Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR1-1-201ENST00000362147 71 ntBASIC1.65□□□□□ -2.15
SOX1O00570 RNU6-369P-201ENST00000362515 102 ntBASIC1.65□□□□□ -2.15
SOX1O00570 RNA5SP245-201ENST00000364239 121 ntBASIC1.65□□□□□ -2.15
SOX1O00570 RNU1-119P-201ENST00000391122 165 ntBASIC1.65□□□□□ -2.15
SOX1O00570 RNU6-303P-201ENST00000517091 106 ntBASIC1.65□□□□□ -2.15
SOX1O00570 SNORA70.22-201ENST00000517160 124 ntBASIC1.65□□□□□ -2.15
SOX1O00570 SNORA31.24-201ENST00000517232 57 ntBASIC1.65□□□□□ -2.15
SOX1O00570 Y_RNA.788-201ENST00000622394 112 ntBASIC1.65□□□□□ -2.15
SOX1O00570 RNU5F-1-201ENST00000362507 117 ntBASIC1.64□□□□□ -2.15
SOX1O00570 MIR517C-201ENST00000385103 95 ntBASIC1.64□□□□□ -2.15
SOX1O00570 MIR100-201ENST00000385259 80 ntBASIC1.64□□□□□ -2.15
SOX1O00570 snoU13.17-201ENST00000458802 104 ntBASIC1.64□□□□□ -2.15
SOX1O00570 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SOX1O00570 Y_RNA.12-201ENST00000362393 112 ntBASIC1.63□□□□□ -2.15
SOX1O00570 RNU6-411P-201ENST00000384451 107 ntBASIC1.63□□□□□ -2.15
SOX1O00570 SNORD12-201ENST00000391002 90 ntBASIC1.63□□□□□ -2.15
SOX1O00570 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.63□□□□□ -2.15
SOX1O00570 AC244505.6-201ENST00000452829 130 ntBASIC1.63□□□□□ -2.15
SOX1O00570 RNU6-523P-201ENST00000516304 54 ntBASIC1.63□□□□□ -2.15
SOX1O00570 MIR3134-201ENST00000579433 74 ntBASIC1.63□□□□□ -2.15
SOX1O00570 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.63□□□□□ -2.15
SOX1O00570 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SOX1O00570 Y_RNA.207-201ENST00000364142 106 ntBASIC1.62□□□□□ -2.15
SOX1O00570 RNU6-1265P-201ENST00000516342 103 ntBASIC1.62□□□□□ -2.15
SOX1O00570 Y_RNA.532-201ENST00000384590 113 ntBASIC1.61□□□□□ -2.15
SOX1O00570 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.61□□□□□ -2.15
SOX1O00570 AC074348.1-201ENST00000426503 132 ntBASIC1.61□□□□□ -2.15
SOX1O00570 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.61□□□□□ -2.15
SOX1O00570 AC067940.1-201ENST00000458411 300 ntBASIC1.61□□□□□ -2.15
SOX1O00570 AC004223.1-201ENST00000479840 271 ntBASIC1.61□□□□□ -2.15
SOX1O00570 MIR216A-201ENST00000385063 110 ntBASIC1.6□□□□□ -2.15
SOX1O00570 RNU6-935P-201ENST00000410371 100 ntBASIC1.6□□□□□ -2.15
SOX1O00570 MIR4484-201ENST00000582855 83 ntBASIC1.6□□□□□ -2.15
SOX1O00570 MIR520F-201ENST00000384824 87 ntBASIC1.59□□□□□ -2.15
SOX1O00570 RNU6-788P-201ENST00000390967 104 ntBASIC1.59□□□□□ -2.15
SOX1O00570 RNU6-70P-201ENST00000516438 60 ntBASIC1.59□□□□□ -2.15
SOX1O00570 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.16
SOX1O00570 Y_RNA.174-201ENST00000363781 105 ntBASIC1.58□□□□□ -2.16
SOX1O00570 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
SOX1O00570 MIR1827-201ENST00000408549 66 ntBASIC1.58□□□□□ -2.16
SOX1O00570 HAR1A.1-201ENST00000459583 118 ntBASIC1.58□□□□□ -2.16
SOX1O00570 MIR3140-201ENST00000583685 90 ntBASIC1.58□□□□□ -2.16
SOX1O00570 AC012493.3-201ENST00000604494 112 ntBASIC1.58□□□□□ -2.16
SOX1O00570 SNORD115-44-201ENST00000365391 82 ntBASIC1.57□□□□□ -2.16
SOX1O00570 AC002429.1-201ENST00000437672 148 ntBASIC1.57□□□□□ -2.16
SOX1O00570 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.57□□□□□ -2.16
SOX1O00570 uc_338.16-201ENST00000621804 95 ntBASIC1.57□□□□□ -2.16
SOX1O00570 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SOX1O00570 RNA5SP457-201ENST00000363657 124 ntBASIC1.56□□□□□ -2.16
SOX1O00570 RNU6-681P-201ENST00000364012 104 ntBASIC1.56□□□□□ -2.16
