Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SNORA32.1-201ENST00000364514 115 ntBASIC-0.13□□□□□ -2.43
PCDHGA1Q9Y5H4 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.13□□□□□ -2.43
PCDHGA1Q9Y5H4 SNORA7.5-201ENST00000410672 110 ntBASIC-0.13□□□□□ -2.43
PCDHGA1Q9Y5H4 AC006210.1-201ENST00000424882 111 ntBASIC-0.13□□□□□ -2.43
PCDHGA1Q9Y5H4 NAMPTP3-201ENST00000569273 224 ntBASIC-0.13□□□□□ -2.43
PCDHGA1Q9Y5H4 SNORD114-31-201ENST00000363219 75 ntBASIC-0.14□□□□□ -2.43
PCDHGA1Q9Y5H4 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.14□□□□□ -2.43
PCDHGA1Q9Y5H4 RNA5SP484-201ENST00000458857 111 ntBASIC-0.14□□□□□ -2.43
PCDHGA1Q9Y5H4 AC104692.1-201ENST00000472406 90 ntBASIC-0.14□□□□□ -2.43
PCDHGA1Q9Y5H4 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.14□□□□□ -2.43
PCDHGA1Q9Y5H4 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.14□□□□□ -2.43
PCDHGA1Q9Y5H4 MIR3925-201ENST00000584674 77 ntBASIC-0.14□□□□□ -2.43
PCDHGA1Q9Y5H4 AL512310.12-203ENST00000640543 90 ntBASIC-0.14□□□□□ -2.43
PCDHGA1Q9Y5H4 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.15□□□□□ -2.43
PCDHGA1Q9Y5H4 RNY4P6-201ENST00000363667 96 ntBASIC-0.15□□□□□ -2.43
PCDHGA1Q9Y5H4 RNU6-929P-201ENST00000384429 107 ntBASIC-0.15□□□□□ -2.43
PCDHGA1Q9Y5H4 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.15□□□□□ -2.43
PCDHGA1Q9Y5H4 RNA5SP25-201ENST00000410815 110 ntBASIC-0.15□□□□□ -2.43
PCDHGA1Q9Y5H4 RNU7-165P-201ENST00000458864 60 ntBASIC-0.15□□□□□ -2.43
PCDHGA1Q9Y5H4 RNA5SP272-201ENST00000516095 111 ntBASIC-0.15□□□□□ -2.43
PCDHGA1Q9Y5H4 RNU6-426P-201ENST00000516464 97 ntBASIC-0.15□□□□□ -2.43
PCDHGA1Q9Y5H4 SNORD115-44-201ENST00000365391 82 ntBASIC-0.16□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-756P-201ENST00000383997 107 ntBASIC-0.16□□□□□ -2.44
PCDHGA1Q9Y5H4 HMGN2P22-201ENST00000427588 175 ntBASIC-0.16□□□□□ -2.44
PCDHGA1Q9Y5H4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.16□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-794P-201ENST00000517261 64 ntBASIC-0.16□□□□□ -2.44
PCDHGA1Q9Y5H4 SNORD38.1-201ENST00000363863 68 ntBASIC-0.17□□□□□ -2.44
PCDHGA1Q9Y5H4 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.17□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.17□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU7-159P-201ENST00000459284 62 ntBASIC-0.17□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-180P-201ENST00000516697 61 ntBASIC-0.17□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-90P-201ENST00000606352 106 ntBASIC-0.17□□□□□ -2.44
PCDHGA1Q9Y5H4 AC025166.1-201ENST00000612411 163 ntBASIC-0.17□□□□□ -2.44
PCDHGA1Q9Y5H4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.17□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-235P-201ENST00000362644 107 ntBASIC-0.18□□□□□ -2.44
PCDHGA1Q9Y5H4 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.18□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU1-141P-201ENST00000364623 158 ntBASIC-0.18□□□□□ -2.44
PCDHGA1Q9Y5H4 SNORD58C-201ENST00000365223 64 ntBASIC-0.18□□□□□ -2.44
PCDHGA1Q9Y5H4 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.18□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-409P-201ENST00000384114 104 ntBASIC-0.18□□□□□ -2.44
PCDHGA1Q9Y5H4 AL353813.1-201ENST00000440700 253 ntBASIC-0.18□□□□□ -2.44
PCDHGA1Q9Y5H4 SPINT5P-201ENST00000448174 155 ntBASIC-0.18□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU7-200P-201ENST00000516105 62 ntBASIC-0.18□□□□□ -2.44
PCDHGA1Q9Y5H4 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.18□□□□□ -2.44
PCDHGA1Q9Y5H4 MTND5P18-201ENST00000445624 1801 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 SNORD36A-201ENST00000362874 73 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 MIR617-201ENST00000385030 97 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 SNORA75.1-201ENST00000391130 148 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-243P-201ENST00000391140 107 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 MIR548G-201ENST00000408442 89 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 RNA5SP163-201ENST00000410304 99 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 MTND4LP9-201ENST00000427694 174 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-758P-201ENST00000516292 89 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 SNORA25.13-201ENST00000516395 103 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 MIR548AG2-201ENST00000581228 64 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 AC090425.1-201ENST00000610007 140 ntBASIC-0.19□□□□□ -2.44
PCDHGA1Q9Y5H4 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.2□□□□□ -2.44
PCDHGA1Q9Y5H4 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.2□□□□□ -2.44
PCDHGA1Q9Y5H4 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.2□□□□□ -2.44
PCDHGA1Q9Y5H4 MIR519E-201ENST00000385075 84 ntBASIC-0.2□□□□□ -2.44
PCDHGA1Q9Y5H4 MIR214-201ENST00000385214 110 ntBASIC-0.2□□□□□ -2.44
PCDHGA1Q9Y5H4 AC093423.1-201ENST00000440817 142 ntBASIC-0.2□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.2□□□□□ -2.44
PCDHGA1Q9Y5H4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.2□□□□□ -2.44
PCDHGA1Q9Y5H4 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.21□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.21□□□□□ -2.44
PCDHGA1Q9Y5H4 snoU13.19-201ENST00000459148 104 ntBASIC-0.21□□□□□ -2.44
PCDHGA1Q9Y5H4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.21□□□□□ -2.44
PCDHGA1Q9Y5H4 MIR4493-201ENST00000584016 73 ntBASIC-0.21□□□□□ -2.44
PCDHGA1Q9Y5H4 AP001180.6-201ENST00000584918 159 ntBASIC-0.21□□□□□ -2.44
PCDHGA1Q9Y5H4 AC084368.1-201ENST00000620935 65 ntBASIC-0.21□□□□□ -2.44
PCDHGA1Q9Y5H4 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.22□□□□□ -2.44
PCDHGA1Q9Y5H4 SNORA40-201ENST00000388090 126 ntBASIC-0.22□□□□□ -2.44
PCDHGA1Q9Y5H4 MIR876-201ENST00000401147 81 ntBASIC-0.22□□□□□ -2.44
PCDHGA1Q9Y5H4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.22□□□□□ -2.44
PCDHGA1Q9Y5H4 MIR4645-201ENST00000583158 77 ntBASIC-0.22□□□□□ -2.44
PCDHGA1Q9Y5H4 TRDV1-202ENST00000621643 102 ntBASIC-0.22□□□□□ -2.44
PCDHGA1Q9Y5H4 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.23□□□□□ -2.45
PCDHGA1Q9Y5H4 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.23□□□□□ -2.45
PCDHGA1Q9Y5H4 MIR2113-201ENST00000459007 91 ntBASIC-0.23□□□□□ -2.45
PCDHGA1Q9Y5H4 RNU6-287P-201ENST00000516230 98 ntBASIC-0.23□□□□□ -2.45
PCDHGA1Q9Y5H4 CR383656.4-201ENST00000546909 122 ntBASIC-0.23□□□□□ -2.45
PCDHGA1Q9Y5H4 AL442128.1-201ENST00000615151 90 ntBASIC-0.23□□□□□ -2.45
PCDHGA1Q9Y5H4 AC069503.3-201ENST00000618674 145 ntBASIC-0.23□□□□□ -2.45
PCDHGA1Q9Y5H4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.24□□□□□ -2.45
PCDHGA1Q9Y5H4 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.24□□□□□ -2.45
PCDHGA1Q9Y5H4 MIR516B1-201ENST00000385211 90 ntBASIC-0.24□□□□□ -2.45
PCDHGA1Q9Y5H4 RNU6-816P-201ENST00000390914 107 ntBASIC-0.24□□□□□ -2.45
PCDHGA1Q9Y5H4 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.24□□□□□ -2.45
PCDHGA1Q9Y5H4 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.24□□□□□ -2.45
PCDHGA1Q9Y5H4 AL162726.3-218ENST00000636401 95 ntBASIC-0.24□□□□□ -2.45
PCDHGA1Q9Y5H4 SNORD114-15-201ENST00000364687 72 ntBASIC-0.25□□□□□ -2.45
PCDHGA1Q9Y5H4 RNU6-257P-201ENST00000410238 98 ntBASIC-0.25□□□□□ -2.45
PCDHGA1Q9Y5H4 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.25□□□□□ -2.45
PCDHGA1Q9Y5H4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.25□□□□□ -2.45
PCDHGA1Q9Y5H4 MIR6514-201ENST00000622549 70 ntBASIC-0.25□□□□□ -2.45
PCDHGA1Q9Y5H4 RNY1P5-201ENST00000383890 115 ntBASIC-0.26□□□□□ -2.45
PCDHGA1Q9Y5H4 MIR106A-201ENST00000384870 81 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 217.6 ms