Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 RNU6-935P-201ENST00000410371 100 ntBASIC1.52□□□□□ -2.17
NEFMP07197 OR2A41P-201ENST00000473586 105 ntBASIC1.52□□□□□ -2.17
NEFMP07197 AC087343.1-201ENST00000477341 475 ntBASIC1.52□□□□□ -2.17
NEFMP07197 RNU6-303P-201ENST00000517091 106 ntBASIC1.52□□□□□ -2.17
NEFMP07197 MIR4295-201ENST00000585286 85 ntBASIC1.52□□□□□ -2.17
NEFMP07197 MIR6504-201ENST00000613520 61 ntBASIC1.52□□□□□ -2.17
NEFMP07197 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.51□□□□□ -2.17
NEFMP07197 RNA5SP245-201ENST00000364239 121 ntBASIC1.51□□□□□ -2.17
NEFMP07197 MIR520F-201ENST00000384824 87 ntBASIC1.51□□□□□ -2.17
NEFMP07197 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.51□□□□□ -2.17
NEFMP07197 SNORD90-201ENST00000391145 111 ntBASIC1.5□□□□□ -2.17
NEFMP07197 SNORD115-44-201ENST00000365391 82 ntBASIC1.49□□□□□ -2.17
NEFMP07197 YWHAEP2-201ENST00000580066 112 ntBASIC1.49□□□□□ -2.17
NEFMP07197 YWHAEP3-201ENST00000582767 121 ntBASIC1.49□□□□□ -2.17
NEFMP07197 Y_RNA.12-201ENST00000362393 112 ntBASIC1.48□□□□□ -2.17
NEFMP07197 Y_RNA.207-201ENST00000364142 106 ntBASIC1.48□□□□□ -2.17
NEFMP07197 AC002429.1-201ENST00000437672 148 ntBASIC1.48□□□□□ -2.17
NEFMP07197 SCARNA18B-201ENST00000458806 135 ntBASIC1.48□□□□□ -2.17
NEFMP07197 RNU6-1057P-201ENST00000517162 102 ntBASIC1.48□□□□□ -2.17
NEFMP07197 AL136317.1-201ENST00000612653 226 ntBASIC1.48□□□□□ -2.17
NEFMP07197 Y_RNA.788-201ENST00000622394 112 ntBASIC1.48□□□□□ -2.17
NEFMP07197 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NEFMP07197 SNORA25-201ENST00000384384 134 ntBASIC1.47□□□□□ -2.17
NEFMP07197 RNU6-411P-201ENST00000384451 107 ntBASIC1.47□□□□□ -2.17
NEFMP07197 Y_RNA.532-201ENST00000384590 113 ntBASIC1.47□□□□□ -2.17
NEFMP07197 RMST_2.1-201ENST00000617263 136 ntBASIC1.47□□□□□ -2.17
NEFMP07197 uc_338.16-201ENST00000621804 95 ntBASIC1.47□□□□□ -2.17
NEFMP07197 MIR96-201ENST00000362288 78 ntBASIC1.46□□□□□ -2.18
NEFMP07197 Y_RNA.32-201ENST00000362589 110 ntBASIC1.46□□□□□ -2.18
NEFMP07197 SNORD114-22-201ENST00000365423 72 ntBASIC1.46□□□□□ -2.18
NEFMP07197 MIR451A-201ENST00000385059 72 ntBASIC1.46□□□□□ -2.18
NEFMP07197 AC074348.1-201ENST00000426503 132 ntBASIC1.46□□□□□ -2.18
NEFMP07197 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.46□□□□□ -2.18
NEFMP07197 Y_RNA.681-201ENST00000516445 113 ntBASIC1.46□□□□□ -2.18
NEFMP07197 SNORA31.14-201ENST00000516728 116 ntBASIC1.46□□□□□ -2.18
NEFMP07197 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
NEFMP07197 RNU7-13P-201ENST00000516413 62 ntBASIC1.45□□□□□ -2.18
NEFMP07197 MIR4452-201ENST00000583004 71 ntBASIC1.45□□□□□ -2.18
NEFMP07197 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.45□□□□□ -2.18
NEFMP07197 SNORD114-27-201ENST00000363766 70 ntBASIC1.44□□□□□ -2.18
NEFMP07197 RNU6-681P-201ENST00000364012 104 ntBASIC1.44□□□□□ -2.18
NEFMP07197 U3.27-201ENST00000391237 200 ntBASIC1.44□□□□□ -2.18
NEFMP07197 snoU13.17-201ENST00000458802 104 ntBASIC1.44□□□□□ -2.18
NEFMP07197 AC139453.2-201ENST00000487255 133 ntBASIC1.44□□□□□ -2.18
NEFMP07197 RNU6-1110P-201ENST00000516462 101 ntBASIC1.44□□□□□ -2.18
NEFMP07197 RNU6-135P-201ENST00000516769 101 ntBASIC1.44□□□□□ -2.18
NEFMP07197 MIR3134-201ENST00000579433 74 ntBASIC1.44□□□□□ -2.18
NEFMP07197 MIR4484-201ENST00000582855 83 ntBASIC1.44□□□□□ -2.18
NEFMP07197 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
NEFMP07197 MIR489-201ENST00000384923 84 ntBASIC1.43□□□□□ -2.18
NEFMP07197 RNU2-59P-201ENST00000410482 191 ntBASIC1.43□□□□□ -2.18
NEFMP07197 FABP5P4-201ENST00000437203 171 ntBASIC1.43□□□□□ -2.18
NEFMP07197 MIR3140-201ENST00000583685 90 ntBASIC1.43□□□□□ -2.18
NEFMP07197 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
NEFMP07197 SNORD115-24-201ENST00000363528 82 ntBASIC1.42□□□□□ -2.18
NEFMP07197 RNA5SP403-201ENST00000363598 108 ntBASIC1.42□□□□□ -2.18
NEFMP07197 AC097510.1-201ENST00000510945 133 ntBASIC1.42□□□□□ -2.18
NEFMP07197 RNU6-871P-201ENST00000516122 100 ntBASIC1.42□□□□□ -2.18
NEFMP07197 RNA5SP404-201ENST00000517118 132 ntBASIC1.42□□□□□ -2.18
NEFMP07197 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
NEFMP07197 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.41□□□□□ -2.18
NEFMP07197 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
NEFMP07197 RNU6-340P-201ENST00000364005 107 ntBASIC1.41□□□□□ -2.18
NEFMP07197 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NEFMP07197 RNU6-287P-201ENST00000516230 98 ntBASIC1.41□□□□□ -2.18
NEFMP07197 RNU6-523P-201ENST00000516304 54 ntBASIC1.41□□□□□ -2.18
NEFMP07197 Y_RNA.36-201ENST00000362602 112 ntBASIC1.4□□□□□ -2.19
NEFMP07197 RNA5SP117-201ENST00000365294 118 ntBASIC1.4□□□□□ -2.19
NEFMP07197 SNORA24B-201ENST00000384176 131 ntBASIC1.4□□□□□ -2.19
NEFMP07197 MIR216B-201ENST00000390186 82 ntBASIC1.4□□□□□ -2.19
NEFMP07197 Y_RNA.606-201ENST00000410579 103 ntBASIC1.4□□□□□ -2.19
NEFMP07197 U7.7-201ENST00000459276 60 ntBASIC1.4□□□□□ -2.19
NEFMP07197 RNU6-70P-201ENST00000516438 60 ntBASIC1.4□□□□□ -2.19
NEFMP07197 Y_RNA.371-201ENST00000365591 113 ntBASIC1.39□□□□□ -2.19
NEFMP07197 MIR19B1-201ENST00000384829 87 ntBASIC1.39□□□□□ -2.19
NEFMP07197 MIR942-201ENST00000401111 86 ntBASIC1.39□□□□□ -2.19
NEFMP07197 MIR2113-201ENST00000459007 91 ntBASIC1.39□□□□□ -2.19
NEFMP07197 AC002350.1-201ENST00000490759 375 ntBASIC1.39□□□□□ -2.19
NEFMP07197 MIR200A-201ENST00000384875 90 ntBASIC1.38□□□□□ -2.19
NEFMP07197 SNORD105-201ENST00000386910 85 ntBASIC1.38□□□□□ -2.19
NEFMP07197 SNORD89-201ENST00000390981 114 ntBASIC1.38□□□□□ -2.19
NEFMP07197 RNU7-161P-201ENST00000517289 62 ntBASIC1.38□□□□□ -2.19
NEFMP07197 SNORD114-21-201ENST00000606412 72 ntBASIC1.38□□□□□ -2.19
NEFMP07197 U6.81-201ENST00000612550 106 ntBASIC1.38□□□□□ -2.19
NEFMP07197 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.38□□□□□ -2.19
NEFMP07197 RNU1-124P-201ENST00000363861 145 ntBASIC1.37□□□□□ -2.19
NEFMP07197 RNU6-1126P-201ENST00000384002 107 ntBASIC1.37□□□□□ -2.19
NEFMP07197 SNORA8.1-201ENST00000384250 140 ntBASIC1.37□□□□□ -2.19
NEFMP07197 RNU7-104P-201ENST00000459398 79 ntBASIC1.37□□□□□ -2.19
NEFMP07197 AC114801.3-201ENST00000510231 177 ntBASIC1.37□□□□□ -2.19
NEFMP07197 RNU6-469P-201ENST00000516253 101 ntBASIC1.37□□□□□ -2.19
NEFMP07197 RNU6-1015P-201ENST00000517121 99 ntBASIC1.37□□□□□ -2.19
NEFMP07197 RNU6-154P-201ENST00000384306 106 ntBASIC1.36□□□□□ -2.19
NEFMP07197 RNU6-587P-201ENST00000391282 106 ntBASIC1.36□□□□□ -2.19
NEFMP07197 RNU6-1052P-201ENST00000411398 104 ntBASIC1.36□□□□□ -2.19
NEFMP07197 snoU13.18-201ENST00000459483 104 ntBASIC1.36□□□□□ -2.19
NEFMP07197 RNU6-719P-201ENST00000516671 104 ntBASIC1.36□□□□□ -2.19
NEFMP07197 MIR3920-201ENST00000581751 86 ntBASIC1.36□□□□□ -2.19
NEFMP07197 RNU6-788P-201ENST00000390967 104 ntBASIC1.35□□□□□ -2.19
NEFMP07197 RNU6-1177P-201ENST00000391058 104 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms