Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
CTC1Q2NKJ3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CTC1Q2NKJ3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
CTC1Q2NKJ3 SUMO2P12-201ENST00000405924 140 ntBASIC2.35□□□□□ -2.03
CTC1Q2NKJ3 AC104435.1-201ENST00000483483 166 ntBASIC2.35□□□□□ -2.03
CTC1Q2NKJ3 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
CTC1Q2NKJ3 RNU6-765P-201ENST00000516916 99 ntBASIC2.35□□□□□ -2.03
CTC1Q2NKJ3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTC1Q2NKJ3 RNU1-17P-201ENST00000363022 152 ntBASIC2.34□□□□□ -2.03
CTC1Q2NKJ3 AP003716.2-201ENST00000528260 108 ntBASIC2.34□□□□□ -2.03
CTC1Q2NKJ3 MIR4287-201ENST00000579398 78 ntBASIC2.34□□□□□ -2.03
CTC1Q2NKJ3 SNRPGP19-201ENST00000603826 189 ntBASIC2.34□□□□□ -2.03
CTC1Q2NKJ3 MIR6840-201ENST00000611937 71 ntBASIC2.34□□□□□ -2.03
CTC1Q2NKJ3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CTC1Q2NKJ3 RNA5SP215-201ENST00000363440 122 ntBASIC2.33□□□□□ -2.04
CTC1Q2NKJ3 RNU6-535P-201ENST00000384722 107 ntBASIC2.33□□□□□ -2.04
CTC1Q2NKJ3 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
CTC1Q2NKJ3 RNA5SP147-201ENST00000516493 109 ntBASIC2.33□□□□□ -2.04
CTC1Q2NKJ3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.33□□□□□ -2.04
CTC1Q2NKJ3 AL773524.1-201ENST00000614065 229 ntBASIC2.33□□□□□ -2.04
CTC1Q2NKJ3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.32□□□□□ -2.04
CTC1Q2NKJ3 RNU6-1053P-201ENST00000515930 101 ntBASIC2.32□□□□□ -2.04
CTC1Q2NKJ3 RNU6-1089P-201ENST00000516473 104 ntBASIC2.32□□□□□ -2.04
CTC1Q2NKJ3 GHRLOS.1-201ENST00000610995 70 ntBASIC2.32□□□□□ -2.04
CTC1Q2NKJ3 MIR6845-201ENST00000613182 61 ntBASIC2.32□□□□□ -2.04
CTC1Q2NKJ3 MIR6766-201ENST00000622641 72 ntBASIC2.32□□□□□ -2.04
CTC1Q2NKJ3 AP000553.5-201ENST00000641933 54 ntBASIC2.32□□□□□ -2.04
CTC1Q2NKJ3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CTC1Q2NKJ3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CTC1Q2NKJ3 RNA5SP264-201ENST00000363115 107 ntBASIC2.31□□□□□ -2.04
CTC1Q2NKJ3 RNU6-54P-201ENST00000365563 107 ntBASIC2.31□□□□□ -2.04
CTC1Q2NKJ3 AL133373.1-201ENST00000497098 94 ntBASIC2.31□□□□□ -2.04
CTC1Q2NKJ3 RNU6-656P-201ENST00000516785 107 ntBASIC2.31□□□□□ -2.04
CTC1Q2NKJ3 SNORD115-44-201ENST00000365391 82 ntBASIC2.3□□□□□ -2.04
CTC1Q2NKJ3 MIR630-201ENST00000384957 97 ntBASIC2.3□□□□□ -2.04
CTC1Q2NKJ3 AL161935.2-201ENST00000414627 60 ntBASIC2.3□□□□□ -2.04
CTC1Q2NKJ3 MIR548AG2-201ENST00000581228 64 ntBASIC2.3□□□□□ -2.04
CTC1Q2NKJ3 MIR4713-201ENST00000582691 75 ntBASIC2.3□□□□□ -2.04
CTC1Q2NKJ3 RNU6-260P-201ENST00000384092 107 ntBASIC2.29□□□□□ -2.04
CTC1Q2NKJ3 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
CTC1Q2NKJ3 MIR1287-201ENST00000408492 90 ntBASIC2.29□□□□□ -2.04
CTC1Q2NKJ3 RNU7-13P-201ENST00000516413 62 ntBASIC2.29□□□□□ -2.04
CTC1Q2NKJ3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.29□□□□□ -2.04
CTC1Q2NKJ3 RNU6-302P-201ENST00000365249 107 ntBASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 RNU6-439P-201ENST00000384188 106 ntBASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 MIR548C-201ENST00000384815 97 ntBASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 HMGN2P38-201ENST00000423806 265 ntBASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 MIR4771-2-201ENST00000577758 74 ntBASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 MIR4771-1-201ENST00000582617 74 ntBASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 AL645939.4-201ENST00000604495 135 ntBASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 MIR8074-201ENST00000615081 81 ntBASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CTC1Q2NKJ3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
CTC1Q2NKJ3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.05
CTC1Q2NKJ3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CTC1Q2NKJ3 MIR125B2-201ENST00000385128 89 ntBASIC2.27□□□□□ -2.05
CTC1Q2NKJ3 RNU6-902P-201ENST00000517212 91 ntBASIC2.27□□□□□ -2.05
CTC1Q2NKJ3 MIR4781-201ENST00000585250 76 ntBASIC2.27□□□□□ -2.05
CTC1Q2NKJ3 AC008608.1-201ENST00000603910 127 ntBASIC2.27□□□□□ -2.05
CTC1Q2NKJ3 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
CTC1Q2NKJ3 MIRLET7G-201ENST00000362280 84 ntBASIC2.26□□□□□ -2.05
CTC1Q2NKJ3 RNU6-934P-201ENST00000365154 107 ntBASIC2.26□□□□□ -2.05
CTC1Q2NKJ3 MIR7-2-201ENST00000384970 110 ntBASIC2.26□□□□□ -2.05
CTC1Q2NKJ3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CTC1Q2NKJ3 SNORD42B-201ENST00000458893 67 ntBASIC2.26□□□□□ -2.05
CTC1Q2NKJ3 RNU6-990P-201ENST00000364385 104 ntBASIC2.25□□□□□ -2.05
CTC1Q2NKJ3 RNU6-1126P-201ENST00000384002 107 ntBASIC2.25□□□□□ -2.05
CTC1Q2NKJ3 RNU4-52P-201ENST00000384209 138 ntBASIC2.25□□□□□ -2.05
CTC1Q2NKJ3 RNA5SP338-201ENST00000410495 85 ntBASIC2.25□□□□□ -2.05
CTC1Q2NKJ3 AC108667.1-201ENST00000428618 249 ntBASIC2.25□□□□□ -2.05
CTC1Q2NKJ3 AC244505.6-201ENST00000452829 130 ntBASIC2.25□□□□□ -2.05
CTC1Q2NKJ3 AC025033.1-201ENST00000463883 194 ntBASIC2.25□□□□□ -2.05
CTC1Q2NKJ3 RNU6-250P-201ENST00000516958 103 ntBASIC2.25□□□□□ -2.05
CTC1Q2NKJ3 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
CTC1Q2NKJ3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CTC1Q2NKJ3 RNA5SP182-201ENST00000516064 82 ntBASIC2.24□□□□□ -2.05
CTC1Q2NKJ3 SNORA44.1-201ENST00000517031 108 ntBASIC2.24□□□□□ -2.05
CTC1Q2NKJ3 SNORA40.17-201ENST00000517256 115 ntBASIC2.24□□□□□ -2.05
CTC1Q2NKJ3 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.24□□□□□ -2.05
CTC1Q2NKJ3 SNORA2.1-201ENST00000363089 137 ntBASIC2.23□□□□□ -2.05
CTC1Q2NKJ3 RNA5SP37-201ENST00000365420 130 ntBASIC2.23□□□□□ -2.05
CTC1Q2NKJ3 SNORA48.3-201ENST00000391081 134 ntBASIC2.23□□□□□ -2.05
CTC1Q2NKJ3 SNORA17.3-201ENST00000391159 129 ntBASIC2.23□□□□□ -2.05
CTC1Q2NKJ3 snoU13.31-201ENST00000607291 104 ntBASIC2.23□□□□□ -2.05
CTC1Q2NKJ3 MIR548O2-201ENST00000616090 70 ntBASIC2.23□□□□□ -2.05
CTC1Q2NKJ3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.22□□□□□ -2.05
CTC1Q2NKJ3 MIR583-201ENST00000384846 75 ntBASIC2.22□□□□□ -2.05
CTC1Q2NKJ3 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
CTC1Q2NKJ3 RNA5SP233-201ENST00000459153 113 ntBASIC2.22□□□□□ -2.05
CTC1Q2NKJ3 MIR4299-201ENST00000577899 72 ntBASIC2.22□□□□□ -2.05
CTC1Q2NKJ3 MIR4448-201ENST00000584360 86 ntBASIC2.22□□□□□ -2.05
CTC1Q2NKJ3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.22□□□□□ -2.05
CTC1Q2NKJ3 uc_338.10-201ENST00000621872 182 ntBASIC2.22□□□□□ -2.05
CTC1Q2NKJ3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CTC1Q2NKJ3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.21□□□□□ -2.06
CTC1Q2NKJ3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CTC1Q2NKJ3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CTC1Q2NKJ3 RNU6V-201ENST00000384105 107 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 239.2 ms