Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 Y_RNA.594-201ENST00000410373 140 ntBASIC-3.8□□□□□ -3.02
HMGA1P17096 AC018645.2-201ENST00000609151 472 ntBASIC-3.8□□□□□ -3.02
HMGA1P17096 MIR4773-1-201ENST00000637203 78 ntBASIC-3.8□□□□□ -3.02
HMGA1P17096 RNU6-834P-201ENST00000362367 110 ntBASIC-3.81□□□□□ -3.02
HMGA1P17096 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.81□□□□□ -3.02
HMGA1P17096 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.81□□□□□ -3.02
HMGA1P17096 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.81□□□□□ -3.02
HMGA1P17096 Y_RNA.176-201ENST00000363815 109 ntBASIC-3.82□□□□□ -3.02
HMGA1P17096 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.82□□□□□ -3.02
HMGA1P17096 SNORA24B-201ENST00000384176 131 ntBASIC-3.82□□□□□ -3.02
HMGA1P17096 Y_RNA.474-201ENST00000384341 102 ntBASIC-3.82□□□□□ -3.02
HMGA1P17096 Y_RNA.530-201ENST00000384587 101 ntBASIC-3.82□□□□□ -3.02
HMGA1P17096 MIR581-201ENST00000384895 96 ntBASIC-3.82□□□□□ -3.02
HMGA1P17096 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.82□□□□□ -3.02
HMGA1P17096 AC107308.1-201ENST00000615897 301 ntBASIC-3.82□□□□□ -3.02
HMGA1P17096 MIR3662-201ENST00000637030 95 ntBASIC-3.82□□□□□ -3.02
HMGA1P17096 MIR369-201ENST00000362155 70 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 RNU6-1272P-201ENST00000362776 107 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 Y_RNA.152-201ENST00000363578 100 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 Y_RNA.414-201ENST00000384011 101 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 RNU6-937P-201ENST00000384325 106 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 RNU6-800P-201ENST00000384473 103 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 MIR521-2-201ENST00000384818 87 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 MIR628-201ENST00000385229 95 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 RNU6-1068P-201ENST00000410958 103 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 MTND1P1-201ENST00000445453 368 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 MIR4536-1-201ENST00000583537 88 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 AC006254.2-201ENST00000603259 279 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 AL157392.4-201ENST00000609756 345 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 AL132765.2-201ENST00000610812 351 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 AC073114.1-201ENST00000612027 490 ntBASIC-3.83□□□□□ -3.02
HMGA1P17096 MIR624-201ENST00000385217 97 ntBASIC-3.84□□□□□ -3.02
HMGA1P17096 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.84□□□□□ -3.02
HMGA1P17096 SNORA79-201ENST00000408376 140 ntBASIC-3.84□□□□□ -3.02
HMGA1P17096 RNU6-648P-201ENST00000410190 107 ntBASIC-3.84□□□□□ -3.02
HMGA1P17096 MIR3170-201ENST00000582699 77 ntBASIC-3.84□□□□□ -3.02
HMGA1P17096 RNU6-561P-201ENST00000516222 102 ntBASIC-3.85□□□□□ -3.03
HMGA1P17096 RNU6-311P-201ENST00000516224 102 ntBASIC-3.85□□□□□ -3.03
HMGA1P17096 C8orf59P2-201ENST00000603441 271 ntBASIC-3.85□□□□□ -3.03
HMGA1P17096 RNY1P1-201ENST00000364372 112 ntBASIC-3.86□□□□□ -3.03
HMGA1P17096 RNU6-458P-201ENST00000384179 107 ntBASIC-3.86□□□□□ -3.03
HMGA1P17096 Y_RNA.605-201ENST00000410577 105 ntBASIC-3.86□□□□□ -3.03
HMGA1P17096 RNU6-651P-201ENST00000411040 105 ntBASIC-3.86□□□□□ -3.03
HMGA1P17096 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-3.86□□□□□ -3.03
HMGA1P17096 RNU6-453P-201ENST00000516819 85 ntBASIC-3.86□□□□□ -3.03
HMGA1P17096 U6.58-201ENST00000613107 107 ntBASIC-3.86□□□□□ -3.03
HMGA1P17096 MTND5P26-201ENST00000426018 1752 ntBASIC-3.86□□□□□ -3.03
HMGA1P17096 Y_RNA.83-201ENST00000363005 113 ntBASIC-3.87□□□□□ -3.03
HMGA1P17096 RNU6-1050P-201ENST00000410388 107 ntBASIC-3.87□□□□□ -3.03
HMGA1P17096 RNU6-340P-201ENST00000364005 107 ntBASIC-3.88□□□□□ -3.03
HMGA1P17096 RNU6-120P-201ENST00000516077 103 ntBASIC-3.88□□□□□ -3.03
HMGA1P17096 RNU6-1088P-201ENST00000516850 104 ntBASIC-3.88□□□□□ -3.03
HMGA1P17096 RNU6-1000P-201ENST00000391066 106 ntBASIC-3.89□□□□□ -3.03
HMGA1P17096 RNY3P8-201ENST00000411366 126 ntBASIC-3.89□□□□□ -3.03
HMGA1P17096 RNU6-976P-201ENST00000516086 111 ntBASIC-3.89□□□□□ -3.03
HMGA1P17096 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.89□□□□□ -3.03
HMGA1P17096 Y_RNA.773-201ENST00000607168 90 ntBASIC-3.89□□□□□ -3.03
HMGA1P17096 Y_RNA.526-201ENST00000384572 110 ntBASIC-3.9□□□□□ -3.03
HMGA1P17096 RNU6-906P-201ENST00000384700 70 ntBASIC-3.9□□□□□ -3.03
HMGA1P17096 AL691482.2-201ENST00000457453 84 ntBASIC-3.9□□□□□ -3.03
HMGA1P17096 RNU6-62P-201ENST00000516526 102 ntBASIC-3.9□□□□□ -3.03
HMGA1P17096 RNU6-835P-201ENST00000516974 104 ntBASIC-3.9□□□□□ -3.03
HMGA1P17096 AL512310.12-203ENST00000640543 90 ntBASIC-3.9□□□□□ -3.03
HMGA1P17096 Y_RNA.560-201ENST00000384689 102 ntBASIC-3.91□□□□□ -3.04
HMGA1P17096 Y_RNA.584-201ENST00000391090 114 ntBASIC-3.91□□□□□ -3.04
HMGA1P17096 SNORA7.5-201ENST00000410672 110 ntBASIC-3.91□□□□□ -3.04
HMGA1P17096 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-3.91□□□□□ -3.04
HMGA1P17096 SNORD116-25-201ENST00000516517 92 ntBASIC-3.91□□□□□ -3.04
HMGA1P17096 MTCO2P4-201ENST00000517968 247 ntBASIC-3.91□□□□□ -3.04
HMGA1P17096 Y_RNA.772-201ENST00000606692 102 ntBASIC-3.91□□□□□ -3.04
HMGA1P17096 U2.1-201ENST00000618978 145 ntBASIC-3.91□□□□□ -3.04
HMGA1P17096 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.92□□□□□ -3.04
HMGA1P17096 Y_RNA.409-201ENST00000383990 98 ntBASIC-3.92□□□□□ -3.04
HMGA1P17096 RNU6-106P-201ENST00000384405 107 ntBASIC-3.92□□□□□ -3.04
HMGA1P17096 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-3.92□□□□□ -3.04
HMGA1P17096 RNU6-1051P-201ENST00000365471 102 ntBASIC-3.93□□□□□ -3.04
HMGA1P17096 Y_RNA.404-201ENST00000383978 102 ntBASIC-3.93□□□□□ -3.04
HMGA1P17096 RNU6-1016P-201ENST00000516689 94 ntBASIC-3.93□□□□□ -3.04
HMGA1P17096 Y_RNA.169-201ENST00000363745 96 ntBASIC-3.94□□□□□ -3.04
HMGA1P17096 RNU6-1103P-201ENST00000384150 107 ntBASIC-3.94□□□□□ -3.04
HMGA1P17096 AL731563.1-201ENST00000442202 214 ntBASIC-3.94□□□□□ -3.04
HMGA1P17096 AC005899.2-201ENST00000584353 90 ntBASIC-3.94□□□□□ -3.04
HMGA1P17096 SNORD38.1-201ENST00000363863 68 ntBASIC-3.95□□□□□ -3.04
HMGA1P17096 RNU6-598P-201ENST00000364017 105 ntBASIC-3.95□□□□□ -3.04
HMGA1P17096 RNU6-662P-201ENST00000384253 104 ntBASIC-3.95□□□□□ -3.04
HMGA1P17096 AC096644.2-201ENST00000429278 159 ntBASIC-3.95□□□□□ -3.04
HMGA1P17096 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-3.95□□□□□ -3.04
HMGA1P17096 RNA5SP236-201ENST00000516169 116 ntBASIC-3.95□□□□□ -3.04
HMGA1P17096 RNU7-6P-201ENST00000516845 62 ntBASIC-3.95□□□□□ -3.04
HMGA1P17096 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.96□□□□□ -3.04
HMGA1P17096 MIR1255B1-201ENST00000636325 63 ntBASIC-3.96□□□□□ -3.04
HMGA1P17096 RNU6-247P-201ENST00000362636 107 ntBASIC-3.97□□□□□ -3.04
HMGA1P17096 MTND3P2-201ENST00000438452 342 ntBASIC-3.97□□□□□ -3.04
HMGA1P17096 RNU6-307P-201ENST00000516743 106 ntBASIC-3.97□□□□□ -3.04
HMGA1P17096 RNU6-566P-201ENST00000516790 107 ntBASIC-3.97□□□□□ -3.04
HMGA1P17096 AC025521.1-201ENST00000621624 286 ntBASIC-3.97□□□□□ -3.04
HMGA1P17096 AC068137.3-201ENST00000639191 341 ntBASIC-3.97□□□□□ -3.04
HMGA1P17096 SNORA27.2-201ENST00000363365 126 ntBASIC-3.98□□□□□ -3.05
HMGA1P17096 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.98□□□□□ -3.05
HMGA1P17096 Y_RNA.467-201ENST00000384297 102 ntBASIC-3.98□□□□□ -3.05
Retrieved 100 of 98,524 protein–RNA pairs in 304.7 ms