Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 RNU6-576P-201ENST00000390854 102 ntBASIC-1.9□□□□□ -2.71
HIST1H2BDP58876 RNU4-61P-201ENST00000411243 107 ntBASIC-1.9□□□□□ -2.71
HIST1H2BDP58876 RNU6-875P-201ENST00000516488 106 ntBASIC-1.9□□□□□ -2.71
HIST1H2BDP58876 RNA5SP480-201ENST00000516840 109 ntBASIC-1.9□□□□□ -2.71
HIST1H2BDP58876 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.9□□□□□ -2.71
HIST1H2BDP58876 SNORA63.2-201ENST00000362603 126 ntBASIC-1.91□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.91□□□□□ -2.72
HIST1H2BDP58876 SNORA26.4-201ENST00000391188 123 ntBASIC-1.91□□□□□ -2.72
HIST1H2BDP58876 MIR4795-201ENST00000584182 89 ntBASIC-1.91□□□□□ -2.72
HIST1H2BDP58876 AL442128.1-201ENST00000615151 90 ntBASIC-1.91□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.92□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.92□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.92□□□□□ -2.72
HIST1H2BDP58876 RNU6-474P-201ENST00000384243 107 ntBASIC-1.92□□□□□ -2.72
HIST1H2BDP58876 MIR527-201ENST00000385244 85 ntBASIC-1.92□□□□□ -2.72
HIST1H2BDP58876 MIR548H3-201ENST00000408771 118 ntBASIC-1.92□□□□□ -2.72
HIST1H2BDP58876 MIR3140-201ENST00000583685 90 ntBASIC-1.92□□□□□ -2.72
HIST1H2BDP58876 RNU6-409P-201ENST00000384114 104 ntBASIC-1.93□□□□□ -2.72
HIST1H2BDP58876 MIR587-201ENST00000384845 96 ntBASIC-1.93□□□□□ -2.72
HIST1H2BDP58876 RNU7-24P-201ENST00000458867 62 ntBASIC-1.93□□□□□ -2.72
HIST1H2BDP58876 MIR4680-201ENST00000580906 66 ntBASIC-1.93□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.94□□□□□ -2.72
HIST1H2BDP58876 SNORD114-15-201ENST00000364687 72 ntBASIC-1.94□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.94□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.94□□□□□ -2.72
HIST1H2BDP58876 MIR548D2-201ENST00000384955 97 ntBASIC-1.94□□□□□ -2.72
HIST1H2BDP58876 MIR8485-201ENST00000401372 91 ntBASIC-1.94□□□□□ -2.72
HIST1H2BDP58876 AC025521.1-201ENST00000621624 286 ntBASIC-1.94□□□□□ -2.72
HIST1H2BDP58876 SNORD50.2-201ENST00000365465 70 ntBASIC-1.95□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.95□□□□□ -2.72
HIST1H2BDP58876 SNORA24B-201ENST00000384176 131 ntBASIC-1.95□□□□□ -2.72
HIST1H2BDP58876 MIR548A1-201ENST00000385041 97 ntBASIC-1.95□□□□□ -2.72
HIST1H2BDP58876 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.95□□□□□ -2.72
HIST1H2BDP58876 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.95□□□□□ -2.72
HIST1H2BDP58876 SNORD75.2-201ENST00000408784 58 ntBASIC-1.95□□□□□ -2.72
HIST1H2BDP58876 MIR3115-201ENST00000577915 68 ntBASIC-1.95□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.96□□□□□ -2.72
HIST1H2BDP58876 RNU6-132P-201ENST00000383863 107 ntBASIC-1.96□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.96□□□□□ -2.72
HIST1H2BDP58876 RNU6-713P-201ENST00000384761 107 ntBASIC-1.96□□□□□ -2.72
HIST1H2BDP58876 MT-TW-201ENST00000387382 68 ntBASIC-1.96□□□□□ -2.72
HIST1H2BDP58876 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.96□□□□□ -2.72
HIST1H2BDP58876 RNU7-85P-201ENST00000458851 63 ntBASIC-1.96□□□□□ -2.72
HIST1H2BDP58876 SNORD127-201ENST00000458892 86 ntBASIC-1.96□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.96□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.97□□□□□ -2.72
HIST1H2BDP58876 MIR1255B2-201ENST00000408618 67 ntBASIC-1.97□□□□□ -2.72
HIST1H2BDP58876 RBMX2P4-201ENST00000441256 376 ntBASIC-1.97□□□□□ -2.72
HIST1H2BDP58876 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.97□□□□□ -2.72
HIST1H2BDP58876 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.98□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.98□□□□□ -2.73
HIST1H2BDP58876 MIR1265-201ENST00000408444 86 ntBASIC-1.98□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.98□□□□□ -2.73
HIST1H2BDP58876 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.98□□□□□ -2.73
HIST1H2BDP58876 MIR6779-201ENST00000617283 64 ntBASIC-1.98□□□□□ -2.73
HIST1H2BDP58876 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.99□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.99□□□□□ -2.73
HIST1H2BDP58876 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.99□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.99□□□□□ -2.73
HIST1H2BDP58876 MIR548P-201ENST00000408336 84 ntBASIC-1.99□□□□□ -2.73
HIST1H2BDP58876 MIR1302-6-201ENST00000408466 90 ntBASIC-1.99□□□□□ -2.73
HIST1H2BDP58876 RNU2-51P-201ENST00000410708 197 ntBASIC-1.99□□□□□ -2.73
HIST1H2BDP58876 HLA-S-202ENST00000425174 53 ntBASIC-1.99□□□□□ -2.73
HIST1H2BDP58876 AC026421.1-201ENST00000519101 163 ntBASIC-1.99□□□□□ -2.73
HIST1H2BDP58876 SNORD115-22-201ENST00000364456 82 ntBASIC-2□□□□□ -2.73
HIST1H2BDP58876 RNU6-312P-201ENST00000364629 107 ntBASIC-2□□□□□ -2.73
HIST1H2BDP58876 SNORA33.1-201ENST00000364957 130 ntBASIC-2□□□□□ -2.73
HIST1H2BDP58876 SNORD37.2-201ENST00000391075 66 ntBASIC-2□□□□□ -2.73
HIST1H2BDP58876 snoU13.17-201ENST00000458802 104 ntBASIC-2□□□□□ -2.73
HIST1H2BDP58876 RNU6-1137P-201ENST00000517073 99 ntBASIC-2□□□□□ -2.73
HIST1H2BDP58876 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2□□□□□ -2.73
HIST1H2BDP58876 U6.104-201ENST00000637979 90 ntBASIC-2□□□□□ -2.73
HIST1H2BDP58876 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.01□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.118-201ENST00000363300 101 ntBASIC-2.01□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.01□□□□□ -2.73
HIST1H2BDP58876 RNU6-260P-201ENST00000384092 107 ntBASIC-2.01□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.568-201ENST00000384742 113 ntBASIC-2.01□□□□□ -2.73
HIST1H2BDP58876 MIR548U-201ENST00000390728 81 ntBASIC-2.01□□□□□ -2.73
HIST1H2BDP58876 MIR889-201ENST00000401280 79 ntBASIC-2.01□□□□□ -2.73
HIST1H2BDP58876 MIR3121-201ENST00000579680 77 ntBASIC-2.01□□□□□ -2.73
HIST1H2BDP58876 MIR3064-201ENST00000581130 66 ntBASIC-2.01□□□□□ -2.73
HIST1H2BDP58876 MIR3658-201ENST00000636291 56 ntBASIC-2.01□□□□□ -2.73
HIST1H2BDP58876 RNA5SP26-201ENST00000362406 119 ntBASIC-2.02□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.150-201ENST00000363562 102 ntBASIC-2.02□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.02□□□□□ -2.73
HIST1H2BDP58876 RNA5SP136-201ENST00000410906 107 ntBASIC-2.02□□□□□ -2.73
HIST1H2BDP58876 CYP3A54P-201ENST00000566950 75 ntBASIC-2.02□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.03□□□□□ -2.73
HIST1H2BDP58876 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.03□□□□□ -2.73
HIST1H2BDP58876 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.03□□□□□ -2.73
HIST1H2BDP58876 RNU6-918P-201ENST00000391219 106 ntBASIC-2.03□□□□□ -2.73
HIST1H2BDP58876 AC022028.1-201ENST00000412054 408 ntBASIC-2.03□□□□□ -2.73
HIST1H2BDP58876 RNA5SP147-201ENST00000516493 109 ntBASIC-2.03□□□□□ -2.73
HIST1H2BDP58876 AL513043.2-201ENST00000573941 143 ntBASIC-2.03□□□□□ -2.73
HIST1H2BDP58876 MIR5591-201ENST00000578248 65 ntBASIC-2.03□□□□□ -2.73
HIST1H2BDP58876 MIR8062-201ENST00000621515 85 ntBASIC-2.03□□□□□ -2.73
HIST1H2BDP58876 MIR1263-201ENST00000408324 86 ntBASIC-2.04□□□□□ -2.74
HIST1H2BDP58876 RNU6-985P-201ENST00000410182 104 ntBASIC-2.04□□□□□ -2.74
HIST1H2BDP58876 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.04□□□□□ -2.74
HIST1H2BDP58876 AL353691.2-201ENST00000443795 59 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms