Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU6-617P-201ENST00000516147 107 ntBASIC0.37□□□□□ -2.35
HLA-DOBP13765 RNU6-473P-201ENST00000516164 107 ntBASIC0.37□□□□□ -2.35
HLA-DOBP13765 RNU6-65P-201ENST00000516332 98 ntBASIC0.37□□□□□ -2.35
HLA-DOBP13765 RNU6-1049P-201ENST00000516414 107 ntBASIC0.37□□□□□ -2.35
HLA-DOBP13765 AC073869.9-201ENST00000641610 120 ntBASIC0.37□□□□□ -2.35
HLA-DOBP13765 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
HLA-DOBP13765 RNU6-509P-201ENST00000363519 107 ntBASIC0.36□□□□□ -2.35
HLA-DOBP13765 MIR617-201ENST00000385030 97 ntBASIC0.36□□□□□ -2.35
HLA-DOBP13765 MIR216A-201ENST00000385063 110 ntBASIC0.36□□□□□ -2.35
HLA-DOBP13765 MIR4536-1-201ENST00000583537 88 ntBASIC0.36□□□□□ -2.35
HLA-DOBP13765 U7.3-201ENST00000616123 62 ntBASIC0.36□□□□□ -2.35
HLA-DOBP13765 MIR6513-201ENST00000621188 64 ntBASIC0.36□□□□□ -2.35
HLA-DOBP13765 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
HLA-DOBP13765 RNU6-153P-201ENST00000364422 104 ntBASIC0.35□□□□□ -2.35
HLA-DOBP13765 SNORD101-201ENST00000384027 73 ntBASIC0.35□□□□□ -2.35
HLA-DOBP13765 RNU6-269P-201ENST00000391077 97 ntBASIC0.35□□□□□ -2.35
HLA-DOBP13765 RNU7-85P-201ENST00000458851 63 ntBASIC0.35□□□□□ -2.35
HLA-DOBP13765 RNU6-75P-201ENST00000515944 104 ntBASIC0.35□□□□□ -2.35
HLA-DOBP13765 RNU6-287P-201ENST00000516230 98 ntBASIC0.35□□□□□ -2.35
HLA-DOBP13765 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
HLA-DOBP13765 RNU6-664P-201ENST00000362381 107 ntBASIC0.34□□□□□ -2.36
HLA-DOBP13765 Y_RNA.348-201ENST00000365403 103 ntBASIC0.34□□□□□ -2.36
HLA-DOBP13765 RNU6-519P-201ENST00000410590 108 ntBASIC0.34□□□□□ -2.36
HLA-DOBP13765 MIR2113-201ENST00000459007 91 ntBASIC0.34□□□□□ -2.36
HLA-DOBP13765 RNA5SP220-201ENST00000516298 104 ntBASIC0.34□□□□□ -2.36
HLA-DOBP13765 MIR4696-201ENST00000581431 70 ntBASIC0.34□□□□□ -2.36
HLA-DOBP13765 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.34□□□□□ -2.36
HLA-DOBP13765 AC243829.3-201ENST00000622177 108 ntBASIC0.34□□□□□ -2.36
HLA-DOBP13765 Y_RNA.207-201ENST00000364142 106 ntBASIC0.33□□□□□ -2.36
HLA-DOBP13765 Y_RNA.508-201ENST00000384502 114 ntBASIC0.33□□□□□ -2.36
HLA-DOBP13765 RNA5SP193-201ENST00000410353 107 ntBASIC0.33□□□□□ -2.36
HLA-DOBP13765 SNORD4B-201ENST00000459083 72 ntBASIC0.33□□□□□ -2.36
HLA-DOBP13765 MIR5706-201ENST00000579841 80 ntBASIC0.33□□□□□ -2.36
HLA-DOBP13765 MIR548AG2-201ENST00000581228 64 ntBASIC0.33□□□□□ -2.36
HLA-DOBP13765 Y_RNA.239-201ENST00000364444 113 ntBASIC0.32□□□□□ -2.36
HLA-DOBP13765 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
HLA-DOBP13765 MIR519E-201ENST00000385075 84 ntBASIC0.32□□□□□ -2.36
HLA-DOBP13765 MIR936-201ENST00000401264 98 ntBASIC0.32□□□□□ -2.36
HLA-DOBP13765 RNU6-168P-201ENST00000516189 101 ntBASIC0.32□□□□□ -2.36
HLA-DOBP13765 RNU6-162P-201ENST00000516228 103 ntBASIC0.32□□□□□ -2.36
HLA-DOBP13765 Y_RNA.677-201ENST00000516401 85 ntBASIC0.32□□□□□ -2.36
HLA-DOBP13765 AC022709.1-201ENST00000615967 87 ntBASIC0.32□□□□□ -2.36
HLA-DOBP13765 MIR6734-201ENST00000621166 68 ntBASIC0.32□□□□□ -2.36
HLA-DOBP13765 MIR103A1-201ENST00000362165 78 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 Y_RNA.290-201ENST00000364879 114 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 SNORA2A-201ENST00000383885 135 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 Y_RNA.423-201ENST00000384057 113 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 MIR216B-201ENST00000390186 82 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 MIR548U-201ENST00000390728 81 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 RNU6-935P-201ENST00000410371 100 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 RNU6-1057P-201ENST00000517162 102 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 MIR4711-201ENST00000578274 70 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 MIR4752-201ENST00000579672 72 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 MIR6755-201ENST00000619993 66 ntBASIC0.31□□□□□ -2.36
HLA-DOBP13765 RNU6-640P-201ENST00000363693 105 ntBASIC0.3□□□□□ -2.36
HLA-DOBP13765 RNU6-905P-201ENST00000384434 107 ntBASIC0.3□□□□□ -2.36
HLA-DOBP13765 MIR518E-201ENST00000385252 88 ntBASIC0.3□□□□□ -2.36
HLA-DOBP13765 RNU1-29P-201ENST00000606574 126 ntBASIC0.3□□□□□ -2.36
HLA-DOBP13765 U7.6-201ENST00000610841 64 ntBASIC0.3□□□□□ -2.36
HLA-DOBP13765 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.3□□□□□ -2.36
HLA-DOBP13765 MALAT1.1-201ENST00000618249 95 ntBASIC0.3□□□□□ -2.36
HLA-DOBP13765 MIR5087-201ENST00000635826 76 ntBASIC0.3□□□□□ -2.36
HLA-DOBP13765 RNU1-141P-201ENST00000364623 158 ntBASIC0.29□□□□□ -2.36
HLA-DOBP13765 RNA5SP89-201ENST00000410300 108 ntBASIC0.29□□□□□ -2.36
HLA-DOBP13765 AC006210.1-201ENST00000424882 111 ntBASIC0.29□□□□□ -2.36
HLA-DOBP13765 AC093423.1-201ENST00000440817 142 ntBASIC0.29□□□□□ -2.36
HLA-DOBP13765 RNA5SP484-201ENST00000458857 111 ntBASIC0.29□□□□□ -2.36
HLA-DOBP13765 AC243829.6-201ENST00000612652 106 ntBASIC0.29□□□□□ -2.36
HLA-DOBP13765 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
HLA-DOBP13765 RNU6-811P-201ENST00000384069 107 ntBASIC0.28□□□□□ -2.36
HLA-DOBP13765 RNU6-42P-201ENST00000384165 107 ntBASIC0.28□□□□□ -2.36
HLA-DOBP13765 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
HLA-DOBP13765 MIR760-201ENST00000390220 80 ntBASIC0.28□□□□□ -2.36
HLA-DOBP13765 SNORD110-201ENST00000408189 75 ntBASIC0.28□□□□□ -2.36
HLA-DOBP13765 Y_RNA.609-201ENST00000410669 89 ntBASIC0.28□□□□□ -2.36
HLA-DOBP13765 NAMPTP3-201ENST00000569273 224 ntBASIC0.28□□□□□ -2.36
HLA-DOBP13765 SNORA70.25-201ENST00000612741 95 ntBASIC0.28□□□□□ -2.36
HLA-DOBP13765 MIRLET7F1-201ENST00000362202 87 ntBASIC0.27□□□□□ -2.37
HLA-DOBP13765 SNORA9.1-201ENST00000362412 131 ntBASIC0.27□□□□□ -2.37
HLA-DOBP13765 Y_RNA.190-201ENST00000363964 101 ntBASIC0.27□□□□□ -2.37
HLA-DOBP13765 AC073261.1-201ENST00000429409 121 ntBASIC0.27□□□□□ -2.37
HLA-DOBP13765 AC026421.1-201ENST00000519101 163 ntBASIC0.27□□□□□ -2.37
HLA-DOBP13765 MIR3064-201ENST00000581130 66 ntBASIC0.27□□□□□ -2.37
HLA-DOBP13765 AC104996.3-201ENST00000590718 94 ntBASIC0.27□□□□□ -2.37
HLA-DOBP13765 RNA5SP128-201ENST00000365305 116 ntBASIC0.26□□□□□ -2.37
HLA-DOBP13765 RNU6-132P-201ENST00000383863 107 ntBASIC0.26□□□□□ -2.37
HLA-DOBP13765 U3.27-201ENST00000391237 200 ntBASIC0.26□□□□□ -2.37
HLA-DOBP13765 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
HLA-DOBP13765 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
HLA-DOBP13765 AC069113.3-201ENST00000521019 150 ntBASIC0.26□□□□□ -2.37
HLA-DOBP13765 AC069503.3-201ENST00000618674 145 ntBASIC0.26□□□□□ -2.37
HLA-DOBP13765 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.26□□□□□ -2.37
HLA-DOBP13765 Y_RNA.220-201ENST00000364244 109 ntBASIC0.25□□□□□ -2.37
HLA-DOBP13765 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
HLA-DOBP13765 MIR451A-201ENST00000385059 72 ntBASIC0.25□□□□□ -2.37
HLA-DOBP13765 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
HLA-DOBP13765 MIR4460-201ENST00000577862 86 ntBASIC0.25□□□□□ -2.37
HLA-DOBP13765 RNU6-815P-201ENST00000384080 113 ntBASIC0.24□□□□□ -2.37
HLA-DOBP13765 Y_RNA.491-201ENST00000384417 107 ntBASIC0.24□□□□□ -2.37
HLA-DOBP13765 MIR488-201ENST00000365739 83 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 272.6 ms