Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC079140.2-201ENST00000506193 142 ntBASIC2.26□□□□□ -2.05
PCDHB3Q9Y5E6 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
PCDHB3Q9Y5E6 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
PCDHB3Q9Y5E6 AC106800.4-201ENST00000614905 153 ntBASIC2.26□□□□□ -2.05
PCDHB3Q9Y5E6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.26□□□□□ -2.05
PCDHB3Q9Y5E6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.25□□□□□ -2.05
PCDHB3Q9Y5E6 AC048334.1-201ENST00000477975 159 ntBASIC2.25□□□□□ -2.05
PCDHB3Q9Y5E6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PCDHB3Q9Y5E6 RNU6-940P-201ENST00000363433 104 ntBASIC2.24□□□□□ -2.05
PCDHB3Q9Y5E6 RNA5SP403-201ENST00000363598 108 ntBASIC2.24□□□□□ -2.05
PCDHB3Q9Y5E6 RNU6-645P-201ENST00000364649 106 ntBASIC2.24□□□□□ -2.05
PCDHB3Q9Y5E6 RNU6-1065P-201ENST00000384513 106 ntBASIC2.24□□□□□ -2.05
PCDHB3Q9Y5E6 SCARNA21.1-201ENST00000515996 128 ntBASIC2.24□□□□□ -2.05
PCDHB3Q9Y5E6 AC023827.1-201ENST00000569247 97 ntBASIC2.24□□□□□ -2.05
PCDHB3Q9Y5E6 MIR5007-201ENST00000583098 95 ntBASIC2.24□□□□□ -2.05
PCDHB3Q9Y5E6 MIR4769-201ENST00000584126 77 ntBASIC2.24□□□□□ -2.05
PCDHB3Q9Y5E6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHB3Q9Y5E6 MIRLET7G-201ENST00000362280 84 ntBASIC2.23□□□□□ -2.05
PCDHB3Q9Y5E6 HMGN2P23-201ENST00000456759 269 ntBASIC2.23□□□□□ -2.05
PCDHB3Q9Y5E6 MIR3937-201ENST00000580135 106 ntBASIC2.23□□□□□ -2.05
PCDHB3Q9Y5E6 MIR3657-201ENST00000584818 117 ntBASIC2.23□□□□□ -2.05
PCDHB3Q9Y5E6 MIR548O2-201ENST00000616090 70 ntBASIC2.23□□□□□ -2.05
PCDHB3Q9Y5E6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.23□□□□□ -2.05
PCDHB3Q9Y5E6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCDHB3Q9Y5E6 RNU6-369P-201ENST00000362515 102 ntBASIC2.22□□□□□ -2.05
PCDHB3Q9Y5E6 Y_RNA.32-201ENST00000362589 110 ntBASIC2.22□□□□□ -2.05
PCDHB3Q9Y5E6 SNORD115-24-201ENST00000363528 82 ntBASIC2.22□□□□□ -2.05
PCDHB3Q9Y5E6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PCDHB3Q9Y5E6 MIR4804-201ENST00000581683 73 ntBASIC2.22□□□□□ -2.05
PCDHB3Q9Y5E6 SNORD33-201ENST00000362761 85 ntBASIC2.21□□□□□ -2.06
PCDHB3Q9Y5E6 RNU6-54P-201ENST00000365563 107 ntBASIC2.21□□□□□ -2.06
PCDHB3Q9Y5E6 MIR617-201ENST00000385030 97 ntBASIC2.21□□□□□ -2.06
PCDHB3Q9Y5E6 snoU13.23-201ENST00000458863 104 ntBASIC2.21□□□□□ -2.06
PCDHB3Q9Y5E6 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
PCDHB3Q9Y5E6 SNORA31.14-201ENST00000516728 116 ntBASIC2.21□□□□□ -2.06
PCDHB3Q9Y5E6 RNU7-161P-201ENST00000517289 62 ntBASIC2.21□□□□□ -2.06
PCDHB3Q9Y5E6 AL512310.8-201ENST00000550183 120 ntBASIC2.21□□□□□ -2.06
PCDHB3Q9Y5E6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PCDHB3Q9Y5E6 RNU6-446P-201ENST00000362827 106 ntBASIC2.2□□□□□ -2.06
PCDHB3Q9Y5E6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PCDHB3Q9Y5E6 MIR4299-201ENST00000577899 72 ntBASIC2.2□□□□□ -2.06
PCDHB3Q9Y5E6 uc_338.16-201ENST00000621804 95 ntBASIC2.2□□□□□ -2.06
PCDHB3Q9Y5E6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PCDHB3Q9Y5E6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PCDHB3Q9Y5E6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHB3Q9Y5E6 RNU6-1335P-201ENST00000365426 107 ntBASIC2.19□□□□□ -2.06
PCDHB3Q9Y5E6 Y_RNA.363-201ENST00000365529 113 ntBASIC2.19□□□□□ -2.06
PCDHB3Q9Y5E6 RNA5SP299-201ENST00000391203 116 ntBASIC2.19□□□□□ -2.06
PCDHB3Q9Y5E6 AC108210.2-201ENST00000503681 201 ntBASIC2.19□□□□□ -2.06
PCDHB3Q9Y5E6 MIR7978-201ENST00000636158 59 ntBASIC2.19□□□□□ -2.06
PCDHB3Q9Y5E6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PCDHB3Q9Y5E6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PCDHB3Q9Y5E6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PCDHB3Q9Y5E6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PCDHB3Q9Y5E6 MIR519E-201ENST00000385075 84 ntBASIC2.18□□□□□ -2.06
PCDHB3Q9Y5E6 RNU7-56P-201ENST00000458744 62 ntBASIC2.18□□□□□ -2.06
PCDHB3Q9Y5E6 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
PCDHB3Q9Y5E6 SNORA31.2-201ENST00000516019 134 ntBASIC2.18□□□□□ -2.06
PCDHB3Q9Y5E6 Y_RNA.722-201ENST00000517279 114 ntBASIC2.18□□□□□ -2.06
PCDHB3Q9Y5E6 AL096840.1-201ENST00000603287 93 ntBASIC2.18□□□□□ -2.06
PCDHB3Q9Y5E6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHB3Q9Y5E6 SNORD114-1-201ENST00000362705 72 ntBASIC2.17□□□□□ -2.06
PCDHB3Q9Y5E6 RNU6-260P-201ENST00000384092 107 ntBASIC2.17□□□□□ -2.06
PCDHB3Q9Y5E6 MIR7-2-201ENST00000384970 110 ntBASIC2.17□□□□□ -2.06
PCDHB3Q9Y5E6 MIR30A-201ENST00000385092 71 ntBASIC2.17□□□□□ -2.06
PCDHB3Q9Y5E6 RNU1-119P-201ENST00000391122 165 ntBASIC2.17□□□□□ -2.06
PCDHB3Q9Y5E6 AC067940.1-201ENST00000458411 300 ntBASIC2.17□□□□□ -2.06
PCDHB3Q9Y5E6 RNU7-104P-201ENST00000459398 79 ntBASIC2.17□□□□□ -2.06
PCDHB3Q9Y5E6 AC015712.3-201ENST00000559380 164 ntBASIC2.17□□□□□ -2.06
PCDHB3Q9Y5E6 MIR6766-201ENST00000622641 72 ntBASIC2.17□□□□□ -2.06
PCDHB3Q9Y5E6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHB3Q9Y5E6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHB3Q9Y5E6 Y_RNA.174-201ENST00000363781 105 ntBASIC2.16□□□□□ -2.06
PCDHB3Q9Y5E6 AL591806.2-201ENST00000433122 173 ntBASIC2.16□□□□□ -2.06
PCDHB3Q9Y5E6 SNORD42B-201ENST00000458893 67 ntBASIC2.16□□□□□ -2.06
PCDHB3Q9Y5E6 SNORA44.1-201ENST00000517031 108 ntBASIC2.16□□□□□ -2.06
PCDHB3Q9Y5E6 AL157834.3-201ENST00000615543 103 ntBASIC2.16□□□□□ -2.06
PCDHB3Q9Y5E6 RNA5SP37-201ENST00000365420 130 ntBASIC2.15□□□□□ -2.07
PCDHB3Q9Y5E6 AL359821.1-201ENST00000605519 182 ntBASIC2.15□□□□□ -2.07
PCDHB3Q9Y5E6 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
PCDHB3Q9Y5E6 RNA5SP215-201ENST00000363440 122 ntBASIC2.14□□□□□ -2.07
PCDHB3Q9Y5E6 RNU6-482P-201ENST00000391068 107 ntBASIC2.14□□□□□ -2.07
PCDHB3Q9Y5E6 MIR1289-2-201ENST00000408360 111 ntBASIC2.14□□□□□ -2.07
PCDHB3Q9Y5E6 RNU6-994P-201ENST00000410507 111 ntBASIC2.14□□□□□ -2.07
PCDHB3Q9Y5E6 AL591704.2-201ENST00000421658 181 ntBASIC2.14□□□□□ -2.07
PCDHB3Q9Y5E6 HMGN2P19-201ENST00000425149 265 ntBASIC2.14□□□□□ -2.07
PCDHB3Q9Y5E6 RNU7-21P-201ENST00000459430 62 ntBASIC2.14□□□□□ -2.07
PCDHB3Q9Y5E6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.14□□□□□ -2.07
PCDHB3Q9Y5E6 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
PCDHB3Q9Y5E6 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
PCDHB3Q9Y5E6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHB3Q9Y5E6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PCDHB3Q9Y5E6 SNORA2.1-201ENST00000363089 137 ntBASIC2.13□□□□□ -2.07
PCDHB3Q9Y5E6 RNU6V-201ENST00000384105 107 ntBASIC2.13□□□□□ -2.07
PCDHB3Q9Y5E6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PCDHB3Q9Y5E6 MIR934-201ENST00000401241 83 ntBASIC2.13□□□□□ -2.07
PCDHB3Q9Y5E6 RNU1-123P-201ENST00000458950 160 ntBASIC2.13□□□□□ -2.07
PCDHB3Q9Y5E6 RNU6-656P-201ENST00000516785 107 ntBASIC2.13□□□□□ -2.07
PCDHB3Q9Y5E6 RN7SKP88-201ENST00000516847 250 ntBASIC2.13□□□□□ -2.07
PCDHB3Q9Y5E6 SNORA40.17-201ENST00000517256 115 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms