Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNU6-480P-201ENST00000384332 107 ntBASIC-0.03□□□□□ -2.41
O00370 RNU6-35P-201ENST00000384530 107 ntBASIC-0.03□□□□□ -2.41
O00370 MIR519E-201ENST00000385075 84 ntBASIC-0.03□□□□□ -2.41
O00370 RNA5SP163-201ENST00000410304 99 ntBASIC-0.03□□□□□ -2.41
O00370 snoU13.11-201ENST00000459219 104 ntBASIC-0.03□□□□□ -2.41
O00370 RNU6-287P-201ENST00000516230 98 ntBASIC-0.03□□□□□ -2.41
O00370 RNA5SP395-201ENST00000516567 118 ntBASIC-0.03□□□□□ -2.41
O00370 AC141557.1-201ENST00000540982 400 ntBASIC-0.03□□□□□ -2.41
O00370 MIR4679-2-201ENST00000578358 77 ntBASIC-0.03□□□□□ -2.41
O00370 RNU6-86P-201ENST00000606534 107 ntBASIC-0.03□□□□□ -2.41
O00370 RNY3P2-201ENST00000362918 102 ntBASIC-0.04□□□□□ -2.42
O00370 RNU1-141P-201ENST00000364623 158 ntBASIC-0.04□□□□□ -2.42
O00370 SNORD50.2-201ENST00000365465 70 ntBASIC-0.04□□□□□ -2.42
O00370 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.04□□□□□ -2.42
O00370 MIR617-201ENST00000385030 97 ntBASIC-0.04□□□□□ -2.42
O00370 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.04□□□□□ -2.42
O00370 HMGN2P22-201ENST00000427588 175 ntBASIC-0.04□□□□□ -2.42
O00370 RNU6-782P-201ENST00000516852 104 ntBASIC-0.04□□□□□ -2.42
O00370 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.04□□□□□ -2.42
O00370 MIR4460-201ENST00000577862 86 ntBASIC-0.04□□□□□ -2.42
O00370 MIR5009-201ENST00000578736 100 ntBASIC-0.04□□□□□ -2.42
O00370 MIR548AD-201ENST00000584780 82 ntBASIC-0.04□□□□□ -2.42
O00370 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.04□□□□□ -2.42
O00370 AC084368.1-201ENST00000620935 65 ntBASIC-0.04□□□□□ -2.42
O00370 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.05□□□□□ -2.42
O00370 MIR516B1-201ENST00000385211 90 ntBASIC-0.05□□□□□ -2.42
O00370 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.05□□□□□ -2.42
O00370 YWHAEP2-201ENST00000580066 112 ntBASIC-0.05□□□□□ -2.42
O00370 AC025521.1-201ENST00000621624 286 ntBASIC-0.05□□□□□ -2.42
O00370 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.06□□□□□ -2.42
O00370 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.06□□□□□ -2.42
O00370 RNU6-929P-201ENST00000384429 107 ntBASIC-0.06□□□□□ -2.42
O00370 SNORD116-21-201ENST00000384507 92 ntBASIC-0.06□□□□□ -2.42
O00370 RNU6-880P-201ENST00000384526 107 ntBASIC-0.06□□□□□ -2.42
O00370 MIR106A-201ENST00000384870 81 ntBASIC-0.06□□□□□ -2.42
O00370 MIR892B-201ENST00000401279 77 ntBASIC-0.06□□□□□ -2.42
O00370 RNU7-159P-201ENST00000459284 62 ntBASIC-0.06□□□□□ -2.42
O00370 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.06□□□□□ -2.42
O00370 MIR371B-201ENST00000638082 66 ntBASIC-0.06□□□□□ -2.42
O00370 SNORD101-201ENST00000384027 73 ntBASIC-0.07□□□□□ -2.42
O00370 SNORA25.13-201ENST00000516395 103 ntBASIC-0.07□□□□□ -2.42
O00370 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.07□□□□□ -2.42
O00370 MIR6514-201ENST00000622549 70 ntBASIC-0.07□□□□□ -2.42
O00370 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.08□□□□□ -2.42
O00370 SNORD45B-201ENST00000364617 72 ntBASIC-0.08□□□□□ -2.42
O00370 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.08□□□□□ -2.42
O00370 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
O00370 SNORA75.1-201ENST00000391130 148 ntBASIC-0.08□□□□□ -2.42
O00370 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.08□□□□□ -2.42
O00370 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.08□□□□□ -2.42
O00370 MIR3613-201ENST00000579844 87 ntBASIC-0.08□□□□□ -2.42
O00370 MIR3925-201ENST00000584674 77 ntBASIC-0.08□□□□□ -2.42
O00370 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.09□□□□□ -2.42
O00370 RNU6-959P-201ENST00000384671 107 ntBASIC-0.09□□□□□ -2.42
O00370 MIR548H2-201ENST00000408874 88 ntBASIC-0.09□□□□□ -2.42
O00370 AC008267.6-201ENST00000441664 139 ntBASIC-0.09□□□□□ -2.42
O00370 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.09□□□□□ -2.42
O00370 MIR4802-201ENST00000581881 80 ntBASIC-0.09□□□□□ -2.42
O00370 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.09□□□□□ -2.42
O00370 RNU4-36P-201ENST00000364294 144 ntBASIC-0.1□□□□□ -2.43
O00370 RNU6-412P-201ENST00000516434 106 ntBASIC-0.1□□□□□ -2.43
O00370 RNA5SP476-201ENST00000516613 103 ntBASIC-0.1□□□□□ -2.43
O00370 MIR4636-201ENST00000582271 80 ntBASIC-0.1□□□□□ -2.43
O00370 AL365222.1-201ENST00000614661 98 ntBASIC-0.1□□□□□ -2.43
O00370 AC069503.3-201ENST00000618674 145 ntBASIC-0.1□□□□□ -2.43
O00370 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.11□□□□□ -2.43
O00370 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.11□□□□□ -2.43
O00370 RNU6-795P-201ENST00000516323 103 ntBASIC-0.11□□□□□ -2.43
O00370 RNU6-65P-201ENST00000516332 98 ntBASIC-0.11□□□□□ -2.43
O00370 RNU6-664P-201ENST00000362381 107 ntBASIC-0.12□□□□□ -2.43
O00370 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.12□□□□□ -2.43
O00370 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.12□□□□□ -2.43
O00370 AL513043.2-201ENST00000573941 143 ntBASIC-0.12□□□□□ -2.43
O00370 MIR4290-201ENST00000583807 95 ntBASIC-0.12□□□□□ -2.43
O00370 AC103810.7-201ENST00000607821 91 ntBASIC-0.12□□□□□ -2.43
O00370 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.13□□□□□ -2.43
O00370 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.13□□□□□ -2.43
O00370 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.13□□□□□ -2.43
O00370 RNU6V-201ENST00000384105 107 ntBASIC-0.13□□□□□ -2.43
O00370 SNORA19.1-201ENST00000410656 129 ntBASIC-0.13□□□□□ -2.43
O00370 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.13□□□□□ -2.43
O00370 RNU7-188P-201ENST00000517063 64 ntBASIC-0.13□□□□□ -2.43
O00370 MIR5589-201ENST00000579442 60 ntBASIC-0.13□□□□□ -2.43
O00370 MIR4696-201ENST00000581431 70 ntBASIC-0.13□□□□□ -2.43
O00370 MIR4536-1-201ENST00000583537 88 ntBASIC-0.13□□□□□ -2.43
O00370 MIR548Z-201ENST00000584743 97 ntBASIC-0.13□□□□□ -2.43
O00370 uc_338.10-201ENST00000621872 182 ntBASIC-0.13□□□□□ -2.43
O00370 AC093423.1-201ENST00000440817 142 ntBASIC-0.14□□□□□ -2.43
O00370 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.14□□□□□ -2.43
O00370 MIR548AE1-201ENST00000583292 70 ntBASIC-0.14□□□□□ -2.43
O00370 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.14□□□□□ -2.43
O00370 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.15□□□□□ -2.43
O00370 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.15□□□□□ -2.43
O00370 RNU6-154P-201ENST00000384306 106 ntBASIC-0.15□□□□□ -2.43
O00370 RNU6-476P-201ENST00000384726 107 ntBASIC-0.15□□□□□ -2.43
O00370 MIR451A-201ENST00000385059 72 ntBASIC-0.15□□□□□ -2.43
O00370 RNU6-935P-201ENST00000410371 100 ntBASIC-0.15□□□□□ -2.43
O00370 MIR4743-201ENST00000584576 69 ntBASIC-0.15□□□□□ -2.43
O00370 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.16□□□□□ -2.43
O00370 RNU6-756P-201ENST00000383997 107 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms