Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.68□□□□□ -2.3
KRT28Q7Z3Y7 MIR548G-201ENST00000408442 89 ntBASIC0.67□□□□□ -2.3
KRT28Q7Z3Y7 AC114737.2-201ENST00000421583 173 ntBASIC0.67□□□□□ -2.3
KRT28Q7Z3Y7 RNA5SP94-201ENST00000516917 108 ntBASIC0.67□□□□□ -2.3
KRT28Q7Z3Y7 RNU6-850P-201ENST00000516934 103 ntBASIC0.67□□□□□ -2.3
KRT28Q7Z3Y7 Y_RNA.709-201ENST00000516952 92 ntBASIC0.67□□□□□ -2.3
KRT28Q7Z3Y7 MIR3613-201ENST00000579844 87 ntBASIC0.67□□□□□ -2.3
KRT28Q7Z3Y7 MIR4639-201ENST00000584938 69 ntBASIC0.67□□□□□ -2.3
KRT28Q7Z3Y7 AC092634.7-201ENST00000621022 103 ntBASIC0.67□□□□□ -2.3
KRT28Q7Z3Y7 MIR6828-201ENST00000636181 60 ntBASIC0.67□□□□□ -2.3
KRT28Q7Z3Y7 MIR6759-201ENST00000638110 65 ntBASIC0.67□□□□□ -2.3
KRT28Q7Z3Y7 Y_RNA.78-201ENST00000362970 110 ntBASIC0.66□□□□□ -2.3
KRT28Q7Z3Y7 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
KRT28Q7Z3Y7 AC097635.1-201ENST00000450678 155 ntBASIC0.66□□□□□ -2.3
KRT28Q7Z3Y7 RNA5SP47-201ENST00000517230 109 ntBASIC0.66□□□□□ -2.3
KRT28Q7Z3Y7 RNU6-90P-201ENST00000606352 106 ntBASIC0.66□□□□□ -2.3
KRT28Q7Z3Y7 SNORA36.1-201ENST00000363424 132 ntBASIC0.65□□□□□ -2.31
KRT28Q7Z3Y7 SNORD28-201ENST00000384706 75 ntBASIC0.65□□□□□ -2.31
KRT28Q7Z3Y7 AC067863.3-201ENST00000624172 122 ntBASIC0.65□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-1290P-201ENST00000362957 109 ntBASIC0.64□□□□□ -2.31
KRT28Q7Z3Y7 Y_RNA.342-201ENST00000365352 113 ntBASIC0.64□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
KRT28Q7Z3Y7 SNORD63B-201ENST00000411005 70 ntBASIC0.64□□□□□ -2.31
KRT28Q7Z3Y7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.64□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-1163P-201ENST00000364516 107 ntBASIC0.63□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-215P-201ENST00000365169 102 ntBASIC0.63□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-106P-201ENST00000384405 107 ntBASIC0.63□□□□□ -2.31
KRT28Q7Z3Y7 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-537P-201ENST00000517277 103 ntBASIC0.63□□□□□ -2.31
KRT28Q7Z3Y7 AC018659.1-201ENST00000551083 169 ntBASIC0.63□□□□□ -2.31
KRT28Q7Z3Y7 AC023932.2-201ENST00000603176 175 ntBASIC0.63□□□□□ -2.31
KRT28Q7Z3Y7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.63□□□□□ -2.31
KRT28Q7Z3Y7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-1260P-201ENST00000362944 107 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 SNORD115-24-201ENST00000363528 82 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 RNA5SP403-201ENST00000363598 108 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 RNY4P18-201ENST00000391107 89 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 RNU7-106P-201ENST00000459514 67 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-904P-201ENST00000516206 101 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 RN7SKP12-201ENST00000516275 143 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 AC141557.1-201ENST00000540982 400 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 MIR548AI-201ENST00000579940 88 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 MIR4439-201ENST00000583746 80 ntBASIC0.62□□□□□ -2.31
KRT28Q7Z3Y7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
KRT28Q7Z3Y7 Y_RNA.163-201ENST00000363702 113 ntBASIC0.61□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-755P-201ENST00000364400 103 ntBASIC0.61□□□□□ -2.31
KRT28Q7Z3Y7 RNA5SP517-201ENST00000364724 117 ntBASIC0.61□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-1325P-201ENST00000364905 105 ntBASIC0.61□□□□□ -2.31
KRT28Q7Z3Y7 MIR329-2-201ENST00000385029 84 ntBASIC0.61□□□□□ -2.31
KRT28Q7Z3Y7 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-1244P-201ENST00000363614 108 ntBASIC0.6□□□□□ -2.31
KRT28Q7Z3Y7 MIR599-201ENST00000385069 95 ntBASIC0.6□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-554P-201ENST00000410466 106 ntBASIC0.6□□□□□ -2.31
KRT28Q7Z3Y7 RNU7-161P-201ENST00000517289 62 ntBASIC0.6□□□□□ -2.31
KRT28Q7Z3Y7 AC244669.1-204ENST00000621564 178 ntBASIC0.6□□□□□ -2.31
KRT28Q7Z3Y7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.6□□□□□ -2.31
KRT28Q7Z3Y7 SNORD118-201ENST00000363593 134 ntBASIC0.59□□□□□ -2.31
KRT28Q7Z3Y7 SNORA8.2-201ENST00000384372 139 ntBASIC0.59□□□□□ -2.31
KRT28Q7Z3Y7 Y_RNA.601-201ENST00000410500 113 ntBASIC0.59□□□□□ -2.31
KRT28Q7Z3Y7 SNORA40.8-201ENST00000411034 126 ntBASIC0.59□□□□□ -2.31
KRT28Q7Z3Y7 RNU7-195P-201ENST00000458793 62 ntBASIC0.59□□□□□ -2.31
KRT28Q7Z3Y7 Y_RNA.809-201ENST00000516058 95 ntBASIC0.59□□□□□ -2.31
KRT28Q7Z3Y7 RNA5SP227-201ENST00000516184 113 ntBASIC0.59□□□□□ -2.31
KRT28Q7Z3Y7 RNU6-1265P-201ENST00000516342 103 ntBASIC0.59□□□□□ -2.31
KRT28Q7Z3Y7 Y_RNA.10-201ENST00000362371 110 ntBASIC0.58□□□□□ -2.32
KRT28Q7Z3Y7 SNORD36A-201ENST00000362874 73 ntBASIC0.58□□□□□ -2.32
KRT28Q7Z3Y7 Y_RNA.221-201ENST00000364248 96 ntBASIC0.58□□□□□ -2.32
KRT28Q7Z3Y7 MIR516A2-201ENST00000384888 90 ntBASIC0.58□□□□□ -2.32
KRT28Q7Z3Y7 MIR516A1-201ENST00000385033 90 ntBASIC0.58□□□□□ -2.32
KRT28Q7Z3Y7 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
KRT28Q7Z3Y7 Y_RNA.659-201ENST00000515994 113 ntBASIC0.58□□□□□ -2.32
KRT28Q7Z3Y7 RNA5SP268-201ENST00000516828 124 ntBASIC0.58□□□□□ -2.32
KRT28Q7Z3Y7 Y_RNA.95-201ENST00000363079 95 ntBASIC0.57□□□□□ -2.32
KRT28Q7Z3Y7 RNU4-36P-201ENST00000364294 144 ntBASIC0.57□□□□□ -2.32
KRT28Q7Z3Y7 SNORD45B-201ENST00000364617 72 ntBASIC0.57□□□□□ -2.32
KRT28Q7Z3Y7 MIR548L-201ENST00000408303 86 ntBASIC0.57□□□□□ -2.32
KRT28Q7Z3Y7 MIR5589-201ENST00000579442 60 ntBASIC0.57□□□□□ -2.32
KRT28Q7Z3Y7 SNORA25.18-201ENST00000607153 114 ntBASIC0.57□□□□□ -2.32
KRT28Q7Z3Y7 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
KRT28Q7Z3Y7 AC091304.10-201ENST00000641554 121 ntBASIC0.57□□□□□ -2.32
KRT28Q7Z3Y7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
KRT28Q7Z3Y7 Y_RNA.57-201ENST00000362806 113 ntBASIC0.56□□□□□ -2.32
KRT28Q7Z3Y7 RNU6-1254P-201ENST00000391266 104 ntBASIC0.56□□□□□ -2.32
KRT28Q7Z3Y7 MIR1302-5-201ENST00000408164 150 ntBASIC0.56□□□□□ -2.32
KRT28Q7Z3Y7 SNORA19.1-201ENST00000410656 129 ntBASIC0.56□□□□□ -2.32
KRT28Q7Z3Y7 AC109327.2-201ENST00000448339 378 ntBASIC0.56□□□□□ -2.32
KRT28Q7Z3Y7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
KRT28Q7Z3Y7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.56□□□□□ -2.32
KRT28Q7Z3Y7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.56□□□□□ -2.32
KRT28Q7Z3Y7 RNU6-726P-201ENST00000364680 107 ntBASIC0.55□□□□□ -2.32
KRT28Q7Z3Y7 SNORD20-201ENST00000384550 80 ntBASIC0.55□□□□□ -2.32
KRT28Q7Z3Y7 MIR518A1-201ENST00000385068 85 ntBASIC0.55□□□□□ -2.32
KRT28Q7Z3Y7 SNORD41.1-201ENST00000391000 69 ntBASIC0.55□□□□□ -2.32
KRT28Q7Z3Y7 RNU7-104P-201ENST00000459398 79 ntBASIC0.55□□□□□ -2.32
KRT28Q7Z3Y7 MIR4777-201ENST00000583710 86 ntBASIC0.55□□□□□ -2.32
KRT28Q7Z3Y7 MIR7107-201ENST00000611489 80 ntBASIC0.55□□□□□ -2.32
KRT28Q7Z3Y7 uc_338.28-201ENST00000612082 187 ntBASIC0.55□□□□□ -2.32
KRT28Q7Z3Y7 RNU6-919P-201ENST00000516731 104 ntBASIC0.54□□□□□ -2.32
KRT28Q7Z3Y7 MIR4802-201ENST00000581881 80 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms