Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.437-201ENST00000384113 113 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNU6-571P-201ENST00000384128 107 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNU6-524P-201ENST00000384270 107 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.611-201ENST00000410682 108 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNU7-106P-201ENST00000459514 67 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNA5SP436-201ENST00000516020 115 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNU7-156P-201ENST00000517214 74 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 MIR4676-201ENST00000583078 72 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 MIR6082-201ENST00000613604 109 ntBASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SLC44A4Q53GD3 RNU6-633P-201ENST00000362612 103 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.94-201ENST00000363068 106 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 MIR200A-201ENST00000384875 90 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 MIR100-201ENST00000385259 80 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 RNU6-279P-201ENST00000391297 101 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 AC067940.1-201ENST00000458411 300 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 RNU6-857P-201ENST00000515893 110 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 RNU7-153P-201ENST00000516455 62 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 MIR3202-2-201ENST00000635980 79 ntBASIC1.12□□□□□ -2.23
SLC44A4Q53GD3 MIR101-2-201ENST00000362195 79 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 SNORD114-24-201ENST00000365029 72 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 RNU6-652P-201ENST00000365488 107 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 SNORD100-201ENST00000408573 76 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 RNU7-85P-201ENST00000458851 63 ntBASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.11□□□□□ -2.23
SLC44A4Q53GD3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.1□□□□□ -2.23
SLC44A4Q53GD3 SNORD63B-201ENST00000411005 70 ntBASIC1.1□□□□□ -2.23
SLC44A4Q53GD3 TRAJ51-201ENST00000504127 63 ntBASIC1.1□□□□□ -2.23
SLC44A4Q53GD3 MIR1-1-201ENST00000362147 71 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 MIR373-201ENST00000362273 69 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 SNORD36A-201ENST00000362874 73 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.205-201ENST00000364128 113 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 Y_RNA.316-201ENST00000365118 111 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 RNU6-364P-201ENST00000384387 107 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 MIR1827-201ENST00000408549 66 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 FABP5P4-201ENST00000437203 171 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 RNU7-102P-201ENST00000458948 62 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 snoU13.11-201ENST00000459219 104 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 RNU6-977P-201ENST00000516411 103 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 MIR4804-201ENST00000581683 73 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 AC008608.1-201ENST00000603910 127 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
SLC44A4Q53GD3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
SLC44A4Q53GD3 RNU6-242P-201ENST00000384359 107 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 MIR635-201ENST00000384830 98 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 MIR938-201ENST00000401216 83 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 MIR889-201ENST00000401280 79 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 RNU6-519P-201ENST00000410590 108 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 RNU7-56P-201ENST00000458744 62 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 RNU7-195P-201ENST00000458793 62 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 MIR5000-201ENST00000577717 103 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 SNORD92-201ENST00000585078 85 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.08□□□□□ -2.24
SLC44A4Q53GD3 RNU6-243P-201ENST00000391140 107 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 RNU6-1254P-201ENST00000391266 104 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 SNORD4B-201ENST00000459083 72 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 RNA5SP255-201ENST00000516370 107 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.07□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNU6-478P-201ENST00000363904 110 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNA5SP245-201ENST00000364239 121 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 MIR520F-201ENST00000384824 87 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 SNORD90-201ENST00000391145 111 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 AC092628.1-201ENST00000436250 252 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 AL161932.1-201ENST00000437408 146 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNU6-65P-201ENST00000516332 98 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNU6-765P-201ENST00000516916 99 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNU6-448P-201ENST00000517052 107 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 AC140658.3-201ENST00000567603 271 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.788-201ENST00000622394 112 ntBASIC1.06□□□□□ -2.24
SLC44A4Q53GD3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 Y_RNA.426-201ENST00000384068 113 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 U7.7-201ENST00000459276 60 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 RNU6-75P-201ENST00000515944 104 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 MIR548H5-201ENST00000580314 60 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 MIR4712-201ENST00000583750 82 ntBASIC1.05□□□□□ -2.24
SLC44A4Q53GD3 RNU4-32P-201ENST00000363404 141 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU6-957P-201ENST00000363652 99 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU6-1229P-201ENST00000364295 107 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU6-291P-201ENST00000384720 107 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU6-535P-201ENST00000384722 107 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNA5SP292-201ENST00000390974 118 ntBASIC1.04□□□□□ -2.24
SLC44A4Q53GD3 RNU1-119P-201ENST00000391122 165 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 226.7 ms