Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC009779.6-201ENST00000603972 165 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 MIR8068-201ENST00000618032 68 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 AC022137.1-201ENST00000483735 151 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 SNORA32-201ENST00000384072 121 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU6-561P-201ENST00000516222 102 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 MIR4773-1-201ENST00000637203 78 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU6-310P-201ENST00000384655 107 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 MT-TL1-201ENST00000386347 75 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU6-62P-201ENST00000516526 102 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 AL137067.1-201ENST00000615933 120 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU6-409P-201ENST00000384114 104 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 MIR548H3-201ENST00000408771 118 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU7-134P-201ENST00000458997 64 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 AC103591.3-201ENST00000608684 209 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 AP000770.2-201ENST00000623694 100 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 SNORD115-35-201ENST00000365122 82 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 RNU6-719P-201ENST00000516671 104 ntBASIC-0.29□□□□□ -2.46
SYNE1Q8NF91 MIR369-201ENST00000362155 70 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNU6-170P-201ENST00000362832 104 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR1302-11-201ENST00000408051 138 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR1302-9-201ENST00000408365 138 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR1302-10-201ENST00000408734 138 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNA5SP147-201ENST00000516493 109 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR1302-2-201ENST00000607096 138 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 AP000533.3-201ENST00000447704 118 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNU6-277P-201ENST00000516272 106 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR4744-201ENST00000581563 82 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 SNORA62.4-201ENST00000365504 151 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR376B-201ENST00000614515 100 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR548O2-201ENST00000616090 70 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 SNORA25.1-201ENST00000362326 128 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNU6-988P-201ENST00000519081 107 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNU6-664P-201ENST00000362381 107 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR521-2-201ENST00000384818 87 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNU7-195P-201ENST00000458793 62 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 AC138907.4-201ENST00000570107 226 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR507-201ENST00000385234 94 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR759-201ENST00000390224 91 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MIR548U-201ENST00000390728 81 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 AC022028.1-201ENST00000412054 408 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 MTND1P19-201ENST00000511780 315 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.3□□□□□ -2.46
SYNE1Q8NF91 RNY1P11-201ENST00000363759 113 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU6-476P-201ENST00000384726 107 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 MTND3P22-201ENST00000510932 243 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 AL353803.5-201ENST00000599815 141 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RPS29P30-201ENST00000600975 111 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 SNORA22.1-201ENST00000362701 134 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU4-58P-201ENST00000363192 141 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU7-2P-201ENST00000516096 62 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 MIR539-201ENST00000365690 78 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 SNORA26.4-201ENST00000391188 123 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 MIR3646-201ENST00000578301 84 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 MIR1302-1-201ENST00000637932 143 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU6-524P-201ENST00000384270 107 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 SNORD42B-201ENST00000458893 67 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 MIR4464-201ENST00000580818 92 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU2-4P-201ENST00000606190 192 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 AC073869.6-201ENST00000640656 341 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU6-905P-201ENST00000384434 107 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 SNORA63.6-201ENST00000364921 119 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU6-721P-201ENST00000410155 105 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU6-592P-201ENST00000411333 103 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU6-704P-201ENST00000364162 103 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms