Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 RNU5F-1-201ENST00000362507 117 ntBASIC1.22□□□□□ -2.21
ITGA1P56199 Y_RNA.264-201ENST00000364665 102 ntBASIC1.22□□□□□ -2.21
ITGA1P56199 RNU6-1051P-201ENST00000365471 102 ntBASIC1.22□□□□□ -2.21
ITGA1P56199 MIR19B1-201ENST00000384829 87 ntBASIC1.22□□□□□ -2.21
ITGA1P56199 SNORD89-201ENST00000390981 114 ntBASIC1.22□□□□□ -2.21
ITGA1P56199 MIR889-201ENST00000401280 79 ntBASIC1.22□□□□□ -2.21
ITGA1P56199 RNU6-935P-201ENST00000410371 100 ntBASIC1.22□□□□□ -2.21
ITGA1P56199 FABP5P4-201ENST00000437203 171 ntBASIC1.22□□□□□ -2.21
ITGA1P56199 RNU6-1110P-201ENST00000516462 101 ntBASIC1.22□□□□□ -2.21
ITGA1P56199 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.22□□□□□ -2.21
ITGA1P56199 MIR96-201ENST00000362288 78 ntBASIC1.21□□□□□ -2.22
ITGA1P56199 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
ITGA1P56199 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
ITGA1P56199 SNORD115-24-201ENST00000363528 82 ntBASIC1.2□□□□□ -2.22
ITGA1P56199 RNU6-1229P-201ENST00000364295 107 ntBASIC1.2□□□□□ -2.22
ITGA1P56199 RNY4P3-201ENST00000365254 95 ntBASIC1.2□□□□□ -2.22
ITGA1P56199 U7.4-201ENST00000614961 63 ntBASIC1.2□□□□□ -2.22
ITGA1P56199 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
ITGA1P56199 Y_RNA.207-201ENST00000364142 106 ntBASIC1.19□□□□□ -2.22
ITGA1P56199 SNORD115-44-201ENST00000365391 82 ntBASIC1.19□□□□□ -2.22
ITGA1P56199 SNORD105-201ENST00000386910 85 ntBASIC1.19□□□□□ -2.22
ITGA1P56199 U7.7-201ENST00000459276 60 ntBASIC1.19□□□□□ -2.22
ITGA1P56199 AC002350.1-201ENST00000490759 375 ntBASIC1.19□□□□□ -2.22
ITGA1P56199 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.19□□□□□ -2.22
ITGA1P56199 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
ITGA1P56199 RNA5SP403-201ENST00000363598 108 ntBASIC1.18□□□□□ -2.22
ITGA1P56199 Y_RNA.540-201ENST00000384638 111 ntBASIC1.18□□□□□ -2.22
ITGA1P56199 MIR200A-201ENST00000384875 90 ntBASIC1.18□□□□□ -2.22
ITGA1P56199 MIR451A-201ENST00000385059 72 ntBASIC1.18□□□□□ -2.22
ITGA1P56199 MIR942-201ENST00000401111 86 ntBASIC1.18□□□□□ -2.22
ITGA1P56199 snoU13.17-201ENST00000458802 104 ntBASIC1.18□□□□□ -2.22
ITGA1P56199 RNU7-13P-201ENST00000516413 62 ntBASIC1.18□□□□□ -2.22
ITGA1P56199 MIR3140-201ENST00000583685 90 ntBASIC1.18□□□□□ -2.22
ITGA1P56199 RNU1-93P-201ENST00000364704 169 ntBASIC1.17□□□□□ -2.22
ITGA1P56199 RNA5SP117-201ENST00000365294 118 ntBASIC1.17□□□□□ -2.22
ITGA1P56199 SNORD124-201ENST00000459577 104 ntBASIC1.17□□□□□ -2.22
ITGA1P56199 RNU6-287P-201ENST00000516230 98 ntBASIC1.17□□□□□ -2.22
ITGA1P56199 RNA5SP480-201ENST00000516840 109 ntBASIC1.17□□□□□ -2.22
ITGA1P56199 RNU6-1057P-201ENST00000517162 102 ntBASIC1.17□□□□□ -2.22
ITGA1P56199 RNU7-161P-201ENST00000517289 62 ntBASIC1.17□□□□□ -2.22
ITGA1P56199 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.17□□□□□ -2.22
ITGA1P56199 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.17□□□□□ -2.22
ITGA1P56199 Y_RNA.532-201ENST00000384590 113 ntBASIC1.16□□□□□ -2.22
ITGA1P56199 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
ITGA1P56199 SCARNA18B-201ENST00000458806 135 ntBASIC1.16□□□□□ -2.22
ITGA1P56199 RNU6-807P-201ENST00000516805 107 ntBASIC1.16□□□□□ -2.22
ITGA1P56199 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.16□□□□□ -2.22
ITGA1P56199 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
ITGA1P56199 Y_RNA.12-201ENST00000362393 112 ntBASIC1.15□□□□□ -2.23
ITGA1P56199 MIR644A-201ENST00000385262 94 ntBASIC1.15□□□□□ -2.23
ITGA1P56199 RNU7-104P-201ENST00000459398 79 ntBASIC1.15□□□□□ -2.23
ITGA1P56199 RNU6-135P-201ENST00000516769 101 ntBASIC1.15□□□□□ -2.23
ITGA1P56199 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.15□□□□□ -2.23
ITGA1P56199 AC022709.1-201ENST00000615967 87 ntBASIC1.15□□□□□ -2.23
ITGA1P56199 Y_RNA.788-201ENST00000622394 112 ntBASIC1.15□□□□□ -2.23
ITGA1P56199 MIR1297-201ENST00000637311 77 ntBASIC1.15□□□□□ -2.23
ITGA1P56199 MIR520E-201ENST00000384867 87 ntBASIC1.14□□□□□ -2.23
ITGA1P56199 RNU6-469P-201ENST00000516253 101 ntBASIC1.14□□□□□ -2.23
ITGA1P56199 RNU6-303P-201ENST00000517091 106 ntBASIC1.14□□□□□ -2.23
ITGA1P56199 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
ITGA1P56199 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.14□□□□□ -2.23
ITGA1P56199 YWHAEP2-201ENST00000580066 112 ntBASIC1.14□□□□□ -2.23
ITGA1P56199 YWHAEP3-201ENST00000582767 121 ntBASIC1.14□□□□□ -2.23
ITGA1P56199 MIR4484-201ENST00000582855 83 ntBASIC1.14□□□□□ -2.23
ITGA1P56199 MIR6515-201ENST00000619843 57 ntBASIC1.14□□□□□ -2.23
ITGA1P56199 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
ITGA1P56199 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
ITGA1P56199 SNORD114-27-201ENST00000363766 70 ntBASIC1.13□□□□□ -2.23
ITGA1P56199 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
ITGA1P56199 RNU6-1052P-201ENST00000411398 104 ntBASIC1.13□□□□□ -2.23
ITGA1P56199 MIR2113-201ENST00000459007 91 ntBASIC1.13□□□□□ -2.23
ITGA1P56199 RPS29P1-201ENST00000465274 159 ntBASIC1.13□□□□□ -2.23
ITGA1P56199 RNU6-719P-201ENST00000516671 104 ntBASIC1.13□□□□□ -2.23
ITGA1P56199 MIR3920-201ENST00000581751 86 ntBASIC1.13□□□□□ -2.23
ITGA1P56199 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.13□□□□□ -2.23
ITGA1P56199 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
ITGA1P56199 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
ITGA1P56199 RNU6-1126P-201ENST00000384002 107 ntBASIC1.12□□□□□ -2.23
ITGA1P56199 SNORA24B-201ENST00000384176 131 ntBASIC1.12□□□□□ -2.23
ITGA1P56199 MIR573-201ENST00000384964 99 ntBASIC1.12□□□□□ -2.23
ITGA1P56199 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
ITGA1P56199 U3.27-201ENST00000391237 200 ntBASIC1.12□□□□□ -2.23
ITGA1P56199 MIR4639-201ENST00000584938 69 ntBASIC1.12□□□□□ -2.23
ITGA1P56199 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
ITGA1P56199 SNORD114-24-201ENST00000365029 72 ntBASIC1.11□□□□□ -2.23
ITGA1P56199 RNU6-1335P-201ENST00000365426 107 ntBASIC1.11□□□□□ -2.23
ITGA1P56199 Y_RNA.545-201ENST00000384652 105 ntBASIC1.11□□□□□ -2.23
ITGA1P56199 Y_RNA.565-201ENST00000384719 101 ntBASIC1.11□□□□□ -2.23
ITGA1P56199 AC074348.1-201ENST00000426503 132 ntBASIC1.11□□□□□ -2.23
ITGA1P56199 AC073261.1-201ENST00000429409 121 ntBASIC1.11□□□□□ -2.23
ITGA1P56199 RNU6-1223P-201ENST00000517124 104 ntBASIC1.11□□□□□ -2.23
ITGA1P56199 MIR548AG2-201ENST00000581228 64 ntBASIC1.11□□□□□ -2.23
ITGA1P56199 AC025627.3-201ENST00000582078 182 ntBASIC1.11□□□□□ -2.23
ITGA1P56199 AC067863.3-201ENST00000624172 122 ntBASIC1.11□□□□□ -2.23
ITGA1P56199 Y_RNA.371-201ENST00000365591 113 ntBASIC1.1□□□□□ -2.23
ITGA1P56199 SNORD28-201ENST00000384706 75 ntBASIC1.1□□□□□ -2.23
ITGA1P56199 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
ITGA1P56199 AC097510.1-201ENST00000510945 133 ntBASIC1.1□□□□□ -2.23
ITGA1P56199 MIR3134-201ENST00000579433 74 ntBASIC1.1□□□□□ -2.23
ITGA1P56199 MIR3612-201ENST00000579753 87 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms