Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CYP3A137P-201ENST00000562436 69 ntBASIC0.55□□□□□ -2.32
CDH12P55289 AC103810.7-201ENST00000607821 91 ntBASIC0.55□□□□□ -2.32
CDH12P55289 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
CDH12P55289 Y_RNA.466-201ENST00000384294 113 ntBASIC0.54□□□□□ -2.32
CDH12P55289 RNU7-104P-201ENST00000459398 79 ntBASIC0.54□□□□□ -2.32
CDH12P55289 AL078603.1-201ENST00000603824 313 ntBASIC0.54□□□□□ -2.32
CDH12P55289 SNORA25.18-201ENST00000607153 114 ntBASIC0.54□□□□□ -2.32
CDH12P55289 Y_RNA.818-201ENST00000618813 71 ntBASIC0.54□□□□□ -2.32
CDH12P55289 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
CDH12P55289 RNU6-147P-201ENST00000383983 107 ntBASIC0.53□□□□□ -2.32
CDH12P55289 AL161932.1-201ENST00000437408 146 ntBASIC0.53□□□□□ -2.32
CDH12P55289 RNU6-1265P-201ENST00000516342 103 ntBASIC0.53□□□□□ -2.32
CDH12P55289 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
CDH12P55289 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
CDH12P55289 AL513043.2-201ENST00000573941 143 ntBASIC0.53□□□□□ -2.32
CDH12P55289 MIR7107-201ENST00000611489 80 ntBASIC0.53□□□□□ -2.32
CDH12P55289 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.53□□□□□ -2.32
CDH12P55289 Y_RNA.107-201ENST00000363190 121 ntBASIC0.52□□□□□ -2.33
CDH12P55289 RNU6-644P-201ENST00000391155 98 ntBASIC0.52□□□□□ -2.33
CDH12P55289 SNORA40.8-201ENST00000411034 126 ntBASIC0.52□□□□□ -2.33
CDH12P55289 RNA5SP227-201ENST00000516184 113 ntBASIC0.52□□□□□ -2.33
CDH12P55289 Y_RNA.93-201ENST00000363066 109 ntBASIC0.51□□□□□ -2.33
CDH12P55289 SNORD118-201ENST00000363593 134 ntBASIC0.51□□□□□ -2.33
CDH12P55289 RNU6-957P-201ENST00000363652 99 ntBASIC0.51□□□□□ -2.33
CDH12P55289 RNU6-726P-201ENST00000364680 107 ntBASIC0.51□□□□□ -2.33
CDH12P55289 RNU6-716P-201ENST00000365621 103 ntBASIC0.51□□□□□ -2.33
CDH12P55289 snoU13.11-201ENST00000459219 104 ntBASIC0.51□□□□□ -2.33
CDH12P55289 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.51□□□□□ -2.33
CDH12P55289 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CDH12P55289 Y_RNA.544-201ENST00000384650 113 ntBASIC0.5□□□□□ -2.33
CDH12P55289 MIR518A1-201ENST00000385068 85 ntBASIC0.5□□□□□ -2.33
CDH12P55289 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CDH12P55289 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
CDH12P55289 RNU7-61P-201ENST00000515897 61 ntBASIC0.5□□□□□ -2.33
CDH12P55289 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
CDH12P55289 Y_RNA.705-201ENST00000516862 110 ntBASIC0.5□□□□□ -2.33
CDH12P55289 MIR151B-201ENST00000584249 96 ntBASIC0.5□□□□□ -2.33
CDH12P55289 TRDV1-202ENST00000621643 102 ntBASIC0.5□□□□□ -2.33
CDH12P55289 AC067863.3-201ENST00000624172 122 ntBASIC0.5□□□□□ -2.33
CDH12P55289 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CDH12P55289 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
CDH12P55289 MIR3920-201ENST00000581751 86 ntBASIC0.49□□□□□ -2.33
CDH12P55289 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.49□□□□□ -2.33
CDH12P55289 MIR6788-201ENST00000618842 66 ntBASIC0.49□□□□□ -2.33
CDH12P55289 Y_RNA.81-201ENST00000362997 102 ntBASIC0.48□□□□□ -2.33
CDH12P55289 SNORD41.1-201ENST00000391000 69 ntBASIC0.48□□□□□ -2.33
CDH12P55289 RNU6-972P-201ENST00000391208 107 ntBASIC0.48□□□□□ -2.33
CDH12P55289 MIR548J-201ENST00000408833 112 ntBASIC0.48□□□□□ -2.33
CDH12P55289 RNU6-887P-201ENST00000410660 100 ntBASIC0.48□□□□□ -2.33
CDH12P55289 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
