Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 AC021753.1-201ENST00000635724 168 ntBASIC-0.83□□□□□ -2.54
CCDC43Q96MW1 SNORA63-201ENST00000363450 132 ntBASIC-0.84□□□□□ -2.54
CCDC43Q96MW1 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.84□□□□□ -2.54
CCDC43Q96MW1 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.84□□□□□ -2.54
CCDC43Q96MW1 RNU6-154P-201ENST00000384306 106 ntBASIC-0.84□□□□□ -2.54
CCDC43Q96MW1 SNORD38.2-201ENST00000384470 69 ntBASIC-0.84□□□□□ -2.54
CCDC43Q96MW1 MTCYBP9-201ENST00000431021 303 ntBASIC-0.84□□□□□ -2.54
CCDC43Q96MW1 MIR4432-201ENST00000581823 84 ntBASIC-0.84□□□□□ -2.54
CCDC43Q96MW1 AC062037.2-201ENST00000610137 73 ntBASIC-0.84□□□□□ -2.54
CCDC43Q96MW1 MIR1302-3-201ENST00000408128 138 ntBASIC-0.85□□□□□ -2.55
CCDC43Q96MW1 RNU6-735P-201ENST00000410612 107 ntBASIC-0.85□□□□□ -2.55
CCDC43Q96MW1 RNU6-138P-201ENST00000515952 107 ntBASIC-0.85□□□□□ -2.55
CCDC43Q96MW1 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.85□□□□□ -2.55
CCDC43Q96MW1 RNU7-121P-201ENST00000516604 62 ntBASIC-0.85□□□□□ -2.55
CCDC43Q96MW1 MIR539-201ENST00000365690 78 ntBASIC-0.86□□□□□ -2.55
CCDC43Q96MW1 RNU6-480P-201ENST00000384332 107 ntBASIC-0.86□□□□□ -2.55
CCDC43Q96MW1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
CCDC43Q96MW1 AC114755.3-201ENST00000481111 251 ntBASIC-0.86□□□□□ -2.55
CCDC43Q96MW1 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.86□□□□□ -2.55
CCDC43Q96MW1 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.87□□□□□ -2.55
CCDC43Q96MW1 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.87□□□□□ -2.55
CCDC43Q96MW1 TRDV1-202ENST00000621643 102 ntBASIC-0.87□□□□□ -2.55
CCDC43Q96MW1 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.88□□□□□ -2.55
CCDC43Q96MW1 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.88□□□□□ -2.55
CCDC43Q96MW1 MT-TY-201ENST00000387409 66 ntBASIC-0.88□□□□□ -2.55
CCDC43Q96MW1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.88□□□□□ -2.55
CCDC43Q96MW1 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.88□□□□□ -2.55
CCDC43Q96MW1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.88□□□□□ -2.55
CCDC43Q96MW1 MIR1255B1-201ENST00000636325 63 ntBASIC-0.88□□□□□ -2.55
CCDC43Q96MW1 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.89□□□□□ -2.55
CCDC43Q96MW1 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.89□□□□□ -2.55
CCDC43Q96MW1 RNU6-455P-201ENST00000384681 107 ntBASIC-0.89□□□□□ -2.55
CCDC43Q96MW1 RNU6-243P-201ENST00000391140 107 ntBASIC-0.89□□□□□ -2.55
CCDC43Q96MW1 IGKV1-22-201ENST00000524313 326 ntBASIC-0.89□□□□□ -2.55
CCDC43Q96MW1 MIR548AX-201ENST00000580117 73 ntBASIC-0.89□□□□□ -2.55
CCDC43Q96MW1 U6.100-201ENST00000636230 99 ntBASIC-0.89□□□□□ -2.55
CCDC43Q96MW1 SNORD36A-201ENST00000362874 73 ntBASIC-0.9□□□□□ -2.55
CCDC43Q96MW1 SNORD115-19-201ENST00000363098 82 ntBASIC-0.9□□□□□ -2.55
CCDC43Q96MW1 SNORD115-18-201ENST00000363293 82 ntBASIC-0.9□□□□□ -2.55
CCDC43Q96MW1 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.9□□□□□ -2.55
CCDC43Q96MW1 SNORD115-17-201ENST00000364612 82 ntBASIC-0.9□□□□□ -2.55
CCDC43Q96MW1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.9□□□□□ -2.55
CCDC43Q96MW1 SPINT5P-201ENST00000448174 155 ntBASIC-0.91□□□□□ -2.56
CCDC43Q96MW1 MIR3163-201ENST00000581592 73 ntBASIC-0.91□□□□□ -2.56
CCDC43Q96MW1 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.92□□□□□ -2.56
CCDC43Q96MW1 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.92□□□□□ -2.56
CCDC43Q96MW1 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.92□□□□□ -2.56
CCDC43Q96MW1 SNORA7.5-201ENST00000410672 110 ntBASIC-0.92□□□□□ -2.56
CCDC43Q96MW1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.92□□□□□ -2.56
CCDC43Q96MW1 SNORD57-201ENST00000448188 72 ntBASIC-0.93□□□□□ -2.56
CCDC43Q96MW1 RNU6-957P-201ENST00000363652 99 ntBASIC-0.94□□□□□ -2.56
CCDC43Q96MW1 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.94□□□□□ -2.56
CCDC43Q96MW1 MIR3121-201ENST00000579680 77 ntBASIC-0.94□□□□□ -2.56
CCDC43Q96MW1 AL512310.12-203ENST00000640543 90 ntBASIC-0.94□□□□□ -2.56
CCDC43Q96MW1 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.95□□□□□ -2.56
CCDC43Q96MW1 MIR9-2-201ENST00000384838 87 ntBASIC-0.95□□□□□ -2.56
CCDC43Q96MW1 MIR652-201ENST00000385278 98 ntBASIC-0.95□□□□□ -2.56
CCDC43Q96MW1 AC130289.1-201ENST00000577321 73 ntBASIC-0.95□□□□□ -2.56
CCDC43Q96MW1 AC141273.2-201ENST00000618989 130 ntBASIC-0.95□□□□□ -2.56
CCDC43Q96MW1 AL391099.1-201ENST00000624635 187 ntBASIC-0.95□□□□□ -2.56
CCDC43Q96MW1 MIR20A-201ENST00000362279 71 ntBASIC-0.96□□□□□ -2.56
CCDC43Q96MW1 SNORD114-14-201ENST00000362723 75 ntBASIC-0.96□□□□□ -2.56
CCDC43Q96MW1 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.96□□□□□ -2.56
CCDC43Q96MW1 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.96□□□□□ -2.56
CCDC43Q96MW1 MIR759-201ENST00000390224 91 ntBASIC-0.96□□□□□ -2.56
CCDC43Q96MW1 AL118496.2-201ENST00000448300 230 ntBASIC-0.96□□□□□ -2.56
CCDC43Q96MW1 AP000676.1-201ENST00000533307 52 ntBASIC-0.96□□□□□ -2.56
CCDC43Q96MW1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.96□□□□□ -2.56
CCDC43Q96MW1 AC072026.1-201ENST00000605023 201 ntBASIC-0.96□□□□□ -2.56
CCDC43Q96MW1 U4.1-201ENST00000620349 87 ntBASIC-0.96□□□□□ -2.56
CCDC43Q96MW1 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.97□□□□□ -2.56
CCDC43Q96MW1 RNU4-11P-201ENST00000365287 132 ntBASIC-0.97□□□□□ -2.56
CCDC43Q96MW1 RNU6-460P-201ENST00000391158 108 ntBASIC-0.97□□□□□ -2.56
CCDC43Q96MW1 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.97□□□□□ -2.56
CCDC43Q96MW1 RNU6-90P-201ENST00000606352 106 ntBASIC-0.97□□□□□ -2.56
CCDC43Q96MW1 AC093726.3-201ENST00000637588 150 ntBASIC-0.97□□□□□ -2.56
CCDC43Q96MW1 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.98□□□□□ -2.57
CCDC43Q96MW1 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.98□□□□□ -2.57
CCDC43Q96MW1 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.99□□□□□ -2.57
CCDC43Q96MW1 MIR1263-201ENST00000408324 86 ntBASIC-0.99□□□□□ -2.57
CCDC43Q96MW1 MIR548G-201ENST00000408442 89 ntBASIC-0.99□□□□□ -2.57
CCDC43Q96MW1 AL445193.1-201ENST00000441183 141 ntBASIC-0.99□□□□□ -2.57
CCDC43Q96MW1 AC007012.1-201ENST00000567192 175 ntBASIC-0.99□□□□□ -2.57
CCDC43Q96MW1 Y_RNA.198-201ENST00000364013 98 ntBASIC-1□□□□□ -2.57
CCDC43Q96MW1 Y_RNA.213-201ENST00000364178 111 ntBASIC-1□□□□□ -2.57
CCDC43Q96MW1 Y_RNA.644-201ENST00000459006 113 ntBASIC-1□□□□□ -2.57
CCDC43Q96MW1 RNU6-327P-201ENST00000516270 127 ntBASIC-1□□□□□ -2.57
CCDC43Q96MW1 Y_RNA.674-201ENST00000516362 113 ntBASIC-1□□□□□ -2.57
CCDC43Q96MW1 RNY1P9-201ENST00000532431 109 ntBASIC-1□□□□□ -2.57
CCDC43Q96MW1 RNU6-915P-201ENST00000364943 103 ntBASIC-1.01□□□□□ -2.57
CCDC43Q96MW1 RNU6-900P-201ENST00000384498 102 ntBASIC-1.01□□□□□ -2.57
CCDC43Q96MW1 RN7SKP19-201ENST00000516016 252 ntBASIC-1.01□□□□□ -2.57
CCDC43Q96MW1 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.02□□□□□ -2.57
CCDC43Q96MW1 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.02□□□□□ -2.57
CCDC43Q96MW1 SNORA3B-201ENST00000391305 131 ntBASIC-1.02□□□□□ -2.57
CCDC43Q96MW1 AC244090.1-201ENST00000441884 93 ntBASIC-1.02□□□□□ -2.57
CCDC43Q96MW1 RNU7-197P-201ENST00000458836 62 ntBASIC-1.02□□□□□ -2.57
CCDC43Q96MW1 RNA5SP169-201ENST00000517268 117 ntBASIC-1.02□□□□□ -2.57
CCDC43Q96MW1 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.03□□□□□ -2.57
CCDC43Q96MW1 SNORD38.1-201ENST00000363863 68 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 277.4 ms