SOX1O00570 AC114801.3-201ENST00000510231 177 ntBASIC1.56□□□□□ -2.16
SOX1O00570 RNU6-871P-201ENST00000516122 100 ntBASIC1.56□□□□□ -2.16
SOX1O00570 RNU6-287P-201ENST00000516230 98 ntBASIC1.56□□□□□ -2.16
SOX1O00570 SNORA31.14-201ENST00000516728 116 ntBASIC1.56□□□□□ -2.16
SOX1O00570 RNU6-1057P-201ENST00000517162 102 ntBASIC1.56□□□□□ -2.16
SOX1O00570 MIR5000-201ENST00000577717 103 ntBASIC1.56□□□□□ -2.16
SOX1O00570 RNU6-340P-201ENST00000364005 107 ntBASIC1.55□□□□□ -2.16
SOX1O00570 SNORD48-201ENST00000364953 64 ntBASIC1.55□□□□□ -2.16
SOX1O00570 Y_RNA.371-201ENST00000365591 113 ntBASIC1.55□□□□□ -2.16
SOX1O00570 MIR222-201ENST00000384992 110 ntBASIC1.55□□□□□ -2.16
SOX1O00570 MIR451A-201ENST00000385059 72 ntBASIC1.55□□□□□ -2.16
SOX1O00570 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.55□□□□□ -2.16
SOX1O00570 U3.27-201ENST00000391237 200 ntBASIC1.55□□□□□ -2.16
SOX1O00570 RNU2-59P-201ENST00000410482 191 ntBASIC1.55□□□□□ -2.16
SOX1O00570 AC097510.1-201ENST00000510945 133 ntBASIC1.55□□□□□ -2.16
SOX1O00570 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SOX1O00570 Y_RNA.606-201ENST00000410579 103 ntBASIC1.54□□□□□ -2.16
SOX1O00570 RNU6-1052P-201ENST00000411398 104 ntBASIC1.54□□□□□ -2.16
SOX1O00570 RNU6-719P-201ENST00000516671 104 ntBASIC1.54□□□□□ -2.16
SOX1O00570 RNU6-1015P-201ENST00000517121 99 ntBASIC1.54□□□□□ -2.16
SOX1O00570 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.54□□□□□ -2.16
SOX1O00570 Y_RNA.32-201ENST00000362589 110 ntBASIC1.53□□□□□ -2.16
SOX1O00570 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
SOX1O00570 Y_RNA.115-201ENST00000363272 98 ntBASIC1.52□□□□□ -2.17
SOX1O00570 SNORA8.1-201ENST00000384250 140 ntBASIC1.52□□□□□ -2.17
SOX1O00570 SNORA25-201ENST00000384384 134 ntBASIC1.52□□□□□ -2.17
SOX1O00570 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SOX1O00570 RNU7-13P-201ENST00000516413 62 ntBASIC1.52□□□□□ -2.17
SOX1O00570 RNU6-687P-201ENST00000516443 89 ntBASIC1.52□□□□□ -2.17
SOX1O00570 AL136317.1-201ENST00000612653 226 ntBASIC1.52□□□□□ -2.17
SOX1O00570 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SOX1O00570 SNORD115-24-201ENST00000363528 82 ntBASIC1.51□□□□□ -2.17
SOX1O00570 RNA5SP403-201ENST00000363598 108 ntBASIC1.51□□□□□ -2.17
SOX1O00570 SNORA24B-201ENST00000384176 131 ntBASIC1.51□□□□□ -2.17
SOX1O00570 MIR942-201ENST00000401111 86 ntBASIC1.51□□□□□ -2.17
SOX1O00570 RNU6-587P-201ENST00000391282 106 ntBASIC1.5□□□□□ -2.17
SOX1O00570 RNU6-1110P-201ENST00000516462 101 ntBASIC1.5□□□□□ -2.17
SOX1O00570 MIR3122-201ENST00000577243 73 ntBASIC1.5□□□□□ -2.17
SOX1O00570 RNA5SP327-201ENST00000362494 101 ntBASIC1.49□□□□□ -2.17
SOX1O00570 RNA5SP117-201ENST00000365294 118 ntBASIC1.49□□□□□ -2.17
SOX1O00570 RNU6-154P-201ENST00000384306 106 ntBASIC1.49□□□□□ -2.17
SOX1O00570 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
SOX1O00570 RNU6-634P-201ENST00000459134 106 ntBASIC1.49□□□□□ -2.17
SOX1O00570 MIR664A-201ENST00000626086 82 ntBASIC1.49□□□□□ -2.17
SOX1O00570 RNU6-590P-201ENST00000365039 107 ntBASIC1.48□□□□□ -2.17
SOX1O00570 MIR193B-201ENST00000384907 83 ntBASIC1.48□□□□□ -2.17
SOX1O00570 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SOX1O00570 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SOX1O00570 FABP5P4-201ENST00000437203 171 ntBASIC1.48□□□□□ -2.17
SOX1O00570 AC002350.1-201ENST00000490759 375 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms