Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 RNU7-55P-201ENST00000459426 62 ntBASIC-1.1□□□□□ -2.59
CCDC47Q96A33 AC108081.1-201ENST00000604358 221 ntBASIC-1.1□□□□□ -2.59
CCDC47Q96A33 U4.1-201ENST00000620349 87 ntBASIC-1.1□□□□□ -2.59
CCDC47Q96A33 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 RNU6-797P-201ENST00000363101 109 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 RNU6-957P-201ENST00000363652 99 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 SNORA49-201ENST00000386157 136 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 SPINT5P-201ENST00000448174 155 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 RNU6-881P-201ENST00000516813 102 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 AL117187.1-201ENST00000555482 181 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 AP001094.1-201ENST00000579805 193 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 AC145423.2-201ENST00000610631 239 ntBASIC-1.11□□□□□ -2.59
CCDC47Q96A33 RNY1P11-201ENST00000363759 113 ntBASIC-1.12□□□□□ -2.59
CCDC47Q96A33 SNORA13-201ENST00000458790 133 ntBASIC-1.12□□□□□ -2.59
CCDC47Q96A33 RNU4-71P-201ENST00000516258 113 ntBASIC-1.12□□□□□ -2.59
CCDC47Q96A33 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.12□□□□□ -2.59
CCDC47Q96A33 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.12□□□□□ -2.59
CCDC47Q96A33 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.12□□□□□ -2.59
CCDC47Q96A33 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.13□□□□□ -2.59
CCDC47Q96A33 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.13□□□□□ -2.59
CCDC47Q96A33 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.13□□□□□ -2.59
CCDC47Q96A33 MIR518B-201ENST00000385127 83 ntBASIC-1.13□□□□□ -2.59
CCDC47Q96A33 SNORA40.17-201ENST00000517256 115 ntBASIC-1.13□□□□□ -2.59
CCDC47Q96A33 MIR3681-201ENST00000580089 72 ntBASIC-1.13□□□□□ -2.59
CCDC47Q96A33 MIR196A1-201ENST00000388006 70 ntBASIC-1.14□□□□□ -2.59
CCDC47Q96A33 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.14□□□□□ -2.59
CCDC47Q96A33 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.14□□□□□ -2.59
CCDC47Q96A33 MTND5P18-201ENST00000445624 1801 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 RNA5SP368-201ENST00000364298 116 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 MIR216B-201ENST00000390186 82 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 MIR3179-1-201ENST00000578940 84 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 MIR3179-2-201ENST00000579107 84 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 MIR3179-3-201ENST00000579566 84 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 MIR548O2-201ENST00000616090 70 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 MIR3179-4-201ENST00000617599 84 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 AC021753.1-201ENST00000635724 168 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 MIR3658-201ENST00000636291 56 ntBASIC-1.15□□□□□ -2.59
CCDC47Q96A33 SNORD115-19-201ENST00000363098 82 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 SNORD115-18-201ENST00000363293 82 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 SNORD115-17-201ENST00000364612 82 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 SNORD101-201ENST00000384027 73 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 RNU6-239P-201ENST00000390990 99 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 RNU6-721P-201ENST00000410155 105 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 SNORD2-201ENST00000459163 69 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 RNU6-762P-201ENST00000517107 102 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 AC008737.2-201ENST00000599446 118 ntBASIC-1.16□□□□□ -2.6
CCDC47Q96A33 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.17□□□□□ -2.6
CCDC47Q96A33 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.17□□□□□ -2.6
CCDC47Q96A33 RNU4-63P-201ENST00000411313 118 ntBASIC-1.17□□□□□ -2.6
CCDC47Q96A33 MIR4696-201ENST00000581431 70 ntBASIC-1.17□□□□□ -2.6
CCDC47Q96A33 MIR3163-201ENST00000581592 73 ntBASIC-1.17□□□□□ -2.6
CCDC47Q96A33 AL512310.12-203ENST00000640543 90 ntBASIC-1.17□□□□□ -2.6
CCDC47Q96A33 RNU6-502P-201ENST00000362419 108 ntBASIC-1.18□□□□□ -2.6
CCDC47Q96A33 RNU6-973P-201ENST00000364690 107 ntBASIC-1.18□□□□□ -2.6
CCDC47Q96A33 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.18□□□□□ -2.6
CCDC47Q96A33 SNORA7.5-201ENST00000410672 110 ntBASIC-1.18□□□□□ -2.6
CCDC47Q96A33 MIR5704-201ENST00000584029 77 ntBASIC-1.18□□□□□ -2.6
CCDC47Q96A33 RNU6-90P-201ENST00000606352 106 ntBASIC-1.18□□□□□ -2.6
CCDC47Q96A33 RNU6-664P-201ENST00000362381 107 ntBASIC-1.19□□□□□ -2.6
CCDC47Q96A33 MIR606-201ENST00000384851 96 ntBASIC-1.19□□□□□ -2.6
CCDC47Q96A33 MT-TI-201ENST00000387365 69 ntBASIC-1.19□□□□□ -2.6
CCDC47Q96A33 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.19□□□□□ -2.6
CCDC47Q96A33 SNORD22.1-201ENST00000516331 125 ntBASIC-1.19□□□□□ -2.6
CCDC47Q96A33 MIR3128-201ENST00000581957 66 ntBASIC-1.19□□□□□ -2.6
CCDC47Q96A33 MIR1255B1-201ENST00000636325 63 ntBASIC-1.19□□□□□ -2.6
CCDC47Q96A33 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.2□□□□□ -2.6
CCDC47Q96A33 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.2□□□□□ -2.6
CCDC47Q96A33 RNU4-36P-201ENST00000364294 144 ntBASIC-1.2□□□□□ -2.6
CCDC47Q96A33 RNY1P7-201ENST00000384743 110 ntBASIC-1.2□□□□□ -2.6
CCDC47Q96A33 RNU6-466P-201ENST00000391224 103 ntBASIC-1.2□□□□□ -2.6
CCDC47Q96A33 MIR548G-201ENST00000408442 89 ntBASIC-1.2□□□□□ -2.6
CCDC47Q96A33 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.2□□□□□ -2.6
CCDC47Q96A33 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.2□□□□□ -2.6
CCDC47Q96A33 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.2□□□□□ -2.6
CCDC47Q96A33 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.21□□□□□ -2.6
CCDC47Q96A33 SNORD114-25-201ENST00000363742 72 ntBASIC-1.21□□□□□ -2.6
CCDC47Q96A33 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.21□□□□□ -2.6
CCDC47Q96A33 SNORD114-15-201ENST00000364687 72 ntBASIC-1.21□□□□□ -2.6
CCDC47Q96A33 MIR582-201ENST00000365731 98 ntBASIC-1.21□□□□□ -2.6
CCDC47Q96A33 RNU6-476P-201ENST00000384726 107 ntBASIC-1.21□□□□□ -2.6
CCDC47Q96A33 AP001328.1-201ENST00000528550 176 ntBASIC-1.21□□□□□ -2.6
CCDC47Q96A33 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 RNU6-54P-201ENST00000365563 107 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 MIR517B-201ENST00000385102 67 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 SNORD83B-201ENST00000386745 93 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 AC022137.1-201ENST00000483735 151 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 RNU7-121P-201ENST00000516604 62 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 MIR6854-201ENST00000614935 69 ntBASIC-1.22□□□□□ -2.6
CCDC47Q96A33 SNORD114-4-201ENST00000363962 75 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms