 75 ntBASIC-0.58□□□□□ -2.5
SRP54P61011 AP001328.1-201ENST00000528550 176 ntBASIC-0.58□□□□□ -2.5
SRP54P61011 FTX_2.1-201ENST00000618816 94 ntBASIC-0.58□□□□□ -2.5
SRP54P61011 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 RNU6-480P-201ENST00000384332 107 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 MIR604-201ENST00000384880 94 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 SNORA49-201ENST00000386157 136 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 MIR513C-201ENST00000401352 84 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 snoU13.11-201ENST00000459219 104 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 AC114755.3-201ENST00000481111 251 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 AC145423.2-201ENST00000610631 239 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 MIR548O2-201ENST00000616090 70 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 MIR6086-201ENST00000638065 55 ntBASIC-0.59□□□□□ -2.5
SRP54P61011 RNU6-664P-201ENST00000362381 107 ntBASIC-0.6□□□□□ -2.51
SRP54P61011 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.6□□□□□ -2.51
SRP54P61011 SNORD116-18-201ENST00000383961 92 ntBASIC-0.6□□□□□ -2.51
SRP54P61011 SNORD101-201ENST00000384027 73 ntBASIC-0.6□□□□□ -2.51
SRP54P61011 RNU6-409P-201ENST00000384114 104 ntBASIC-0.6□□□□□ -2.51
SRP54P61011 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.6□□□□□ -2.51
SRP54P61011 AC244090.1-201ENST00000441884 93 ntBASIC-0.6□□□□□ -2.51
SRP54P61011 RNU6-758P-201ENST00000516292 89 ntBASIC-0.6□□□□□ -2.51
SRP54P61011 RNA5SP476-201ENST00000516613 103 ntBASIC-0.6□□□□□ -2.51
SRP54P61011 RNA5SP66-201ENST00000517178 101 ntBASIC-0.6□□□□□ -2.51
SRP54P61011 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.61□□□□□ -2.51
SRP54P61011 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.61□□□□□ -2.51
SRP54P61011 RNA5SP169-201ENST00000517268 117 ntBASIC-0.61□□□□□ -2.51
SRP54P61011 MIR4436A-201ENST00000585278 85 ntBASIC-0.61□□□□□ -2.51
SRP54P61011 AC004792.1-201ENST00000614523 137 ntBASIC-0.61□□□□□ -2.51
SRP54P61011 AL442128.1-201ENST00000615151 90 ntBASIC-0.61□□□□□ -2.51
SRP54P61011 AL391099.1-201ENST00000624635 187 ntBASIC-0.61□□□□□ -2.51
SRP54P61011 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.62□□□□□ -2.51
SRP54P61011 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.62□□□□□ -2.51
SRP54P61011 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.62□□□□□ -2.51
SRP54P61011 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.62□□□□□ -2.51
SRP54P61011 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.62□□□□□ -2.51
SRP54P61011 RNU6-466P-201ENST00000391224 103 ntBASIC-0.62□□□□□ -2.51
SRP54P61011 RNU6-388P-201ENST00000517012 105 ntBASIC-0.62□□□□□ -2.51
SRP54P61011 RNU6-389P-201ENST00000517048 105 ntBASIC-0.62□□□□□ -2.51
SRP54P61011 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.62□□□□□ -2.51
SRP54P61011 MIR548X2-201ENST00000579776 100 ntBASIC-0.62□□□□□ -2.51
SRP54P61011 RNU6-804P-201ENST00000384286 107 ntBASIC-0.63□□□□□ -2.51
SRP54P61011 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.63□□□□□ -2.51
SRP54P61011 MIR569-201ENST00000385228 96 ntBASIC-0.63□□□□□ -2.51
SRP54P61011 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.63□□□□□ -2.51
SRP54P61011 AP000676.1-201ENST00000533307 52 ntBASIC-0.63□□□□□ -2.51
SRP54P61011 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.64□□□□□ -2.51
SRP54P61011 RNU6-900P-201ENST00000384498 102 ntBASIC-0.64□□□□□ -2.51
SRP54P61011 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.64□□□□□ -2.51
SRP54P61011 SNORD56B-201ENST00000384713 71 ntBASIC-0.64□□□□□ -2.51
SRP54P61011 RNU6-75P-201ENST00000515944 104 ntBASIC-0.64□□□□□ -2.51
SRP54P61011 U7.2-201ENST00000607576 63 ntBASIC-0.64□□□□□ -2.51
SRP54P61011 RNY4P6-201ENST00000363667 96 ntBASIC-0.65□□□□□ -2.51
SRP54P61011 RNU6-54P-201ENST00000365563 107 ntBASIC-0.65□□□□□ -2.51
SRP54P61011 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.65□□□□□ -2.51
SRP54P61011 RNU6-816P-201ENST00000390914 107 ntBASIC-0.65□□□□□ -2.51
SRP54P61011 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.65□□□□□ -2.51
SRP54P61011 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.65□□□□□ -2.51
SRP54P61011 RNU6-935P-201ENST00000410371 100 ntBASIC-0.65□□□□□ -2.51
SRP54P61011 RPS29P8-201ENST00000445109 171 ntBASIC-0.65□□□□□ -2.51
SRP54P61011 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.65□□□□□ -2.51
SRP54P61011 MIR3144-201ENST00000579460 79 ntBASIC-0.65□□□□□ -2.51
SRP54P61011 SNORD58C-201ENST00000365223 64 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 MIR582-201ENST00000365731 98 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 MT-TG-201ENST00000387429 68 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 MIR216B-201ENST00000390186 82 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 RNA5SP25-201ENST00000410815 110 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 RNA5SP272-201ENST00000516095 111 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 MIR4280-201ENST00000582178 76 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 AC025166.1-201ENST00000612411 163 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 AC093726.3-201ENST00000637588 150 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 AC099654.10-201ENST00000640395 161 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 MTND5P18-201ENST00000445624 1801 ntBASIC-0.66□□□□□ -2.52
SRP54P61011 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.67□□□□□ -2.52
SRP54P61011 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.67□□□□□ -2.52
SRP54P61011 MIR577-201ENST00000385196 96 ntBASIC-0.67□□□□□ -2.52
SRP54P61011 RNU7-55P-201ENST00000459426 62 ntBASIC-0.67□□□□□ -2.52
SRP54P61011 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.67□□□□□ -2.52
SRP54P61011 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.67□□□□□ -2.52
SRP54P61011 AC108676.2-201ENST00000605225 163 ntBASIC-0.67□□□□□ -2.52
SRP54P61011 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.68□□□□□ -2.52
SRP54P61011 SNORD115-25-201ENST00000362619 82 ntBASIC-0.68□□□□□ -2.52
SRP54P61011 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.68□□□□□ -2.52
SRP54P61011 MIR224-201ENST00000384889 81 ntBASIC-0.68□□□□□ -2.52
SRP54P61011 MIR451A-201ENST00000385059 72 ntBASIC-0.68□□□□□ -2.52
SRP54P61011 MIR548E-201ENST00000408287 88 ntBASIC-0.68□□□□□ -2.52
SRP54P61011 SNORD75.1-201ENST00000408373 60 ntBASIC-0.68□□□□□ -2.52
SRP54P61011 AL445193.1-201ENST00000441183 141 ntBASIC-0.68□□□□□ -2.52
SRP54P61011 AC025521.1-201ENST00000621624 286 ntBASIC-0.68□□□□□ -2.52
SRP54P61011 RNA5SP368-201ENST00000364298 116 ntBASIC-0.69□□□□□ -2.52
SRP54P61011 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.69□□□□□ -2.52
SRP54P61011 snoU13.13-201ENST00000458842 104 ntBASIC-0.69□□□□□ -2.52
SRP54P61011 SNORD42B-201ENST00000458893 67 ntBASIC-0.69□□□□□ -2.52
SRP54P61011 AC097510.1-201ENST00000510945 133 ntBASIC-0.69□□□□□ -2.52
SRP54P61011 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms