Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNU6-132P-201ENST00000383863 107 ntBASIC-1.78□□□□□ -2.69
CASQ1P31415 RNU6-10P-201ENST00000384036 107 ntBASIC-1.78□□□□□ -2.69
CASQ1P31415 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.78□□□□□ -2.69
CASQ1P31415 MIR29B1-201ENST00000385015 81 ntBASIC-1.78□□□□□ -2.69
CASQ1P31415 MIR3163-201ENST00000581592 73 ntBASIC-1.78□□□□□ -2.69
CASQ1P31415 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.79□□□□□ -2.7
CASQ1P31415 MT-TW-201ENST00000387382 68 ntBASIC-1.79□□□□□ -2.7
CASQ1P31415 RNU7-85P-201ENST00000458851 63 ntBASIC-1.79□□□□□ -2.7
CASQ1P31415 snoU13.19-201ENST00000459148 104 ntBASIC-1.79□□□□□ -2.7
CASQ1P31415 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.79□□□□□ -2.7
CASQ1P31415 MIR3115-201ENST00000577915 68 ntBASIC-1.79□□□□□ -2.7
CASQ1P31415 AC025521.1-201ENST00000621624 286 ntBASIC-1.79□□□□□ -2.7
CASQ1P31415 RNU6-363P-201ENST00000362895 105 ntBASIC-1.8□□□□□ -2.7
CASQ1P31415 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.8□□□□□ -2.7
CASQ1P31415 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.8□□□□□ -2.7
CASQ1P31415 RNU6-30P-201ENST00000384561 107 ntBASIC-1.8□□□□□ -2.7
CASQ1P31415 MIR587-201ENST00000384845 96 ntBASIC-1.8□□□□□ -2.7
CASQ1P31415 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.8□□□□□ -2.7
CASQ1P31415 MTND1P19-201ENST00000511780 315 ntBASIC-1.8□□□□□ -2.7
CASQ1P31415 RNU6-875P-201ENST00000516488 106 ntBASIC-1.8□□□□□ -2.7
CASQ1P31415 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.8□□□□□ -2.7
CASQ1P31415 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.81□□□□□ -2.7
CASQ1P31415 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.81□□□□□ -2.7
CASQ1P31415 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.81□□□□□ -2.7
CASQ1P31415 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.81□□□□□ -2.7
CASQ1P31415 SNORD127-201ENST00000458892 86 ntBASIC-1.81□□□□□ -2.7
CASQ1P31415 AC026421.1-201ENST00000519101 163 ntBASIC-1.81□□□□□ -2.7
CASQ1P31415 MIR4680-201ENST00000580906 66 ntBASIC-1.81□□□□□ -2.7
CASQ1P31415 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.82□□□□□ -2.7
CASQ1P31415 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.82□□□□□ -2.7
CASQ1P31415 SNORD115-22-201ENST00000364456 82 ntBASIC-1.82□□□□□ -2.7
CASQ1P31415 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.82□□□□□ -2.7
CASQ1P31415 RBMX2P4-201ENST00000441256 376 ntBASIC-1.82□□□□□ -2.7
CASQ1P31415 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.82□□□□□ -2.7
CASQ1P31415 RNU6-706P-201ENST00000517229 104 ntBASIC-1.82□□□□□ -2.7
CASQ1P31415 MIR4795-201ENST00000584182 89 ntBASIC-1.82□□□□□ -2.7
CASQ1P31415 SNORA63.2-201ENST00000362603 126 ntBASIC-1.83□□□□□ -2.7
CASQ1P31415 RNA5SP192-201ENST00000364404 120 ntBASIC-1.83□□□□□ -2.7
CASQ1P31415 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.83□□□□□ -2.7
CASQ1P31415 SNORA26.4-201ENST00000391188 123 ntBASIC-1.83□□□□□ -2.7
CASQ1P31415 MIR3658-201ENST00000636291 56 ntBASIC-1.83□□□□□ -2.7
CASQ1P31415 MIR6844-201ENST00000637122 62 ntBASIC-1.83□□□□□ -2.7
CASQ1P31415 RNA5SP26-201ENST00000362406 119 ntBASIC-1.84□□□□□ -2.7
CASQ1P31415 SNORD50.2-201ENST00000365465 70 ntBASIC-1.84□□□□□ -2.7
CASQ1P31415 MIR889-201ENST00000401280 79 ntBASIC-1.84□□□□□ -2.7
CASQ1P31415 MIR3165-201ENST00000579874 75 ntBASIC-1.84□□□□□ -2.7
CASQ1P31415 AL442128.1-201ENST00000615151 90 ntBASIC-1.84□□□□□ -2.7
CASQ1P31415 MTND4P29-201ENST00000503122 1372 ntBASIC-1.85□□□□□ -2.7
CASQ1P31415 RNU7-24P-201ENST00000458867 62 ntBASIC-1.85□□□□□ -2.71
CASQ1P31415 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.85□□□□□ -2.71
CASQ1P31415 SNORD115-33-201ENST00000363723 82 ntBASIC-1.86□□□□□ -2.71
CASQ1P31415 SNORA33.1-201ENST00000364957 130 ntBASIC-1.86□□□□□ -2.71
CASQ1P31415 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.86□□□□□ -2.71
CASQ1P31415 SNORD18B-201ENST00000365659 72 ntBASIC-1.86□□□□□ -2.71
CASQ1P31415 MIR548D2-201ENST00000384955 97 ntBASIC-1.86□□□□□ -2.71
CASQ1P31415 SNORD90-201ENST00000391145 111 ntBASIC-1.86□□□□□ -2.71
CASQ1P31415 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.86□□□□□ -2.71
CASQ1P31415 MIR548P-201ENST00000408336 84 ntBASIC-1.86□□□□□ -2.71
CASQ1P31415 SNORD75.2-201ENST00000408784 58 ntBASIC-1.86□□□□□ -2.71
CASQ1P31415 MIR4536-1-201ENST00000583537 88 ntBASIC-1.86□□□□□ -2.71
CASQ1P31415 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.87□□□□□ -2.71
CASQ1P31415 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.87□□□□□ -2.71
CASQ1P31415 MIR527-201ENST00000385244 85 ntBASIC-1.87□□□□□ -2.71
CASQ1P31415 MIR1255B2-201ENST00000408618 67 ntBASIC-1.87□□□□□ -2.71
CASQ1P31415 MIR548H3-201ENST00000408771 118 ntBASIC-1.87□□□□□ -2.71
CASQ1P31415 snoU13.17-201ENST00000458802 104 ntBASIC-1.87□□□□□ -2.71
CASQ1P31415 RNU6-65P-201ENST00000516332 98 ntBASIC-1.87□□□□□ -2.71
CASQ1P31415 AC138207.3-201ENST00000585289 166 ntBASIC-1.87□□□□□ -2.71
CASQ1P31415 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.88□□□□□ -2.71
CASQ1P31415 MIR548A1-201ENST00000385041 97 ntBASIC-1.88□□□□□ -2.71
CASQ1P31415 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.88□□□□□ -2.71
CASQ1P31415 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.88□□□□□ -2.71
CASQ1P31415 RNU6-988P-201ENST00000519081 107 ntBASIC-1.88□□□□□ -2.71
CASQ1P31415 MIR3646-201ENST00000578301 84 ntBASIC-1.88□□□□□ -2.71
CASQ1P31415 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.89□□□□□ -2.71
CASQ1P31415 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.89□□□□□ -2.71
CASQ1P31415 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.89□□□□□ -2.71
CASQ1P31415 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.89□□□□□ -2.71
CASQ1P31415 RNU6-918P-201ENST00000391219 106 ntBASIC-1.89□□□□□ -2.71
CASQ1P31415 AC107027.2-201ENST00000512197 115 ntBASIC-1.89□□□□□ -2.71
CASQ1P31415 RNA5SP67-201ENST00000516422 131 ntBASIC-1.89□□□□□ -2.71
CASQ1P31415 MIR3064-201ENST00000581130 66 ntBASIC-1.89□□□□□ -2.71
CASQ1P31415 RNU6-151P-201ENST00000364158 107 ntBASIC-1.9□□□□□ -2.71
CASQ1P31415 RNU6-409P-201ENST00000384114 104 ntBASIC-1.9□□□□□ -2.71
CASQ1P31415 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.9□□□□□ -2.71
CASQ1P31415 MIR3121-201ENST00000579680 77 ntBASIC-1.9□□□□□ -2.71
CASQ1P31415 U6atac.1-201ENST00000616025 117 ntBASIC-1.9□□□□□ -2.71
CASQ1P31415 AL160413.1-201ENST00000622780 310 ntBASIC-1.9□□□□□ -2.71
CASQ1P31415 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.91□□□□□ -2.72
CASQ1P31415 RNU6-576P-201ENST00000390854 102 ntBASIC-1.91□□□□□ -2.72
CASQ1P31415 AC091912.2-201ENST00000624798 167 ntBASIC-1.91□□□□□ -2.72
CASQ1P31415 RNU6-924P-201ENST00000362926 108 ntBASIC-1.92□□□□□ -2.72
CASQ1P31415 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.92□□□□□ -2.72
CASQ1P31415 MIR1302-6-201ENST00000408466 90 ntBASIC-1.92□□□□□ -2.72
CASQ1P31415 RNA5SP147-201ENST00000516493 109 ntBASIC-1.92□□□□□ -2.72
CASQ1P31415 AP002795.1-201ENST00000534879 84 ntBASIC-1.92□□□□□ -2.72
CASQ1P31415 AL513043.2-201ENST00000573941 143 ntBASIC-1.92□□□□□ -2.72
CASQ1P31415 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.93□□□□□ -2.72
CASQ1P31415 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.93□□□□□ -2.72
CASQ1P31415 RNU6-382P-201ENST00000365181 106 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 267.7 ms