CDH12P55289 MTATP8P2-201ENST00000435212 202 ntBASIC0.48□□□□□ -2.33
CDH12P55289 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
CDH12P55289 Y_RNA.648-201ENST00000459455 110 ntBASIC0.48□□□□□ -2.33
CDH12P55289 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
CDH12P55289 RNU6-158P-201ENST00000517104 100 ntBASIC0.48□□□□□ -2.33
CDH12P55289 MIR4714-201ENST00000580728 77 ntBASIC0.48□□□□□ -2.33
CDH12P55289 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.48□□□□□ -2.33
CDH12P55289 AP001318.4-201ENST00000616637 121 ntBASIC0.48□□□□□ -2.33
CDH12P55289 MIR6734-201ENST00000621166 68 ntBASIC0.48□□□□□ -2.33
CDH12P55289 U6.100-201ENST00000636230 99 ntBASIC0.48□□□□□ -2.33
CDH12P55289 MIR548L-201ENST00000408303 86 ntBASIC0.47□□□□□ -2.33
CDH12P55289 MIR1287-201ENST00000408492 90 ntBASIC0.47□□□□□ -2.33
CDH12P55289 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
CDH12P55289 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.47□□□□□ -2.33
CDH12P55289 RNA5SP220-201ENST00000516298 104 ntBASIC0.47□□□□□ -2.33
CDH12P55289 RNU7-13P-201ENST00000516413 62 ntBASIC0.47□□□□□ -2.33
CDH12P55289 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
CDH12P55289 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
CDH12P55289 RNU6-153P-201ENST00000364422 104 ntBASIC0.46□□□□□ -2.34
CDH12P55289 Y_RNA.283-201ENST00000364798 112 ntBASIC0.46□□□□□ -2.34
CDH12P55289 SNORD58A-201ENST00000383875 65 ntBASIC0.46□□□□□ -2.34
CDH12P55289 RNU6-32P-201ENST00000383948 107 ntBASIC0.46□□□□□ -2.34
CDH12P55289 RNU6-13P-201ENST00000384248 107 ntBASIC0.46□□□□□ -2.34
CDH12P55289 Y_RNA.495-201ENST00000384435 112 ntBASIC0.46□□□□□ -2.34
CDH12P55289 RNU6-12P-201ENST00000384604 107 ntBASIC0.46□□□□□ -2.34
CDH12P55289 RNU6-41P-201ENST00000384741 107 ntBASIC0.46□□□□□ -2.34
CDH12P55289 RNU6-466P-201ENST00000391224 103 ntBASIC0.46□□□□□ -2.34
CDH12P55289 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.46□□□□□ -2.34
CDH12P55289 AC069271.1-201ENST00000445577 156 ntBASIC0.46□□□□□ -2.34
CDH12P55289 RNU6-162P-201ENST00000516228 103 ntBASIC0.46□□□□□ -2.34
CDH12P55289 Y_RNA.96-201ENST00000363092 109 ntBASIC0.45□□□□□ -2.34
CDH12P55289 Y_RNA.226-201ENST00000364337 114 ntBASIC0.45□□□□□ -2.34
CDH12P55289 Y_RNA.348-201ENST00000365403 103 ntBASIC0.45□□□□□ -2.34
CDH12P55289 RNU6-1126P-201ENST00000384002 107 ntBASIC0.45□□□□□ -2.34
CDH12P55289 RNA5SP247-201ENST00000411181 105 ntBASIC0.45□□□□□ -2.34
CDH12P55289 RNU7-85P-201ENST00000458851 63 ntBASIC0.45□□□□□ -2.34
CDH12P55289 RNU6-75P-201ENST00000515944 104 ntBASIC0.45□□□□□ -2.34
CDH12P55289 MIR548AG2-201ENST00000581228 64 ntBASIC0.45□□□□□ -2.34
CDH12P55289 U7.3-201ENST00000616123 62 ntBASIC0.45□□□□□ -2.34
CDH12P55289 AL162376.1-201ENST00000624117 175 ntBASIC0.45□□□□□ -2.34
CDH12P55289 SNORD44.1-201ENST00000363202 61 ntBASIC0.44□□□□□ -2.34
CDH12P55289 RNU6-1223P-201ENST00000517124 104 ntBASIC0.44□□□□□ -2.34
CDH12P55289 MIR5000-201ENST00000577717 103 ntBASIC0.44□□□□□ -2.34
CDH12P55289 MTRNR2L2-201ENST00000604882 87 ntBASIC0.44□□□□□ -2.34
CDH12P55289 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
CDH12P55289 RNU6-269P-201ENST00000391077 97 ntBASIC0.43□□□□□ -2.34
CDH12P55289 MIR4752-201ENST00000579672 72 ntBASIC0.43□□□□□ -2.34
CDH12P55289 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
CDH12P55289 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
CDH12P55289 RNU6-640P-201ENST00000363693 105 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms