Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RN7SKP295-201ENST00000517264 153 ntBASIC-2.17□□□□□ -2.76
APOBP04114 Y_RNA.462-201ENST00000384268 102 ntBASIC-2.17□□□□□ -2.76
APOBP04114 AC119751.7-201ENST00000600494 245 ntBASIC-2.17□□□□□ -2.76
APOBP04114 DLEU2_5.1-201ENST00000615567 84 ntBASIC-2.17□□□□□ -2.76
APOBP04114 RNU6-157P-201ENST00000383957 107 ntBASIC-2.17□□□□□ -2.76
APOBP04114 MIR3913-1-201ENST00000577744 102 ntBASIC-2.17□□□□□ -2.76
APOBP04114 AC048344.4-201ENST00000619744 527 ntBASIC-2.17□□□□□ -2.76
APOBP04114 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-2.17□□□□□ -2.76
APOBP04114 AC099654.13-201ENST00000639774 207 ntBASIC-2.17□□□□□ -2.76
APOBP04114 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.18□□□□□ -2.76
APOBP04114 MIR548C-201ENST00000384815 97 ntBASIC-2.18□□□□□ -2.76
APOBP04114 RNU6-763P-201ENST00000390865 106 ntBASIC-2.18□□□□□ -2.76
APOBP04114 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.18□□□□□ -2.76
APOBP04114 SNORA17.4-201ENST00000391287 132 ntBASIC-2.18□□□□□ -2.76
APOBP04114 RNU6-176P-201ENST00000517196 105 ntBASIC-2.18□□□□□ -2.76
APOBP04114 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.18□□□□□ -2.76
APOBP04114 RNU6-68P-201ENST00000516576 104 ntBASIC-2.18□□□□□ -2.76
APOBP04114 Y_RNA.159-201ENST00000363674 87 ntBASIC-2.18□□□□□ -2.76
APOBP04114 MIR548I1-201ENST00000408810 149 ntBASIC-2.18□□□□□ -2.76
APOBP04114 RNY3P8-201ENST00000411366 126 ntBASIC-2.18□□□□□ -2.76
APOBP04114 MIR4424-201ENST00000585257 86 ntBASIC-2.18□□□□□ -2.76
APOBP04114 AC092747.3-201ENST00000603769 301 ntBASIC-2.18□□□□□ -2.76
APOBP04114 AC097520.1-201ENST00000624435 385 ntBASIC-2.18□□□□□ -2.76
APOBP04114 RNU7-187P-201ENST00000458985 68 ntBASIC-2.19□□□□□ -2.76
APOBP04114 AL512310.12-203ENST00000640543 90 ntBASIC-2.19□□□□□ -2.76
APOBP04114 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.19□□□□□ -2.76
APOBP04114 RNU6-523P-201ENST00000516304 54 ntBASIC-2.19□□□□□ -2.76
APOBP04114 RNU7-151P-201ENST00000516930 53 ntBASIC-2.19□□□□□ -2.76
APOBP04114 AC138907.4-201ENST00000570107 226 ntBASIC-2.19□□□□□ -2.76
APOBP04114 MTND5P26-201ENST00000426018 1752 ntBASIC-2.19□□□□□ -2.76
APOBP04114 AC139453.2-201ENST00000487255 133 ntBASIC-2.19□□□□□ -2.76
APOBP04114 MRPS35P2-201ENST00000508242 191 ntBASIC-2.19□□□□□ -2.76
APOBP04114 MIR1244-1-201ENST00000612829 85 ntBASIC-2.19□□□□□ -2.76
APOBP04114 AC013791.1-201ENST00000616619 62 ntBASIC-2.19□□□□□ -2.76
APOBP04114 MIR1244-3-201ENST00000635744 85 ntBASIC-2.19□□□□□ -2.76
APOBP04114 MIR1244-2-201ENST00000636449 85 ntBASIC-2.19□□□□□ -2.76
APOBP04114 MIR1244-4-202ENST00000636813 85 ntBASIC-2.19□□□□□ -2.76
APOBP04114 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.2□□□□□ -2.76
APOBP04114 RNU6-842P-201ENST00000384269 107 ntBASIC-2.2□□□□□ -2.76
APOBP04114 Y_RNA.526-201ENST00000384572 110 ntBASIC-2.2□□□□□ -2.76
APOBP04114 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.2□□□□□ -2.76
APOBP04114 SNORD90-201ENST00000391145 111 ntBASIC-2.2□□□□□ -2.76
APOBP04114 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.2□□□□□ -2.76
APOBP04114 RNU6-598P-201ENST00000364017 105 ntBASIC-2.2□□□□□ -2.76
APOBP04114 Y_RNA.472-201ENST00000384322 102 ntBASIC-2.2□□□□□ -2.76
APOBP04114 AC006386.1-201ENST00000619436 415 ntBASIC-2.2□□□□□ -2.76
APOBP04114 SNORD116-11-201ENST00000383882 92 ntBASIC-2.21□□□□□ -2.76
APOBP04114 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.21□□□□□ -2.76
APOBP04114 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.21□□□□□ -2.76
APOBP04114 RNU6-649P-201ENST00000384463 107 ntBASIC-2.21□□□□□ -2.76
APOBP04114 SNORD4B-201ENST00000459083 72 ntBASIC-2.21□□□□□ -2.76
APOBP04114 RNU6-1192P-201ENST00000612197 107 ntBASIC-2.21□□□□□ -2.76
APOBP04114 RNU6-489P-201ENST00000618289 107 ntBASIC-2.21□□□□□ -2.76
APOBP04114 RNU6-931P-201ENST00000363850 107 ntBASIC-2.21□□□□□ -2.76
APOBP04114 RNU6-422P-201ENST00000384632 107 ntBASIC-2.21□□□□□ -2.76
APOBP04114 SNORA7.5-201ENST00000410672 110 ntBASIC-2.21□□□□□ -2.76
APOBP04114 Y_RNA.97-201ENST00000363094 102 ntBASIC-2.22□□□□□ -2.76
APOBP04114 MTND4LP1-201ENST00000446263 157 ntBASIC-2.22□□□□□ -2.76
APOBP04114 Y_RNA.639-201ENST00000458981 102 ntBASIC-2.22□□□□□ -2.76
APOBP04114 Y_RNA.378-201ENST00000365652 113 ntBASIC-2.22□□□□□ -2.76
APOBP04114 RNY4P18-201ENST00000391107 89 ntBASIC-2.22□□□□□ -2.76
APOBP04114 AC018645.2-201ENST00000609151 472 ntBASIC-2.22□□□□□ -2.76
APOBP04114 RNU6-616P-201ENST00000384353 107 ntBASIC-2.22□□□□□ -2.77
APOBP04114 AL157392.4-201ENST00000609756 345 ntBASIC-2.22□□□□□ -2.77
APOBP04114 RNU5E-5P-201ENST00000365379 116 ntBASIC-2.23□□□□□ -2.77
APOBP04114 AC082651.2-201ENST00000496833 166 ntBASIC-2.23□□□□□ -2.77
APOBP04114 MTND3P12-201ENST00000559068 328 ntBASIC-2.23□□□□□ -2.77
APOBP04114 SNORD116-12-201ENST00000384468 92 ntBASIC-2.23□□□□□ -2.77
APOBP04114 MIR3064-201ENST00000581130 66 ntBASIC-2.23□□□□□ -2.77
APOBP04114 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-2.23□□□□□ -2.77
APOBP04114 SNORD38.1-201ENST00000363863 68 ntBASIC-2.23□□□□□ -2.77
APOBP04114 MIR4659A-201ENST00000580269 81 ntBASIC-2.23□□□□□ -2.77
APOBP04114 DEFB117-201ENST00000602356 141 ntBASIC-2.23□□□□□ -2.77
APOBP04114 RNU6-854P-201ENST00000364036 107 ntBASIC-2.24□□□□□ -2.77
APOBP04114 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.24□□□□□ -2.77
APOBP04114 MIR122-201ENST00000385044 85 ntBASIC-2.24□□□□□ -2.77
APOBP04114 RNU6-383P-201ENST00000410864 94 ntBASIC-2.24□□□□□ -2.77
APOBP04114 SNORD63.2-201ENST00000516303 64 ntBASIC-2.24□□□□□ -2.77
APOBP04114 MTCO2P4-201ENST00000517968 247 ntBASIC-2.24□□□□□ -2.77
APOBP04114 AC016911.1-201ENST00000613297 452 ntBASIC-2.24□□□□□ -2.77
APOBP04114 Y_RNA.570-201ENST00000384750 101 ntBASIC-2.24□□□□□ -2.77
APOBP04114 SNORA20.3-201ENST00000516880 132 ntBASIC-2.24□□□□□ -2.77
APOBP04114 RNU6-1028P-201ENST00000517164 93 ntBASIC-2.24□□□□□ -2.77
APOBP04114 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.24□□□□□ -2.77
APOBP04114 AL731563.1-201ENST00000442202 214 ntBASIC-2.24□□□□□ -2.77
APOBP04114 C8orf59P2-201ENST00000603441 271 ntBASIC-2.24□□□□□ -2.77
APOBP04114 AL121895.2-201ENST00000619558 447 ntBASIC-2.24□□□□□ -2.77
APOBP04114 RNU6-1307P-201ENST00000391012 103 ntBASIC-2.25□□□□□ -2.77
APOBP04114 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-2.25□□□□□ -2.77
APOBP04114 AC084782.3-201ENST00000612282 578 ntBASIC-2.25□□□□□ -2.77
APOBP04114 RNU6-590P-201ENST00000365039 107 ntBASIC-2.25□□□□□ -2.77
APOBP04114 RNU6-38P-201ENST00000384085 107 ntBASIC-2.25□□□□□ -2.77
APOBP04114 RNU6-1103P-201ENST00000384150 107 ntBASIC-2.25□□□□□ -2.77
APOBP04114 U6.106-201ENST00000636360 105 ntBASIC-2.25□□□□□ -2.77
APOBP04114 MIR2053-201ENST00000459295 91 ntBASIC-2.25□□□□□ -2.77
APOBP04114 RNU6-273P-201ENST00000516937 96 ntBASIC-2.25□□□□□ -2.77
APOBP04114 AC002553.4-201ENST00000616896 331 ntBASIC-2.25□□□□□ -2.77
APOBP04114 RNU6-300P-201ENST00000459080 104 ntBASIC-2.26□□□□□ -2.77
APOBP04114 RNY4P34-201ENST00000364779 95 ntBASIC-2.26□□□□□ -2.77
APOBP04114 MIR548V-201ENST00000584165 80 ntBASIC-2.26□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms