Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.43□□□□□ -2.34
HOXC8P31273 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.43□□□□□ -2.34
HOXC8P31273 MIR8087-201ENST00000612745 78 ntBASIC0.43□□□□□ -2.34
HOXC8P31273 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
HOXC8P31273 SNORD118-201ENST00000363593 134 ntBASIC0.42□□□□□ -2.34
HOXC8P31273 RNU6-726P-201ENST00000364680 107 ntBASIC0.42□□□□□ -2.34
HOXC8P31273 MIR518A1-201ENST00000385068 85 ntBASIC0.42□□□□□ -2.34
HOXC8P31273 RNU6-466P-201ENST00000391224 103 ntBASIC0.42□□□□□ -2.34
HOXC8P31273 RNU6-1265P-201ENST00000516342 103 ntBASIC0.42□□□□□ -2.34
HOXC8P31273 RNU7-13P-201ENST00000516413 62 ntBASIC0.42□□□□□ -2.34
HOXC8P31273 RNU6-887P-201ENST00000410660 100 ntBASIC0.41□□□□□ -2.34
HOXC8P31273 AC069271.1-201ENST00000445577 156 ntBASIC0.41□□□□□ -2.34
HOXC8P31273 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
HOXC8P31273 RNU6-162P-201ENST00000516228 103 ntBASIC0.41□□□□□ -2.34
HOXC8P31273 U6.100-201ENST00000636230 99 ntBASIC0.41□□□□□ -2.34
HOXC8P31273 Y_RNA.81-201ENST00000362997 102 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 Y_RNA.283-201ENST00000364798 112 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 RNU6-32P-201ENST00000383948 107 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 RNU6-13P-201ENST00000384248 107 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 Y_RNA.495-201ENST00000384435 112 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 RNU6-12P-201ENST00000384604 107 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 RNU6-41P-201ENST00000384741 107 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 RNU6-972P-201ENST00000391208 107 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
HOXC8P31273 Y_RNA.648-201ENST00000459455 110 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 U7.3-201ENST00000616123 62 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 AP001318.4-201ENST00000616637 121 ntBASIC0.4□□□□□ -2.35
HOXC8P31273 Y_RNA.96-201ENST00000363092 109 ntBASIC0.39□□□□□ -2.35
HOXC8P31273 Y_RNA.115-201ENST00000363272 98 ntBASIC0.39□□□□□ -2.35
HOXC8P31273 RNU6-153P-201ENST00000364422 104 ntBASIC0.39□□□□□ -2.35
HOXC8P31273 SNORD58A-201ENST00000383875 65 ntBASIC0.39□□□□□ -2.35
HOXC8P31273 MTATP8P2-201ENST00000435212 202 ntBASIC0.39□□□□□ -2.35
HOXC8P31273 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.39□□□□□ -2.35
HOXC8P31273 MIR4752-201ENST00000579672 72 ntBASIC0.39□□□□□ -2.35
HOXC8P31273 MIR3920-201ENST00000581751 86 ntBASIC0.39□□□□□ -2.35
HOXC8P31273 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
HOXC8P31273 SNORD41.1-201ENST00000391000 69 ntBASIC0.38□□□□□ -2.35
HOXC8P31273 SNORA40.13-201ENST00000516379 120 ntBASIC0.38□□□□□ -2.35
HOXC8P31273 MIR2909-201ENST00000617113 69 ntBASIC0.38□□□□□ -2.35
HOXC8P31273 AL109933.3-201ENST00000619095 188 ntBASIC0.38□□□□□ -2.35
HOXC8P31273 RNU6-269P-201ENST00000391077 97 ntBASIC0.37□□□□□ -2.35
HOXC8P31273 Y_RNA.596-201ENST00000410462 109 ntBASIC0.37□□□□□ -2.35
HOXC8P31273 RNU7-85P-201ENST00000458851 63 ntBASIC0.37□□□□□ -2.35
HOXC8P31273 RNU6-158P-201ENST00000517104 100 ntBASIC0.37□□□□□ -2.35
HOXC8P31273 MIR103A1-201ENST00000362165 78 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 SNORD115-44-201ENST00000365391 82 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 Y_RNA.348-201ENST00000365403 103 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 RNU6-1126P-201ENST00000384002 107 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 RNU2-59P-201ENST00000410482 191 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 RNU6-75P-201ENST00000515944 104 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 RNU6-287P-201ENST00000516230 98 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 RNU6-65P-201ENST00000516332 98 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 MIR548AG2-201ENST00000581228 64 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 MIR4536-1-201ENST00000583537 88 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 AL162376.1-201ENST00000624117 175 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 MIR2052-201ENST00000636055 55 ntBASIC0.36□□□□□ -2.35
HOXC8P31273 SNORD116-10-201ENST00000363791 102 ntBASIC0.35□□□□□ -2.35
HOXC8P31273 Y_RNA.190-201ENST00000363964 101 ntBASIC0.35□□□□□ -2.35
HOXC8P31273 Y_RNA.290-201ENST00000364879 114 ntBASIC0.35□□□□□ -2.35
HOXC8P31273 SNORD101-201ENST00000384027 73 ntBASIC0.35□□□□□ -2.35
HOXC8P31273 Y_RNA.423-201ENST00000384057 113 ntBASIC0.35□□□□□ -2.35
HOXC8P31273 RNU6-519P-201ENST00000410590 108 ntBASIC0.35□□□□□ -2.35
HOXC8P31273 RNU6-168P-201ENST00000516189 101 ntBASIC0.35□□□□□ -2.35
HOXC8P31273 Y_RNA.677-201ENST00000516401 85 ntBASIC0.35□□□□□ -2.35
HOXC8P31273 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
HOXC8P31273 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
HOXC8P31273 Y_RNA.207-201ENST00000364142 106 ntBASIC0.34□□□□□ -2.36
HOXC8P31273 MIR1197-201ENST00000408818 88 ntBASIC0.34□□□□□ -2.36
HOXC8P31273 RNA5SP89-201ENST00000410300 108 ntBASIC0.34□□□□□ -2.36
HOXC8P31273 MIR2113-201ENST00000459007 91 ntBASIC0.34□□□□□ -2.36
HOXC8P31273 MIR4696-201ENST00000581431 70 ntBASIC0.34□□□□□ -2.36
HOXC8P31273 MIRLET7F1-201ENST00000362202 87 ntBASIC0.33□□□□□ -2.36
HOXC8P31273 RNU6-664P-201ENST00000362381 107 ntBASIC0.33□□□□□ -2.36
HOXC8P31273 RNU6-640P-201ENST00000363693 105 ntBASIC0.33□□□□□ -2.36
HOXC8P31273 RNU6-905P-201ENST00000384434 107 ntBASIC0.33□□□□□ -2.36
HOXC8P31273 SNORD4B-201ENST00000459083 72 ntBASIC0.33□□□□□ -2.36
HOXC8P31273 AC026421.1-201ENST00000519101 163 ntBASIC0.33□□□□□ -2.36
HOXC8P31273 MTRNR2L2-201ENST00000604882 87 ntBASIC0.33□□□□□ -2.36
HOXC8P31273 SNORA70.25-201ENST00000612741 95 ntBASIC0.33□□□□□ -2.36
HOXC8P31273 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.33□□□□□ -2.36
HOXC8P31273 MIR6755-201ENST00000619993 66 ntBASIC0.33□□□□□ -2.36
HOXC8P31273 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.33□□□□□ -2.36
HOXC8P31273 MIR617-201ENST00000385030 97 ntBASIC0.32□□□□□ -2.36
HOXC8P31273 MIR519E-201ENST00000385075 84 ntBASIC0.32□□□□□ -2.36
HOXC8P31273 Y_RNA.609-201ENST00000410669 89 ntBASIC0.32□□□□□ -2.36
HOXC8P31273 RNA5SP484-201ENST00000458857 111 ntBASIC0.32□□□□□ -2.36
HOXC8P31273 RNU7-74P-201ENST00000459104 62 ntBASIC0.32□□□□□ -2.36
HOXC8P31273 MALAT1.1-201ENST00000618249 95 ntBASIC0.32□□□□□ -2.36
HOXC8P31273 Y_RNA.30-201ENST00000362572 97 ntBASIC0.31□□□□□ -2.36
HOXC8P31273 RNU6-509P-201ENST00000363519 107 ntBASIC0.31□□□□□ -2.36
HOXC8P31273 MIR488-201ENST00000365739 83 ntBASIC0.31□□□□□ -2.36
HOXC8P31273 RNU6-132P-201ENST00000383863 107 ntBASIC0.31□□□□□ -2.36
HOXC8P31273 NAMPTP3-201ENST00000569273 224 ntBASIC0.31□□□□□ -2.36
HOXC8P31273 MIR4514-201ENST00000581410 57 ntBASIC0.31□□□□□ -2.36
HOXC8P31273 RNU1-29P-201ENST00000606574 126 ntBASIC0.31□□□□□ -2.36
HOXC8P31273 MIR6718-201ENST00000616153 80 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms