Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 MIR4802-201ENST00000581881 80 ntBASIC-0.33□□□□□ -2.46
PRPF39Q86UA1 AL512310.12-203ENST00000640543 90 ntBASIC-0.33□□□□□ -2.46
PRPF39Q86UA1 SNORA7.5-201ENST00000410672 110 ntBASIC-0.34□□□□□ -2.46
PRPF39Q86UA1 MIR548AE1-201ENST00000583292 70 ntBASIC-0.34□□□□□ -2.46
PRPF39Q86UA1 MIR6507-201ENST00000613630 70 ntBASIC-0.34□□□□□ -2.46
PRPF39Q86UA1 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.35□□□□□ -2.47
PRPF39Q86UA1 U8.6-201ENST00000364939 135 ntBASIC-0.35□□□□□ -2.47
PRPF39Q86UA1 MIR519E-201ENST00000385075 84 ntBASIC-0.35□□□□□ -2.47
PRPF39Q86UA1 SPINT5P-201ENST00000448174 155 ntBASIC-0.35□□□□□ -2.47
PRPF39Q86UA1 MIR548X2-201ENST00000579776 100 ntBASIC-0.35□□□□□ -2.47
PRPF39Q86UA1 MIR1255B1-201ENST00000636325 63 ntBASIC-0.35□□□□□ -2.47
PRPF39Q86UA1 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.36□□□□□ -2.47
PRPF39Q86UA1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.36□□□□□ -2.47
PRPF39Q86UA1 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.36□□□□□ -2.47
PRPF39Q86UA1 SNORD115-44-201ENST00000365391 82 ntBASIC-0.36□□□□□ -2.47
PRPF39Q86UA1 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.36□□□□□ -2.47
PRPF39Q86UA1 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.36□□□□□ -2.47
PRPF39Q86UA1 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.36□□□□□ -2.47
PRPF39Q86UA1 AC244250.2-201ENST00000418731 148 ntBASIC-0.36□□□□□ -2.47
PRPF39Q86UA1 RNU7-188P-201ENST00000517063 64 ntBASIC-0.36□□□□□ -2.47
PRPF39Q86UA1 MIR655-201ENST00000362159 97 ntBASIC-0.37□□□□□ -2.47
PRPF39Q86UA1 SNORD49B-201ENST00000365172 72 ntBASIC-0.37□□□□□ -2.47
PRPF39Q86UA1 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.37□□□□□ -2.47
PRPF39Q86UA1 RNU6-735P-201ENST00000410612 107 ntBASIC-0.37□□□□□ -2.47
PRPF39Q86UA1 AC093423.1-201ENST00000440817 142 ntBASIC-0.37□□□□□ -2.47
PRPF39Q86UA1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.37□□□□□ -2.47
PRPF39Q86UA1 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.37□□□□□ -2.47
PRPF39Q86UA1 RNU6-182P-201ENST00000516970 105 ntBASIC-0.37□□□□□ -2.47
PRPF39Q86UA1 YWHAEP2-201ENST00000580066 112 ntBASIC-0.37□□□□□ -2.47
PRPF39Q86UA1 AP001340.1-201ENST00000624405 217 ntBASIC-0.37□□□□□ -2.47
PRPF39Q86UA1 RNU6-46P-201ENST00000383860 107 ntBASIC-0.38□□□□□ -2.47
PRPF39Q86UA1 RNU6-243P-201ENST00000391140 107 ntBASIC-0.38□□□□□ -2.47
PRPF39Q86UA1 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.38□□□□□ -2.47
PRPF39Q86UA1 RNA5SP205-201ENST00000364653 136 ntBASIC-0.39□□□□□ -2.47
PRPF39Q86UA1 SNORA51.5-201ENST00000384126 131 ntBASIC-0.39□□□□□ -2.47
PRPF39Q86UA1 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.39□□□□□ -2.47
PRPF39Q86UA1 MIR148A-201ENST00000362215 68 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 RNU6-811P-201ENST00000384069 107 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 RNU6-804P-201ENST00000384286 107 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 MIR548D2-201ENST00000384955 97 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 MIR181B2-201ENST00000385004 89 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 MIR617-201ENST00000385030 97 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 RNU6-394P-201ENST00000410735 107 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 AC109327.2-201ENST00000448339 378 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 MIR2113-201ENST00000459007 91 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 RNU6-287P-201ENST00000516230 98 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 U6.100-201ENST00000636230 99 ntBASIC-0.4□□□□□ -2.47
PRPF39Q86UA1 RNU6-175P-201ENST00000516896 107 ntBASIC-0.41□□□□□ -2.48
PRPF39Q86UA1 MIR4645-201ENST00000583158 77 ntBASIC-0.41□□□□□ -2.48
PRPF39Q86UA1 U7.2-201ENST00000607576 63 ntBASIC-0.41□□□□□ -2.48
PRPF39Q86UA1 AC069503.3-201ENST00000618674 145 ntBASIC-0.41□□□□□ -2.48
PRPF39Q86UA1 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 MIR1265-201ENST00000408444 86 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 AL158147.1-201ENST00000443970 75 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 MIR4460-201ENST00000577862 86 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 MIR3144-201ENST00000579460 79 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 AP001180.6-201ENST00000584918 159 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 RNU6-90P-201ENST00000606352 106 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 MIR3666-201ENST00000607845 111 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 uc_338.10-201ENST00000621872 182 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 MIR4788-201ENST00000639104 80 ntBASIC-0.42□□□□□ -2.48
PRPF39Q86UA1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 SNORD36A-201ENST00000362874 73 ntBASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 RNA5SP98-201ENST00000363158 137 ntBASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 MIR539-201ENST00000365690 78 ntBASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 AL353813.1-201ENST00000440700 253 ntBASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 TRDV1-202ENST00000621643 102 ntBASIC-0.43□□□□□ -2.48
PRPF39Q86UA1 RNU6-957P-201ENST00000363652 99 ntBASIC-0.44□□□□□ -2.48
PRPF39Q86UA1 SNORD38.1-201ENST00000363863 68 ntBASIC-0.44□□□□□ -2.48
PRPF39Q86UA1 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.44□□□□□ -2.48
PRPF39Q86UA1 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.44□□□□□ -2.48
PRPF39Q86UA1 RNU6-409P-201ENST00000384114 104 ntBASIC-0.44□□□□□ -2.48
PRPF39Q86UA1 RNU6-154P-201ENST00000384306 106 ntBASIC-0.44□□□□□ -2.48
PRPF39Q86UA1 MIR548G-201ENST00000408442 89 ntBASIC-0.44□□□□□ -2.48
PRPF39Q86UA1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
PRPF39Q86UA1 AL162726.3-218ENST00000636401 95 ntBASIC-0.44□□□□□ -2.48
PRPF39Q86UA1 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.45□□□□□ -2.48
PRPF39Q86UA1 RNU6-363P-201ENST00000362895 105 ntBASIC-0.45□□□□□ -2.48
PRPF39Q86UA1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.45□□□□□ -2.48
PRPF39Q86UA1 AL590491.3-201ENST00000610731 82 ntBASIC-0.45□□□□□ -2.48
PRPF39Q86UA1 RNY4P6-201ENST00000363667 96 ntBASIC-0.46□□□□□ -2.48
PRPF39Q86UA1 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.46□□□□□ -2.48
PRPF39Q86UA1 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.46□□□□□ -2.48
PRPF39Q86UA1 RNU6-781P-201ENST00000516377 101 ntBASIC-0.46□□□□□ -2.48
PRPF39Q86UA1 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.46□□□□□ -2.48
PRPF39Q86UA1 MIR4493-201ENST00000584016 73 ntBASIC-0.46□□□□□ -2.48
PRPF39Q86UA1 MIR6086-201ENST00000638065 55 ntBASIC-0.46□□□□□ -2.48
PRPF39Q86UA1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.47□□□□□ -2.48
PRPF39Q86UA1 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.47□□□□□ -2.48
PRPF39Q86UA1 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.47□□□□□ -2.48
PRPF39Q86UA1 MT-TY-201ENST00000387409 66 ntBASIC-0.47□□□□□ -2.48
PRPF39Q86UA1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 245.5 ms