Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MT-TN-201ENST00000387400 73 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 RNU6-630P-201ENST00000391258 106 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 RNA5SP100-201ENST00000410903 110 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 RNA5SP59-201ENST00000410922 110 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 PRELID3BP2-201ENST00000605362 201 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
NOTCH3Q9UM47 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
NOTCH3Q9UM47 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.03□□□□□ -2.25
NOTCH3Q9UM47 SNORD93-201ENST00000408813 74 ntBASIC1.03□□□□□ -2.25
NOTCH3Q9UM47 Z96811.1-201ENST00000445880 108 ntBASIC1.03□□□□□ -2.25
NOTCH3Q9UM47 RNU1-92P-201ENST00000517017 135 ntBASIC1.03□□□□□ -2.25
NOTCH3Q9UM47 MIR6078-201ENST00000611069 100 ntBASIC1.03□□□□□ -2.25
NOTCH3Q9UM47 RNU6-531P-201ENST00000516694 104 ntBASIC1.02□□□□□ -2.25
NOTCH3Q9UM47 RNA5SP330-201ENST00000517096 96 ntBASIC1.02□□□□□ -2.25
NOTCH3Q9UM47 SNORA31.25-201ENST00000517242 134 ntBASIC1.02□□□□□ -2.25
NOTCH3Q9UM47 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.02□□□□□ -2.25
NOTCH3Q9UM47 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.02□□□□□ -2.25
NOTCH3Q9UM47 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 MIR30D-201ENST00000362283 70 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 Y_RNA.42-201ENST00000362660 108 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 RNU6-540P-201ENST00000384622 101 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 RNU6-1165P-201ENST00000410119 107 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 SNORD63B-201ENST00000411005 70 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 FGF7P7-201ENST00000514120 227 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 SNORA31.24-201ENST00000517232 57 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 MIR4529-201ENST00000578110 78 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 MIR548H5-201ENST00000580314 60 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 MIR377-201ENST00000362145 69 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 RNU6-940P-201ENST00000363433 104 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 MIR4511-201ENST00000582784 87 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 MIR4658-201ENST00000584344 65 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 MIR6840-201ENST00000611937 71 ntBASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
NOTCH3Q9UM47 MIR101-2-201ENST00000362195 79 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 RNU6-535P-201ENST00000384722 107 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 MIR222-201ENST00000384992 110 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1□□□□□ -2.25
NOTCH3Q9UM47 MIR3192-201ENST00000584920 77 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 RNU7-10P-201ENST00000607194 63 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 U6.111-201ENST00000636093 83 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 RNA5SP259-201ENST00000365541 109 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 SNORD101-201ENST00000384027 73 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 RNU6-364P-201ENST00000384387 107 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 AC110620.1-201ENST00000416042 228 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 MIR18B-201ENST00000454574 71 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 RNU7-185P-201ENST00000459215 60 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 RNU6-322P-201ENST00000516010 103 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 SNORA25.16-201ENST00000516741 121 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 RNU6-922P-201ENST00000516753 99 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 MIR4696-201ENST00000581431 70 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 AP000648.3-201ENST00000623539 4507 ntBASIC1□□□□□ -2.25
NOTCH3Q9UM47 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 RNU6-330P-201ENST00000363015 107 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 Y_RNA.588-201ENST00000391254 102 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 RNU7-106P-201ENST00000459514 67 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 AC097510.1-201ENST00000510945 133 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 Y_RNA.697-201ENST00000516776 113 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 SNORD114-27-201ENST00000363766 70 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 RNU6-154P-201ENST00000384306 106 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 SNORA48.1-201ENST00000390879 135 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 UBBP3-201ENST00000445497 241 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 RNU7-195P-201ENST00000458793 62 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 RNU6-542P-201ENST00000516405 103 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 RNU2-19P-201ENST00000517288 84 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 MIR3140-201ENST00000583685 90 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 AC104996.3-201ENST00000590718 94 ntBASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
NOTCH3Q9UM47 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 RNU6-141P-201ENST00000410499 105 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 Y_RNA.606-201ENST00000410579 103 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 MIR1468-201ENST00000410600 86 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 AC097635.1-201ENST00000450678 155 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 RNU6-947P-201ENST00000516264 106 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 AL161722.3-201ENST00000605789 2983 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 MIR409-201ENST00000362237 79 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 RNU6-403P-201ENST00000363163 104 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 RNU6-30P-201ENST00000384561 107 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 MIR451A-201ENST00000385059 72 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 SNORA40.6-201ENST00000391153 128 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 SNORD23.1-201ENST00000408212 104 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 RNU7-156P-201ENST00000517214 74 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 MIR3660-201ENST00000584845 100 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 MIR924-201ENST00000638017 53 ntBASIC0.98□□□□□ -2.25
NOTCH3Q9UM47 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 SNORA16B-201ENST00000364674 135 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 RNU6-580P-201ENST00000365159 107 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 RNA5SP95-201ENST00000410319 137 ntBASIC0.97□□□□□ -2.25
NOTCH3Q9UM47 RNU6-935P-201ENST00000410371 100 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 297.2 ms