Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MIR548AE1-201ENST00000583292 70 ntBASIC-0.22□□□□□ -2.44
VCPP55072 AC025166.1-201ENST00000612411 163 ntBASIC-0.22□□□□□ -2.44
VCPP55072 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.22□□□□□ -2.44
VCPP55072 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.22□□□□□ -2.45
VCPP55072 RNU6-235P-201ENST00000362644 107 ntBASIC-0.23□□□□□ -2.45
VCPP55072 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.23□□□□□ -2.45
VCPP55072 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.23□□□□□ -2.45
VCPP55072 RNU6-409P-201ENST00000384114 104 ntBASIC-0.23□□□□□ -2.45
VCPP55072 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.23□□□□□ -2.45
VCPP55072 AC244250.2-201ENST00000418731 148 ntBASIC-0.23□□□□□ -2.45
VCPP55072 AL353813.1-201ENST00000440700 253 ntBASIC-0.23□□□□□ -2.45
VCPP55072 AC093423.1-201ENST00000440817 142 ntBASIC-0.23□□□□□ -2.45
VCPP55072 RNU6-426P-201ENST00000516464 97 ntBASIC-0.23□□□□□ -2.45
VCPP55072 MIR6514-201ENST00000622549 70 ntBASIC-0.23□□□□□ -2.45
VCPP55072 SNORD36A-201ENST00000362874 73 ntBASIC-0.24□□□□□ -2.45
VCPP55072 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.24□□□□□ -2.45
VCPP55072 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.24□□□□□ -2.45
VCPP55072 SNORD58C-201ENST00000365223 64 ntBASIC-0.24□□□□□ -2.45
VCPP55072 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.24□□□□□ -2.45
VCPP55072 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.24□□□□□ -2.45
VCPP55072 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.24□□□□□ -2.45
VCPP55072 MIR516B1-201ENST00000385211 90 ntBASIC-0.24□□□□□ -2.45
VCPP55072 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.24□□□□□ -2.45
VCPP55072 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.24□□□□□ -2.45
VCPP55072 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.24□□□□□ -2.45
VCPP55072 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.24□□□□□ -2.45
VCPP55072 TRDV1-202ENST00000621643 102 ntBASIC-0.24□□□□□ -2.45
VCPP55072 RNU4-32P-201ENST00000363404 141 ntBASIC-0.25□□□□□ -2.45
VCPP55072 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.25□□□□□ -2.45
VCPP55072 MIR2113-201ENST00000459007 91 ntBASIC-0.25□□□□□ -2.45
VCPP55072 RNU6-175P-201ENST00000516896 107 ntBASIC-0.25□□□□□ -2.45
VCPP55072 CR383656.4-201ENST00000546909 122 ntBASIC-0.25□□□□□ -2.45
VCPP55072 AC069503.3-201ENST00000618674 145 ntBASIC-0.25□□□□□ -2.45
VCPP55072 MTND5P18-201ENST00000445624 1801 ntBASIC-0.25□□□□□ -2.45
VCPP55072 MTND4LP9-201ENST00000427694 174 ntBASIC-0.26□□□□□ -2.45
VCPP55072 AL161932.1-201ENST00000437408 146 ntBASIC-0.26□□□□□ -2.45
VCPP55072 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
VCPP55072 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.26□□□□□ -2.45
VCPP55072 RNU6-287P-201ENST00000516230 98 ntBASIC-0.26□□□□□ -2.45
VCPP55072 AL590491.3-201ENST00000610731 82 ntBASIC-0.26□□□□□ -2.45
VCPP55072 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.27□□□□□ -2.45
VCPP55072 RNU6-816P-201ENST00000390914 107 ntBASIC-0.27□□□□□ -2.45
VCPP55072 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.27□□□□□ -2.45
VCPP55072 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.27□□□□□ -2.45
VCPP55072 RNU7-200P-201ENST00000516105 62 ntBASIC-0.27□□□□□ -2.45
VCPP55072 YWHAEP2-201ENST00000580066 112 ntBASIC-0.27□□□□□ -2.45
VCPP55072 MIR4473-201ENST00000583731 91 ntBASIC-0.27□□□□□ -2.45
VCPP55072 AC090425.1-201ENST00000610007 140 ntBASIC-0.27□□□□□ -2.45
VCPP55072 U8.6-201ENST00000364939 135 ntBASIC-0.28□□□□□ -2.45
VCPP55072 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
VCPP55072 SNORA51.5-201ENST00000384126 131 ntBASIC-0.28□□□□□ -2.45
VCPP55072 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.28□□□□□ -2.45
VCPP55072 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.28□□□□□ -2.45
VCPP55072 MIR4460-201ENST00000577862 86 ntBASIC-0.28□□□□□ -2.45
VCPP55072 AL442128.1-201ENST00000615151 90 ntBASIC-0.28□□□□□ -2.45
VCPP55072 uc_338.10-201ENST00000621872 182 ntBASIC-0.28□□□□□ -2.45
VCPP55072 MIR148A-201ENST00000362215 68 ntBASIC-0.29□□□□□ -2.46
VCPP55072 SNORA18.1-201ENST00000363418 128 ntBASIC-0.29□□□□□ -2.46
VCPP55072 SNORD114-11-201ENST00000363738 75 ntBASIC-0.29□□□□□ -2.46
VCPP55072 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.29□□□□□ -2.46
VCPP55072 RNU6-811P-201ENST00000384069 107 ntBASIC-0.29□□□□□ -2.46
VCPP55072 SNORA40-201ENST00000388090 126 ntBASIC-0.29□□□□□ -2.46
VCPP55072 AC109327.2-201ENST00000448339 378 ntBASIC-0.29□□□□□ -2.46
VCPP55072 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.29□□□□□ -2.46
VCPP55072 RNU7-188P-201ENST00000517063 64 ntBASIC-0.29□□□□□ -2.46
VCPP55072 AC145423.2-201ENST00000610631 239 ntBASIC-0.29□□□□□ -2.46
VCPP55072 U6.100-201ENST00000636230 99 ntBASIC-0.29□□□□□ -2.46
VCPP55072 AL162726.3-218ENST00000636401 95 ntBASIC-0.29□□□□□ -2.46
VCPP55072 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.3□□□□□ -2.46
VCPP55072 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.3□□□□□ -2.46
VCPP55072 RNU6-794P-201ENST00000517261 64 ntBASIC-0.3□□□□□ -2.46
VCPP55072 RNU6-957P-201ENST00000363652 99 ntBASIC-0.31□□□□□ -2.46
VCPP55072 MIR539-201ENST00000365690 78 ntBASIC-0.31□□□□□ -2.46
VCPP55072 MIR181B2-201ENST00000385004 89 ntBASIC-0.31□□□□□ -2.46
VCPP55072 SNORA49-201ENST00000386157 136 ntBASIC-0.31□□□□□ -2.46
VCPP55072 RNA5SP300-201ENST00000391197 107 ntBASIC-0.31□□□□□ -2.46
VCPP55072 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.31□□□□□ -2.46
VCPP55072 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.31□□□□□ -2.46
VCPP55072 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.31□□□□□ -2.46
VCPP55072 MIR4320-201ENST00000636981 65 ntBASIC-0.31□□□□□ -2.46
VCPP55072 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.32□□□□□ -2.46
VCPP55072 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.32□□□□□ -2.46
VCPP55072 RNU6-257P-201ENST00000410238 98 ntBASIC-0.32□□□□□ -2.46
VCPP55072 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.32□□□□□ -2.46
VCPP55072 RNU6-772P-201ENST00000516042 105 ntBASIC-0.32□□□□□ -2.46
VCPP55072 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.33□□□□□ -2.46
VCPP55072 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.33□□□□□ -2.46
VCPP55072 MIR196A2-201ENST00000385189 110 ntBASIC-0.33□□□□□ -2.46
VCPP55072 MT-TQ-201ENST00000387372 72 ntBASIC-0.33□□□□□ -2.46
VCPP55072 MT-TY-201ENST00000387409 66 ntBASIC-0.33□□□□□ -2.46
VCPP55072 RNA5SP169-201ENST00000517268 117 ntBASIC-0.33□□□□□ -2.46
VCPP55072 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.33□□□□□ -2.46
VCPP55072 AL157777.2-201ENST00000258070 137 ntBASIC-0.34□□□□□ -2.46
VCPP55072 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.34□□□□□ -2.46
VCPP55072 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
VCPP55072 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.34□□□□□ -2.46
VCPP55072 RNU6-480P-201ENST00000384332 107 ntBASIC-0.34□□□□□ -2.46
VCPP55072 MIR587-201ENST00000384845 96 ntBASIC-0.34□□□□□ -2.46
VCPP55072 RNU6-466P-201ENST00000391224 103 ntBASIC-0.34□□□□□ -2.46
VCPP55072 AC097510.1-201ENST00000510945 133 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms