Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC006210.1-201ENST00000424882 111 ntBASIC0□□□□□ -2.41
CHMP1AQ9HD42 AL161932.1-201ENST00000437408 146 ntBASIC0□□□□□ -2.41
CHMP1AQ9HD42 RNA5SP436-201ENST00000516020 115 ntBASIC0□□□□□ -2.41
CHMP1AQ9HD42 SNORD33.1-201ENST00000516213 88 ntBASIC0□□□□□ -2.41
CHMP1AQ9HD42 U7.6-201ENST00000610841 64 ntBASIC0□□□□□ -2.41
CHMP1AQ9HD42 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
CHMP1AQ9HD42 SNORD114-23-201ENST00000363536 72 ntBASIC-0.01□□□□□ -2.41
CHMP1AQ9HD42 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.01□□□□□ -2.41
CHMP1AQ9HD42 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.01□□□□□ -2.41
CHMP1AQ9HD42 HMGN2P22-201ENST00000427588 175 ntBASIC-0.01□□□□□ -2.41
CHMP1AQ9HD42 MIR4677-201ENST00000584153 80 ntBASIC-0.01□□□□□ -2.41
CHMP1AQ9HD42 TRDV1-202ENST00000621643 102 ntBASIC-0.01□□□□□ -2.41
CHMP1AQ9HD42 RNU6-161P-201ENST00000363051 106 ntBASIC-0.02□□□□□ -2.41
CHMP1AQ9HD42 RNU6-704P-201ENST00000364162 103 ntBASIC-0.02□□□□□ -2.41
CHMP1AQ9HD42 SNORD115-44-201ENST00000365391 82 ntBASIC-0.02□□□□□ -2.41
CHMP1AQ9HD42 MIR593-201ENST00000384856 100 ntBASIC-0.02□□□□□ -2.41
CHMP1AQ9HD42 MIR548A1-201ENST00000385041 97 ntBASIC-0.02□□□□□ -2.41
CHMP1AQ9HD42 MIR519E-201ENST00000385075 84 ntBASIC-0.02□□□□□ -2.41
CHMP1AQ9HD42 RNU7-74P-201ENST00000459104 62 ntBASIC-0.02□□□□□ -2.41
CHMP1AQ9HD42 RNU1-141P-201ENST00000364623 158 ntBASIC-0.03□□□□□ -2.41
CHMP1AQ9HD42 RNU6-652P-201ENST00000365488 107 ntBASIC-0.03□□□□□ -2.41
CHMP1AQ9HD42 MIR145-201ENST00000384967 88 ntBASIC-0.03□□□□□ -2.41
CHMP1AQ9HD42 MIR617-201ENST00000385030 97 ntBASIC-0.03□□□□□ -2.41
CHMP1AQ9HD42 AC068339.1-201ENST00000526965 141 ntBASIC-0.03□□□□□ -2.41
CHMP1AQ9HD42 MIR4694-201ENST00000578534 80 ntBASIC-0.03□□□□□ -2.41
CHMP1AQ9HD42 MIR4514-201ENST00000581410 57 ntBASIC-0.03□□□□□ -2.41
CHMP1AQ9HD42 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
CHMP1AQ9HD42 MIR3925-201ENST00000584674 77 ntBASIC-0.03□□□□□ -2.41
CHMP1AQ9HD42 U6.95-201ENST00000636931 70 ntBASIC-0.03□□□□□ -2.41
CHMP1AQ9HD42 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.04□□□□□ -2.42
CHMP1AQ9HD42 RNU6-957P-201ENST00000363652 99 ntBASIC-0.04□□□□□ -2.42
CHMP1AQ9HD42 AC093423.1-201ENST00000440817 142 ntBASIC-0.04□□□□□ -2.42
CHMP1AQ9HD42 RNU6-287P-201ENST00000516230 98 ntBASIC-0.04□□□□□ -2.42
CHMP1AQ9HD42 U6.100-201ENST00000636230 99 ntBASIC-0.04□□□□□ -2.42
CHMP1AQ9HD42 SNORD116-14-201ENST00000383894 92 ntBASIC-0.05□□□□□ -2.42
CHMP1AQ9HD42 SNORD116-17-201ENST00000383929 92 ntBASIC-0.05□□□□□ -2.42
CHMP1AQ9HD42 SNORD116-15-201ENST00000384445 92 ntBASIC-0.05□□□□□ -2.42
CHMP1AQ9HD42 SNORD116-19-201ENST00000384729 92 ntBASIC-0.05□□□□□ -2.42
CHMP1AQ9HD42 MIR2113-201ENST00000459007 91 ntBASIC-0.05□□□□□ -2.42
CHMP1AQ9HD42 MIR4743-201ENST00000584576 69 ntBASIC-0.05□□□□□ -2.42
CHMP1AQ9HD42 AC096720.1-201ENST00000604441 183 ntBASIC-0.05□□□□□ -2.42
CHMP1AQ9HD42 RNY3P2-201ENST00000362918 102 ntBASIC-0.06□□□□□ -2.42
CHMP1AQ9HD42 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.06□□□□□ -2.42
CHMP1AQ9HD42 RNU6-832P-201ENST00000363319 107 ntBASIC-0.06□□□□□ -2.42
CHMP1AQ9HD42 U8.6-201ENST00000364939 135 ntBASIC-0.06□□□□□ -2.42
CHMP1AQ9HD42 MIR548A3-201ENST00000385297 97 ntBASIC-0.06□□□□□ -2.42
CHMP1AQ9HD42 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.06□□□□□ -2.42
CHMP1AQ9HD42 MIR4667-201ENST00000578933 66 ntBASIC-0.06□□□□□ -2.42
CHMP1AQ9HD42 MIR3613-201ENST00000579844 87 ntBASIC-0.06□□□□□ -2.42
CHMP1AQ9HD42 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.06□□□□□ -2.42
CHMP1AQ9HD42 AC022709.1-201ENST00000615967 87 ntBASIC-0.06□□□□□ -2.42
CHMP1AQ9HD42 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.07□□□□□ -2.42
CHMP1AQ9HD42 SNORA51.5-201ENST00000384126 131 ntBASIC-0.07□□□□□ -2.42
CHMP1AQ9HD42 MIR181B2-201ENST00000385004 89 ntBASIC-0.07□□□□□ -2.42
CHMP1AQ9HD42 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.07□□□□□ -2.42
CHMP1AQ9HD42 SNORA62.5-201ENST00000516634 120 ntBASIC-0.07□□□□□ -2.42
CHMP1AQ9HD42 MIR6515-201ENST00000619843 57 ntBASIC-0.07□□□□□ -2.42
CHMP1AQ9HD42 SNORD114-16-201ENST00000363044 70 ntBASIC-0.08□□□□□ -2.42
CHMP1AQ9HD42 MIR892B-201ENST00000401279 77 ntBASIC-0.08□□□□□ -2.42
CHMP1AQ9HD42 SNORA25.13-201ENST00000516395 103 ntBASIC-0.08□□□□□ -2.42
CHMP1AQ9HD42 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.08□□□□□ -2.42
CHMP1AQ9HD42 AC141557.1-201ENST00000540982 400 ntBASIC-0.08□□□□□ -2.42
CHMP1AQ9HD42 MIR5009-201ENST00000578736 100 ntBASIC-0.08□□□□□ -2.42
CHMP1AQ9HD42 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 RNU6-480P-201ENST00000384332 107 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 AC109327.2-201ENST00000448339 378 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 snoU13.11-201ENST00000459219 104 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 AL670379.3-201ENST00000605040 251 ntBASIC-0.09□□□□□ -2.42
CHMP1AQ9HD42 SNORD114-26-201ENST00000363543 72 ntBASIC-0.1□□□□□ -2.43
CHMP1AQ9HD42 RNU6-756P-201ENST00000383997 107 ntBASIC-0.1□□□□□ -2.43
CHMP1AQ9HD42 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
CHMP1AQ9HD42 MIR1287-201ENST00000408492 90 ntBASIC-0.1□□□□□ -2.43
CHMP1AQ9HD42 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.1□□□□□ -2.43
CHMP1AQ9HD42 RNU6-86P-201ENST00000606534 107 ntBASIC-0.1□□□□□ -2.43
CHMP1AQ9HD42 AC069503.3-201ENST00000618674 145 ntBASIC-0.1□□□□□ -2.43
CHMP1AQ9HD42 AC010487.4-201ENST00000637027 61 ntBASIC-0.1□□□□□ -2.43
CHMP1AQ9HD42 RNU6-466P-201ENST00000391224 103 ntBASIC-0.11□□□□□ -2.43
CHMP1AQ9HD42 RNA5SP163-201ENST00000410304 99 ntBASIC-0.11□□□□□ -2.43
CHMP1AQ9HD42 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.11□□□□□ -2.43
CHMP1AQ9HD42 AC023932.2-201ENST00000603176 175 ntBASIC-0.11□□□□□ -2.43
CHMP1AQ9HD42 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.11□□□□□ -2.43
CHMP1AQ9HD42 MIR6718-201ENST00000616153 80 ntBASIC-0.11□□□□□ -2.43
CHMP1AQ9HD42 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.12□□□□□ -2.43
CHMP1AQ9HD42 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.12□□□□□ -2.43
CHMP1AQ9HD42 RNU6-959P-201ENST00000384671 107 ntBASIC-0.12□□□□□ -2.43
CHMP1AQ9HD42 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.12□□□□□ -2.43
CHMP1AQ9HD42 MIR876-201ENST00000401147 81 ntBASIC-0.12□□□□□ -2.43
CHMP1AQ9HD42 RNU7-165P-201ENST00000458864 60 ntBASIC-0.12□□□□□ -2.43
CHMP1AQ9HD42 MIR4473-201ENST00000583731 91 ntBASIC-0.12□□□□□ -2.43
CHMP1AQ9HD42 MIR4768-201ENST00000585270 74 ntBASIC-0.12□□□□□ -2.43
CHMP1AQ9HD42 AC025521.1-201ENST00000621624 286 ntBASIC-0.12□□□□□ -2.43
CHMP1AQ9HD42 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.12□□□□□ -2.43
CHMP1AQ9HD42 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.13□□□□□ -2.43
CHMP1AQ9HD42 RNU6-929P-201ENST00000384429 107 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms