Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNY1P8-201ENST00000383970 114 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 MIR548L-201ENST00000408303 86 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 RNU6-887P-201ENST00000410660 100 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 AL606490.4-201ENST00000423117 127 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 RNU7-61P-201ENST00000515897 61 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 RNA5SP94-201ENST00000516917 108 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 CYP3A137P-201ENST00000562436 69 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 AP001318.4-201ENST00000616637 121 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 AC025521.1-201ENST00000621624 286 ntBASIC0.88□□□□□ -2.27
CCDC113Q9H0I3 MTATP8P2-201ENST00000435212 202 ntBASIC0.87□□□□□ -2.27
CCDC113Q9H0I3 AL590095.2-201ENST00000604136 117 ntBASIC0.87□□□□□ -2.27
CCDC113Q9H0I3 AC092634.7-201ENST00000621022 103 ntBASIC0.87□□□□□ -2.27
CCDC113Q9H0I3 RNU6-466P-201ENST00000391224 103 ntBASIC0.86□□□□□ -2.27
CCDC113Q9H0I3 RNU7-104P-201ENST00000459398 79 ntBASIC0.86□□□□□ -2.27
CCDC113Q9H0I3 RNA5SP47-201ENST00000517230 109 ntBASIC0.86□□□□□ -2.27
CCDC113Q9H0I3 AL513043.2-201ENST00000573941 143 ntBASIC0.86□□□□□ -2.27
CCDC113Q9H0I3 MIR151B-201ENST00000584249 96 ntBASIC0.86□□□□□ -2.27
CCDC113Q9H0I3 AC067863.3-201ENST00000624172 122 ntBASIC0.86□□□□□ -2.27
CCDC113Q9H0I3 Y_RNA.466-201ENST00000384294 113 ntBASIC0.85□□□□□ -2.27
CCDC113Q9H0I3 MIR518E-201ENST00000385252 88 ntBASIC0.85□□□□□ -2.27
CCDC113Q9H0I3 Y_RNA.677-201ENST00000516401 85 ntBASIC0.85□□□□□ -2.27
CCDC113Q9H0I3 RNU6-158P-201ENST00000517104 100 ntBASIC0.85□□□□□ -2.27
CCDC113Q9H0I3 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
CCDC113Q9H0I3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
CCDC113Q9H0I3 RNA5SP227-201ENST00000516184 113 ntBASIC0.84□□□□□ -2.27
CCDC113Q9H0I3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.84□□□□□ -2.27
CCDC113Q9H0I3 MIR6866-201ENST00000638146 69 ntBASIC0.84□□□□□ -2.27
CCDC113Q9H0I3 SNORD58A-201ENST00000383875 65 ntBASIC0.83□□□□□ -2.28
CCDC113Q9H0I3 RNU6-168P-201ENST00000516189 101 ntBASIC0.83□□□□□ -2.28
CCDC113Q9H0I3 RNU7-161P-201ENST00000517289 62 ntBASIC0.83□□□□□ -2.28
CCDC113Q9H0I3 RNU6-162P-201ENST00000516228 103 ntBASIC0.82□□□□□ -2.28
CCDC113Q9H0I3 RNA5SP268-201ENST00000516828 124 ntBASIC0.82□□□□□ -2.28
CCDC113Q9H0I3 RNA5SP403-201ENST00000363598 108 ntBASIC0.81□□□□□ -2.28
CCDC113Q9H0I3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.81□□□□□ -2.28
CCDC113Q9H0I3 Y_RNA.648-201ENST00000459455 110 ntBASIC0.81□□□□□ -2.28
CCDC113Q9H0I3 RNU7-13P-201ENST00000516413 62 ntBASIC0.81□□□□□ -2.28
CCDC113Q9H0I3 U7.3-201ENST00000616123 62 ntBASIC0.81□□□□□ -2.28
CCDC113Q9H0I3 TRDV1-202ENST00000621643 102 ntBASIC0.81□□□□□ -2.28
CCDC113Q9H0I3 RNU6-957P-201ENST00000363652 99 ntBASIC0.8□□□□□ -2.28
CCDC113Q9H0I3 SNORD116-10-201ENST00000363791 102 ntBASIC0.8□□□□□ -2.28
CCDC113Q9H0I3 RNU6-716P-201ENST00000365621 103 ntBASIC0.8□□□□□ -2.28
CCDC113Q9H0I3 SNORD71-201ENST00000411292 86 ntBASIC0.8□□□□□ -2.28
CCDC113Q9H0I3 snoU13.11-201ENST00000459219 104 ntBASIC0.8□□□□□ -2.28
CCDC113Q9H0I3 RNU6-65P-201ENST00000516332 98 ntBASIC0.8□□□□□ -2.28
CCDC113Q9H0I3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.8□□□□□ -2.28
CCDC113Q9H0I3 MIR5000-201ENST00000577717 103 ntBASIC0.8□□□□□ -2.28
CCDC113Q9H0I3 AC022709.1-201ENST00000615967 87 ntBASIC0.8□□□□□ -2.28
CCDC113Q9H0I3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
CCDC113Q9H0I3 SNORA36.1-201ENST00000363424 132 ntBASIC0.79□□□□□ -2.28
CCDC113Q9H0I3 RNA5SP517-201ENST00000364724 117 ntBASIC0.79□□□□□ -2.28
CCDC113Q9H0I3 Y_RNA.508-201ENST00000384502 114 ntBASIC0.79□□□□□ -2.28
CCDC113Q9H0I3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.79□□□□□ -2.28
CCDC113Q9H0I3 RNA5SP89-201ENST00000410300 108 ntBASIC0.79□□□□□ -2.28
CCDC113Q9H0I3 AL161932.1-201ENST00000437408 146 ntBASIC0.79□□□□□ -2.28
CCDC113Q9H0I3 MIR4536-1-201ENST00000583537 88 ntBASIC0.79□□□□□ -2.28
CCDC113Q9H0I3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.79□□□□□ -2.28
CCDC113Q9H0I3 Y_RNA.348-201ENST00000365403 103 ntBASIC0.78□□□□□ -2.28
CCDC113Q9H0I3 SNORA8.2-201ENST00000384372 139 ntBASIC0.78□□□□□ -2.28
CCDC113Q9H0I3 SNORA40.8-201ENST00000411034 126 ntBASIC0.78□□□□□ -2.28
CCDC113Q9H0I3 AC018659.1-201ENST00000551083 169 ntBASIC0.78□□□□□ -2.28
CCDC113Q9H0I3 MIR4714-201ENST00000580728 77 ntBASIC0.78□□□□□ -2.28
CCDC113Q9H0I3 AL078603.1-201ENST00000603824 313 ntBASIC0.78□□□□□ -2.28
CCDC113Q9H0I3 RNU6-519P-201ENST00000410590 108 ntBASIC0.77□□□□□ -2.29
CCDC113Q9H0I3 MIR6835-201ENST00000621552 64 ntBASIC0.77□□□□□ -2.29
CCDC113Q9H0I3 MIR6828-201ENST00000636181 60 ntBASIC0.77□□□□□ -2.29
CCDC113Q9H0I3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CCDC113Q9H0I3 Y_RNA.283-201ENST00000364798 112 ntBASIC0.76□□□□□ -2.29
CCDC113Q9H0I3 RNU6-945P-201ENST00000383947 107 ntBASIC0.76□□□□□ -2.29
CCDC113Q9H0I3 RNA5SP220-201ENST00000516298 104 ntBASIC0.76□□□□□ -2.29
CCDC113Q9H0I3 RNA5SP121-201ENST00000516537 101 ntBASIC0.76□□□□□ -2.29
CCDC113Q9H0I3 SNORD115-44-201ENST00000365391 82 ntBASIC0.75□□□□□ -2.29
CCDC113Q9H0I3 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
CCDC113Q9H0I3 Y_RNA.596-201ENST00000410462 109 ntBASIC0.75□□□□□ -2.29
CCDC113Q9H0I3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC113Q9H0I3 RNU4-54P-201ENST00000516428 129 ntBASIC0.75□□□□□ -2.29
CCDC113Q9H0I3 SNORA25.18-201ENST00000607153 114 ntBASIC0.75□□□□□ -2.29
CCDC113Q9H0I3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
CCDC113Q9H0I3 RNU6-726P-201ENST00000364680 107 ntBASIC0.74□□□□□ -2.29
CCDC113Q9H0I3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.74□□□□□ -2.29
CCDC113Q9H0I3 RNU6-905P-201ENST00000384434 107 ntBASIC0.73□□□□□ -2.29
CCDC113Q9H0I3 RNU6-1265P-201ENST00000516342 103 ntBASIC0.73□□□□□ -2.29
CCDC113Q9H0I3 Y_RNA.190-201ENST00000363964 101 ntBASIC0.72□□□□□ -2.29
CCDC113Q9H0I3 Y_RNA.290-201ENST00000364879 114 ntBASIC0.72□□□□□ -2.29
CCDC113Q9H0I3 RNU6-42P-201ENST00000384165 107 ntBASIC0.72□□□□□ -2.29
CCDC113Q9H0I3 MIR518A1-201ENST00000385068 85 ntBASIC0.72□□□□□ -2.29
CCDC113Q9H0I3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
CCDC113Q9H0I3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
CCDC113Q9H0I3 RNU7-74P-201ENST00000459104 62 ntBASIC0.72□□□□□ -2.29
CCDC113Q9H0I3 MIR3920-201ENST00000581751 86 ntBASIC0.72□□□□□ -2.29
CCDC113Q9H0I3 MIR7107-201ENST00000611489 80 ntBASIC0.72□□□□□ -2.29
CCDC113Q9H0I3 MALAT1.1-201ENST00000618249 95 ntBASIC0.72□□□□□ -2.29
CCDC113Q9H0I3 SNORD118-201ENST00000363593 134 ntBASIC0.71□□□□□ -2.3
CCDC113Q9H0I3 Y_RNA.220-201ENST00000364244 109 ntBASIC0.71□□□□□ -2.3
CCDC113Q9H0I3 snoU13.18-201ENST00000459483 104 ntBASIC0.71□□□□□ -2.3
CCDC113Q9H0I3 RN7SKP12-201ENST00000516275 143 ntBASIC0.71□□□□□ -2.3
CCDC113Q9H0I3 U6.100-201ENST00000636230 99 ntBASIC0.71□□□□□ -2.3
CCDC113Q9H0I3 RNU6-640P-201ENST00000363693 105 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms