Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 RNU6-524P-201ENST00000384270 107 ntBASIC-0.06□□□□□ -2.42
COL5A3P25940 SNORA32.3-201ENST00000384772 121 ntBASIC-0.06□□□□□ -2.42
COL5A3P25940 SNORA40-201ENST00000388090 126 ntBASIC-0.06□□□□□ -2.42
COL5A3P25940 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
COL5A3P25940 AC093423.1-201ENST00000440817 142 ntBASIC-0.06□□□□□ -2.42
COL5A3P25940 RNU7-165P-201ENST00000458864 60 ntBASIC-0.06□□□□□ -2.42
COL5A3P25940 RNU7-13P-201ENST00000516413 62 ntBASIC-0.06□□□□□ -2.42
COL5A3P25940 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.06□□□□□ -2.42
COL5A3P25940 AC084368.1-201ENST00000620935 65 ntBASIC-0.06□□□□□ -2.42
COL5A3P25940 AL162726.3-218ENST00000636401 95 ntBASIC-0.06□□□□□ -2.42
COL5A3P25940 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 RNU1-141P-201ENST00000364623 158 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 RNU6-929P-201ENST00000384429 107 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 MIR548D2-201ENST00000384955 97 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 MIR181B2-201ENST00000385004 89 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 MIR519E-201ENST00000385075 84 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 MIR519A1-201ENST00000385257 85 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 RNU6-257P-201ENST00000410238 98 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.07□□□□□ -2.42
COL5A3P25940 RNU7-200P-201ENST00000516105 62 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 RNU6-86P-201ENST00000606534 107 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 AC069503.3-201ENST00000618674 145 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 SNORD38.1-201ENST00000363863 68 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 MIR569-201ENST00000385228 96 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 AL158147.1-201ENST00000443970 75 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 U7.6-201ENST00000610841 64 ntBASIC-0.07□□□□□ -2.42
COL5A3P25940 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 RNU6-957P-201ENST00000363652 99 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 RNU6-756P-201ENST00000383997 107 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 MIR548A1-201ENST00000385041 97 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 MIR548G-201ENST00000408442 89 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 RNU6-719P-201ENST00000516671 104 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 YWHAEP2-201ENST00000580066 112 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 RN7SL660P-201ENST00000614852 299 ntBASIC-0.08□□□□□ -2.42
COL5A3P25940 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.09□□□□□ -2.42
COL5A3P25940 MIR539-201ENST00000365690 78 ntBASIC-0.09□□□□□ -2.42
COL5A3P25940 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.09□□□□□ -2.42
COL5A3P25940 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.09□□□□□ -2.42
COL5A3P25940 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.09□□□□□ -2.42
COL5A3P25940 AC006210.1-201ENST00000424882 111 ntBASIC-0.09□□□□□ -2.42
COL5A3P25940 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.09□□□□□ -2.42
COL5A3P25940 RNU6-346P-201ENST00000516288 111 ntBASIC-0.09□□□□□ -2.42
COL5A3P25940 CR383656.4-201ENST00000546909 122 ntBASIC-0.09□□□□□ -2.42
COL5A3P25940 MIR4536-1-201ENST00000583537 88 ntBASIC-0.09□□□□□ -2.42
COL5A3P25940 RNU6-832P-201ENST00000363319 107 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 SNORA18.1-201ENST00000363418 128 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 U8.6-201ENST00000364939 135 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 SNORD58C-201ENST00000365223 64 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 RNA5SP484-201ENST00000458857 111 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 MIR2113-201ENST00000459007 91 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 AC007012.1-201ENST00000567192 175 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 MIR4679-2-201ENST00000578358 77 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 MIR3613-201ENST00000579844 87 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 MIR548AG2-201ENST00000581228 64 ntBASIC-0.1□□□□□ -2.42
COL5A3P25940 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.1□□□□□ -2.43
COL5A3P25940 RNU6-480P-201ENST00000384332 107 ntBASIC-0.1□□□□□ -2.43
COL5A3P25940 SNORA75.1-201ENST00000391130 148 ntBASIC-0.1□□□□□ -2.43
COL5A3P25940 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.1□□□□□ -2.43
COL5A3P25940 NAMPTP3-201ENST00000569273 224 ntBASIC-0.1□□□□□ -2.43
COL5A3P25940 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.1□□□□□ -2.43
COL5A3P25940 U6.100-201ENST00000636230 99 ntBASIC-0.1□□□□□ -2.43
COL5A3P25940 MIR20A-201ENST00000362279 71 ntBASIC-0.11□□□□□ -2.43
COL5A3P25940 MT-TY-201ENST00000387409 66 ntBASIC-0.11□□□□□ -2.43
COL5A3P25940 RNU6-971P-201ENST00000516920 106 ntBASIC-0.11□□□□□ -2.43
COL5A3P25940 RNU7-188P-201ENST00000517063 64 ntBASIC-0.11□□□□□ -2.43
COL5A3P25940 AL157777.2-201ENST00000258070 137 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 RNU6-161P-201ENST00000363051 106 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 MIR216B-201ENST00000390186 82 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 RNU6-816P-201ENST00000390914 107 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 AC109327.2-201ENST00000448339 378 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 RNU6-772P-201ENST00000516042 105 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 AC068339.1-201ENST00000526965 141 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 MIR4696-201ENST00000581431 70 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 AL670379.3-201ENST00000605040 251 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.12□□□□□ -2.43
COL5A3P25940 SNORD114-29-201ENST00000364819 70 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 SNORD115-44-201ENST00000365391 82 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 MIR106A-201ENST00000384870 81 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 AL161932.1-201ENST00000437408 146 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 SNORA25.13-201ENST00000516395 103 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.13□□□□□ -2.43
COL5A3P25940 MIR4473-201ENST00000583731 91 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms