Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
MCCD1P59942 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
MCCD1P59942 RNU6-1126P-201ENST00000384002 107 ntBASIC1.67□□□□□ -2.14
MCCD1P59942 U3.27-201ENST00000391237 200 ntBASIC1.67□□□□□ -2.14
MCCD1P59942 SNORD30.1-201ENST00000391309 70 ntBASIC1.67□□□□□ -2.14
MCCD1P59942 RNU1-123P-201ENST00000458950 160 ntBASIC1.67□□□□□ -2.14
MCCD1P59942 RNU6-634P-201ENST00000459134 106 ntBASIC1.67□□□□□ -2.14
MCCD1P59942 RNU6-1110P-201ENST00000516462 101 ntBASIC1.67□□□□□ -2.14
MCCD1P59942 MIR4298-201ENST00000584380 73 ntBASIC1.67□□□□□ -2.14
MCCD1P59942 MIR337-201ENST00000362281 93 ntBASIC1.66□□□□□ -2.14
MCCD1P59942 RNU6-382P-201ENST00000365181 106 ntBASIC1.66□□□□□ -2.14
MCCD1P59942 RNA5SP190-201ENST00000365222 118 ntBASIC1.66□□□□□ -2.14
MCCD1P59942 MIR517C-201ENST00000385103 95 ntBASIC1.66□□□□□ -2.14
MCCD1P59942 MIR320A-201ENST00000385302 82 ntBASIC1.66□□□□□ -2.14
MCCD1P59942 U6.81-201ENST00000612550 106 ntBASIC1.66□□□□□ -2.14
MCCD1P59942 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.66□□□□□ -2.14
MCCD1P59942 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.66□□□□□ -2.14
MCCD1P59942 RNU6-955P-201ENST00000410497 104 ntBASIC1.65□□□□□ -2.15
MCCD1P59942 RNU6-274P-201ENST00000459566 107 ntBASIC1.65□□□□□ -2.15
MCCD1P59942 AC244669.1-204ENST00000621564 178 ntBASIC1.65□□□□□ -2.15
MCCD1P59942 SNORD45.1-201ENST00000363181 77 ntBASIC1.64□□□□□ -2.15
MCCD1P59942 RNU6-649P-201ENST00000384463 107 ntBASIC1.64□□□□□ -2.15
MCCD1P59942 MIR618-201ENST00000385287 98 ntBASIC1.64□□□□□ -2.15
MCCD1P59942 snoU13.23-201ENST00000458863 104 ntBASIC1.64□□□□□ -2.15
MCCD1P59942 U7.7-201ENST00000459276 60 ntBASIC1.64□□□□□ -2.15
MCCD1P59942 SNORA7.1-201ENST00000363750 139 ntBASIC1.63□□□□□ -2.15
MCCD1P59942 Y_RNA.258-201ENST00000364613 105 ntBASIC1.63□□□□□ -2.15
MCCD1P59942 SNORD115-31-201ENST00000365318 82 ntBASIC1.63□□□□□ -2.15
MCCD1P59942 MIR764-201ENST00000390811 85 ntBASIC1.63□□□□□ -2.15
MCCD1P59942 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
MCCD1P59942 RNU6-1335P-201ENST00000365426 107 ntBASIC1.62□□□□□ -2.15
MCCD1P59942 MIR617-201ENST00000385030 97 ntBASIC1.62□□□□□ -2.15
MCCD1P59942 AL591806.2-201ENST00000433122 173 ntBASIC1.62□□□□□ -2.15
MCCD1P59942 SNORD13-201ENST00000459299 104 ntBASIC1.62□□□□□ -2.15
MCCD1P59942 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
MCCD1P59942 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
MCCD1P59942 RNU6-716P-201ENST00000365621 103 ntBASIC1.61□□□□□ -2.15
MCCD1P59942 RNU6-540P-201ENST00000384622 101 ntBASIC1.61□□□□□ -2.15
MCCD1P59942 MIR1323-201ENST00000408090 73 ntBASIC1.61□□□□□ -2.15
MCCD1P59942 AL691482.2-201ENST00000457453 84 ntBASIC1.61□□□□□ -2.15
MCCD1P59942 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.61□□□□□ -2.15
MCCD1P59942 SNORD28-201ENST00000384706 75 ntBASIC1.6□□□□□ -2.15
MCCD1P59942 MIR519E-201ENST00000385075 84 ntBASIC1.6□□□□□ -2.15
MCCD1P59942 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.6□□□□□ -2.15
MCCD1P59942 RNU6-539P-201ENST00000516665 103 ntBASIC1.6□□□□□ -2.15
MCCD1P59942 MIR3678-201ENST00000578455 94 ntBASIC1.6□□□□□ -2.15
MCCD1P59942 MIR3612-201ENST00000579753 87 ntBASIC1.6□□□□□ -2.15
MCCD1P59942 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
MCCD1P59942 RNU1-17P-201ENST00000363022 152 ntBASIC1.59□□□□□ -2.15
MCCD1P59942 RNU6-895P-201ENST00000384125 103 ntBASIC1.59□□□□□ -2.15
MCCD1P59942 SNORD45A-201ENST00000384512 84 ntBASIC1.59□□□□□ -2.15
MCCD1P59942 SNORA17.3-201ENST00000391159 129 ntBASIC1.59□□□□□ -2.15
MCCD1P59942 AC244098.3-201ENST00000424803 96 ntBASIC1.59□□□□□ -2.15
MCCD1P59942 NAMPTP3-201ENST00000569273 224 ntBASIC1.59□□□□□ -2.15
MCCD1P59942 MIR4639-201ENST00000584938 69 ntBASIC1.59□□□□□ -2.15
MCCD1P59942 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
MCCD1P59942 AC015712.3-201ENST00000559380 164 ntBASIC1.58□□□□□ -2.16
MCCD1P59942 MIR203A-201ENST00000384836 110 ntBASIC1.57□□□□□ -2.16
MCCD1P59942 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
MCCD1P59942 RNU6-135P-201ENST00000516769 101 ntBASIC1.57□□□□□ -2.16
MCCD1P59942 SNORD18A-201ENST00000363753 72 ntBASIC1.56□□□□□ -2.16
MCCD1P59942 RNU6-590P-201ENST00000365039 107 ntBASIC1.56□□□□□ -2.16
MCCD1P59942 RNU6-54P-201ENST00000365563 107 ntBASIC1.56□□□□□ -2.16
MCCD1P59942 MIR19B1-201ENST00000384829 87 ntBASIC1.56□□□□□ -2.16
MCCD1P59942 MIR200A-201ENST00000384875 90 ntBASIC1.56□□□□□ -2.16
MCCD1P59942 RNU6-663P-201ENST00000391105 106 ntBASIC1.56□□□□□ -2.16
MCCD1P59942 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
MCCD1P59942 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
MCCD1P59942 MIR4303-201ENST00000581299 66 ntBASIC1.56□□□□□ -2.16
MCCD1P59942 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
MCCD1P59942 MIR573-201ENST00000384964 99 ntBASIC1.55□□□□□ -2.16
MCCD1P59942 MIR216B-201ENST00000390186 82 ntBASIC1.55□□□□□ -2.16
MCCD1P59942 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
MCCD1P59942 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
MCCD1P59942 Y_RNA.340-201ENST00000365330 92 ntBASIC1.54□□□□□ -2.16
MCCD1P59942 RNU6V-201ENST00000384105 107 ntBASIC1.54□□□□□ -2.16
MCCD1P59942 RNU6-604P-201ENST00000390917 100 ntBASIC1.54□□□□□ -2.16
MCCD1P59942 RNU6-548P-201ENST00000517083 115 ntBASIC1.54□□□□□ -2.16
MCCD1P59942 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
MCCD1P59942 AC011195.1-201ENST00000578177 177 ntBASIC1.54□□□□□ -2.16
MCCD1P59942 AC025627.3-201ENST00000582078 182 ntBASIC1.54□□□□□ -2.16
MCCD1P59942 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
MCCD1P59942 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
MCCD1P59942 RNU7-74P-201ENST00000459104 62 ntBASIC1.53□□□□□ -2.16
MCCD1P59942 AC125388.1-201ENST00000459631 156 ntBASIC1.53□□□□□ -2.16
MCCD1P59942 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
MCCD1P59942 RNA5SP404-201ENST00000517118 132 ntBASIC1.53□□□□□ -2.16
MCCD1P59942 MIR548O2-201ENST00000616090 70 ntBASIC1.53□□□□□ -2.16
MCCD1P59942 SNORD114-24-201ENST00000365029 72 ntBASIC1.52□□□□□ -2.17
MCCD1P59942 SNORD99-201ENST00000408612 74 ntBASIC1.52□□□□□ -2.17
MCCD1P59942 SNORD75.2-201ENST00000408784 58 ntBASIC1.52□□□□□ -2.17
MCCD1P59942 RNU6-881P-201ENST00000516813 102 ntBASIC1.52□□□□□ -2.17
MCCD1P59942 MIR6509-201ENST00000614603 85 ntBASIC1.52□□□□□ -2.17
MCCD1P59942 MIR7843-201ENST00000622274 79 ntBASIC1.52□□□□□ -2.17
MCCD1P59942 RNU6-495P-201ENST00000362995 107 ntBASIC1.51□□□□□ -2.17
MCCD1P59942 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.51□□□□□ -2.17
MCCD1P59942 RNA5SP47-201ENST00000517230 109 ntBASIC1.51□□□□□ -2.17
MCCD1P59942 MIR4460-201ENST00000577862 86 ntBASIC1.51□□□□□ -2.17
MCCD1P59942 MIR8053-201ENST00000613344 75 ntBASIC1.51□□□□□ -2.17
MCCD1P59942 SNORD115-22-201ENST00000364456 82 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 274 ms