Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 SNORD77B-201ENST00000391112 67 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 MIR548G-201ENST00000408442 89 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 RNU7-85P-201ENST00000458851 63 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 RNU6-570P-201ENST00000517051 105 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 SNORD58B-201ENST00000607313 66 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 AL606534.2-204ENST00000635008 178 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 AC021753.1-201ENST00000635724 168 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 MIR335-201ENST00000362173 94 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 RNU6-309P-201ENST00000364573 106 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 RNU6-382P-201ENST00000365181 106 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 RNU6-260P-201ENST00000384092 107 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 SNORA24B-201ENST00000384176 131 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 MIR520D-201ENST00000385002 87 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 MIR624-201ENST00000385217 97 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 MIR759-201ENST00000390224 91 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
COL1A1P02452 RNU6-121P-201ENST00000410525 99 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 MIR4490-201ENST00000582647 84 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 RNU6-90P-201ENST00000606352 106 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 AC037487.3-201ENST00000606668 112 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 AL512310.12-203ENST00000640543 90 ntBASIC-0.8□□□□□ -2.54
COL1A1P02452 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 RNU6-806P-201ENST00000365147 105 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 RNY4P28-201ENST00000365281 93 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 RNU6-326P-201ENST00000365480 107 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 RNU6-608P-201ENST00000383927 104 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 SNORD115-46-201ENST00000390982 71 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 MIR1277-201ENST00000408536 78 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 AC018880.2-201ENST00000414265 201 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 AL121914.1-201ENST00000450188 156 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 RNU6-518P-201ENST00000516056 96 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 RNY3P16-201ENST00000516338 101 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 RNY4P20-201ENST00000516678 93 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 AC113139.1-201ENST00000605049 239 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 MIR376A1-201ENST00000616574 68 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 U6.106-201ENST00000636360 105 ntBASIC-0.81□□□□□ -2.54
COL1A1P02452 RNU6-79P-201ENST00000362511 107 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 SNORD115-31-201ENST00000365318 82 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 MIR548A1-201ENST00000385041 97 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 MIR616-201ENST00000385293 97 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 MT-TW-201ENST00000387382 68 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 RNU4-88P-201ENST00000411220 86 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 MTND5P22-201ENST00000458380 195 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 SNORD116-25-201ENST00000516517 92 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 RNU6-62P-201ENST00000516526 102 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 RNU6-118P-201ENST00000516552 102 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 MIR4536-1-201ENST00000583537 88 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 MIR3657-201ENST00000584818 117 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 MIR6509-201ENST00000614603 85 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 MIR4773-1-201ENST00000637203 78 ntBASIC-0.82□□□□□ -2.54
COL1A1P02452 RNU6-824P-201ENST00000363724 104 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 MIR216B-201ENST00000390186 82 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 RNA5SP292-201ENST00000390974 118 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 U3.27-201ENST00000391237 200 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 RNU6-630P-201ENST00000391258 106 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 RNU6-381P-201ENST00000391259 108 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 MTND3P22-201ENST00000510932 243 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 RNU6-976P-201ENST00000516086 111 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 RNU6-980P-201ENST00000516925 103 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.83□□□□□ -2.54
COL1A1P02452 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.83□□□□□ -2.54
COL1A1P02452 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 MTND4LP32-201ENST00000636111 270 ntBASIC-0.83□□□□□ -2.54
COL1A1P02452 SNORA25.1-201ENST00000362326 128 ntBASIC-0.84□□□□□ -2.54
COL1A1P02452 SNORA63.2-201ENST00000362603 126 ntBASIC-0.84□□□□□ -2.54
COL1A1P02452 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.84□□□□□ -2.54
COL1A1P02452 RNU1-115P-201ENST00000365329 160 ntBASIC-0.84□□□□□ -2.54
COL1A1P02452 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.84□□□□□ -2.54
COL1A1P02452 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.84□□□□□ -2.54
COL1A1P02452 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.84□□□□□ -2.54
COL1A1P02452 AC120024.2-201ENST00000576526 175 ntBASIC-0.84□□□□□ -2.54
COL1A1P02452 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.84□□□□□ -2.54
COL1A1P02452 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.85□□□□□ -2.55
COL1A1P02452 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.85□□□□□ -2.55
COL1A1P02452 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms