Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU6-287P-201ENST00000516230 98 ntBASIC-0.02□□□□□ -2.41
SSX4O60224 MIR5009-201ENST00000578736 100 ntBASIC-0.02□□□□□ -2.41
SSX4O60224 U6.100-201ENST00000636230 99 ntBASIC-0.02□□□□□ -2.41
SSX4O60224 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 RNU6-35P-201ENST00000384530 107 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 MIR181B2-201ENST00000385004 89 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 MIR892B-201ENST00000401279 77 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 MIR2113-201ENST00000459007 91 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 RNA5SP395-201ENST00000516567 118 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 MIR6759-201ENST00000638110 65 ntBASIC-0.03□□□□□ -2.41
SSX4O60224 RNU6-959P-201ENST00000384671 107 ntBASIC-0.04□□□□□ -2.42
SSX4O60224 MIR548M-201ENST00000408260 86 ntBASIC-0.04□□□□□ -2.42
SSX4O60224 AC109327.2-201ENST00000448339 378 ntBASIC-0.04□□□□□ -2.42
SSX4O60224 MIR3613-201ENST00000579844 87 ntBASIC-0.04□□□□□ -2.42
SSX4O60224 MIR4743-201ENST00000584576 69 ntBASIC-0.04□□□□□ -2.42
SSX4O60224 MIR3925-201ENST00000584674 77 ntBASIC-0.04□□□□□ -2.42
SSX4O60224 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.05□□□□□ -2.42
SSX4O60224 SNORA51.5-201ENST00000384126 131 ntBASIC-0.05□□□□□ -2.42
SSX4O60224 RNU6-466P-201ENST00000391224 103 ntBASIC-0.05□□□□□ -2.42
SSX4O60224 AC093423.1-201ENST00000440817 142 ntBASIC-0.05□□□□□ -2.42
SSX4O60224 AC141557.1-201ENST00000540982 400 ntBASIC-0.05□□□□□ -2.42
SSX4O60224 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
SSX4O60224 RNU6-86P-201ENST00000606534 107 ntBASIC-0.05□□□□□ -2.42
SSX4O60224 RNU6-161P-201ENST00000363051 106 ntBASIC-0.06□□□□□ -2.42
SSX4O60224 snoU13.11-201ENST00000459219 104 ntBASIC-0.06□□□□□ -2.42
SSX4O60224 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.06□□□□□ -2.42
SSX4O60224 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.07□□□□□ -2.42
SSX4O60224 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.07□□□□□ -2.42
SSX4O60224 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.07□□□□□ -2.42
SSX4O60224 SNORA25.13-201ENST00000516395 103 ntBASIC-0.07□□□□□ -2.42
SSX4O60224 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.07□□□□□ -2.42
SSX4O60224 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.07□□□□□ -2.42
SSX4O60224 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.07□□□□□ -2.42
SSX4O60224 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.07□□□□□ -2.42
SSX4O60224 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.08□□□□□ -2.42
SSX4O60224 RNU6-880P-201ENST00000384526 107 ntBASIC-0.08□□□□□ -2.42
SSX4O60224 MIR4460-201ENST00000577862 86 ntBASIC-0.08□□□□□ -2.42
SSX4O60224 AC069503.3-201ENST00000618674 145 ntBASIC-0.08□□□□□ -2.42
SSX4O60224 AC025521.1-201ENST00000621624 286 ntBASIC-0.08□□□□□ -2.42
SSX4O60224 SNORD45B-201ENST00000364617 72 ntBASIC-0.09□□□□□ -2.42
SSX4O60224 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.09□□□□□ -2.42
SSX4O60224 RNU6-81P-201ENST00000365608 104 ntBASIC-0.09□□□□□ -2.42
SSX4O60224 SNORD116-21-201ENST00000384507 92 ntBASIC-0.09□□□□□ -2.42
SSX4O60224 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SSX4O60224 SNORA75.1-201ENST00000391130 148 ntBASIC-0.09□□□□□ -2.42
SSX4O60224 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.09□□□□□ -2.42
SSX4O60224 YWHAEP2-201ENST00000580066 112 ntBASIC-0.09□□□□□ -2.42
SSX4O60224 MIR4473-201ENST00000583731 91 ntBASIC-0.09□□□□□ -2.42
SSX4O60224 AC084368.1-201ENST00000620935 65 ntBASIC-0.09□□□□□ -2.42
SSX4O60224 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.09□□□□□ -2.42
SSX4O60224 SNORD101-201ENST00000384027 73 ntBASIC-0.1□□□□□ -2.43
SSX4O60224 RNU6V-201ENST00000384105 107 ntBASIC-0.1□□□□□ -2.43
SSX4O60224 MIR516B1-201ENST00000385211 90 ntBASIC-0.1□□□□□ -2.43
SSX4O60224 RNA5SP163-201ENST00000410304 99 ntBASIC-0.1□□□□□ -2.43
SSX4O60224 AC008267.6-201ENST00000441664 139 ntBASIC-0.1□□□□□ -2.43
SSX4O60224 RNU7-159P-201ENST00000459284 62 ntBASIC-0.1□□□□□ -2.43
SSX4O60224 MIR4636-201ENST00000582271 80 ntBASIC-0.1□□□□□ -2.43
SSX4O60224 MIR4439-201ENST00000583746 80 ntBASIC-0.1□□□□□ -2.43
SSX4O60224 RNU6-664P-201ENST00000362381 107 ntBASIC-0.11□□□□□ -2.43
SSX4O60224 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.11□□□□□ -2.43
SSX4O60224 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.11□□□□□ -2.43
SSX4O60224 RNU6-412P-201ENST00000516434 106 ntBASIC-0.11□□□□□ -2.43
SSX4O60224 MIR4696-201ENST00000581431 70 ntBASIC-0.11□□□□□ -2.43
SSX4O60224 MIR4802-201ENST00000581881 80 ntBASIC-0.11□□□□□ -2.43
SSX4O60224 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.12□□□□□ -2.43
SSX4O60224 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.12□□□□□ -2.43
SSX4O60224 RNU6-929P-201ENST00000384429 107 ntBASIC-0.12□□□□□ -2.43
SSX4O60224 RNU7-165P-201ENST00000458864 60 ntBASIC-0.12□□□□□ -2.43
SSX4O60224 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.12□□□□□ -2.43
SSX4O60224 AL365222.1-201ENST00000614661 98 ntBASIC-0.12□□□□□ -2.43
SSX4O60224 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.12□□□□□ -2.43
SSX4O60224 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.13□□□□□ -2.43
SSX4O60224 RNU4-36P-201ENST00000364294 144 ntBASIC-0.13□□□□□ -2.43
SSX4O60224 RNU6-302P-201ENST00000365249 107 ntBASIC-0.13□□□□□ -2.43
SSX4O60224 RNU6-756P-201ENST00000383997 107 ntBASIC-0.13□□□□□ -2.43
SSX4O60224 MT-TY-201ENST00000387409 66 ntBASIC-0.13□□□□□ -2.43
SSX4O60224 MIR876-201ENST00000401147 81 ntBASIC-0.13□□□□□ -2.43
SSX4O60224 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.13□□□□□ -2.43
SSX4O60224 AL513043.2-201ENST00000573941 143 ntBASIC-0.13□□□□□ -2.43
SSX4O60224 MIR5589-201ENST00000579442 60 ntBASIC-0.13□□□□□ -2.43
SSX4O60224 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.13□□□□□ -2.43
SSX4O60224 RNU6-180P-201ENST00000516697 61 ntBASIC-0.14□□□□□ -2.43
SSX4O60224 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.14□□□□□ -2.43
SSX4O60224 uc_338.10-201ENST00000621872 182 ntBASIC-0.14□□□□□ -2.43
SSX4O60224 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.15□□□□□ -2.43
SSX4O60224 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.15□□□□□ -2.43
SSX4O60224 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.15□□□□□ -2.43
SSX4O60224 RNU6-75P-201ENST00000515944 104 ntBASIC-0.15□□□□□ -2.43
SSX4O60224 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.15□□□□□ -2.43
SSX4O60224 MIR6514-201ENST00000622549 70 ntBASIC-0.15□□□□□ -2.43
SSX4O60224 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.16□□□□□ -2.44
SSX4O60224 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.16□□□□□ -2.44
SSX4O60224 RNU6-813P-201ENST00000384691 107 ntBASIC-0.16□□□□□ -2.44
SSX4O60224 RNU6-65P-201ENST00000516332 98 ntBASIC-0.16□□□□□ -2.44
SSX4O60224 RNA5SP476-201ENST00000516613 103 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 217.6 ms