Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 MIR4319-201ENST00000577285 85 ntBASIC2.56□□□□□ -2
EMP3P54852 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
EMP3P54852 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
EMP3P54852 RNA5SP450-201ENST00000411206 102 ntBASIC2.55□□□□□ -2
EMP3P54852 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.55□□□□□ -2
EMP3P54852 SNORA63.6-201ENST00000364921 119 ntBASIC2.54□□□□□ -2
EMP3P54852 AL021921.1-201ENST00000442774 93 ntBASIC2.54□□□□□ -2
EMP3P54852 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
EMP3P54852 MIR6852-201ENST00000621699 66 ntBASIC2.54□□□□□ -2
EMP3P54852 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.53□□□□□ -2
EMP3P54852 Y_RNA.174-201ENST00000363781 105 ntBASIC2.53□□□□□ -2
EMP3P54852 RNU6-1204P-201ENST00000363948 107 ntBASIC2.53□□□□□ -2
EMP3P54852 MIR517C-201ENST00000385103 95 ntBASIC2.53□□□□□ -2
EMP3P54852 MIR758-201ENST00000390227 88 ntBASIC2.53□□□□□ -2
EMP3P54852 SNORD41.1-201ENST00000391000 69 ntBASIC2.53□□□□□ -2
EMP3P54852 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.53□□□□□ -2
EMP3P54852 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
EMP3P54852 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2.01
EMP3P54852 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
EMP3P54852 RNA5SP393-201ENST00000363423 117 ntBASIC2.52□□□□□ -2.01
EMP3P54852 RNU6-439P-201ENST00000384188 106 ntBASIC2.52□□□□□ -2.01
EMP3P54852 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.52□□□□□ -2.01
EMP3P54852 Z96811.1-201ENST00000445880 108 ntBASIC2.52□□□□□ -2.01
EMP3P54852 RNU5B-6P-201ENST00000516765 68 ntBASIC2.52□□□□□ -2.01
EMP3P54852 CYP3A54P-201ENST00000566950 75 ntBASIC2.52□□□□□ -2.01
EMP3P54852 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.52□□□□□ -2.01
EMP3P54852 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
EMP3P54852 SNORD28-201ENST00000384706 75 ntBASIC2.51□□□□□ -2.01
EMP3P54852 HMGN2P38-201ENST00000423806 265 ntBASIC2.51□□□□□ -2.01
EMP3P54852 RNU6-518P-201ENST00000516056 96 ntBASIC2.51□□□□□ -2.01
EMP3P54852 MIR4804-201ENST00000581683 73 ntBASIC2.51□□□□□ -2.01
EMP3P54852 MIR4672-201ENST00000583126 81 ntBASIC2.51□□□□□ -2.01
EMP3P54852 AL359851.1-201ENST00000569460 4997 ntBASIC2.51□□□□□ -2.01
EMP3P54852 AC108938.1-201ENST00000451204 136 ntBASIC2.5□□□□□ -2.01
EMP3P54852 RNU6-1206P-201ENST00000516339 103 ntBASIC2.5□□□□□ -2.01
EMP3P54852 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
EMP3P54852 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
EMP3P54852 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
EMP3P54852 RNU1-141P-201ENST00000364623 158 ntBASIC2.49□□□□□ -2.01
EMP3P54852 Y_RNA.500-201ENST00000384466 111 ntBASIC2.49□□□□□ -2.01
EMP3P54852 MIR196B-201ENST00000384852 84 ntBASIC2.49□□□□□ -2.01
EMP3P54852 UBE2DNL-203ENST00000474922 222 ntBASIC2.49□□□□□ -2.01
EMP3P54852 MIR3664-201ENST00000579074 99 ntBASIC2.49□□□□□ -2.01
EMP3P54852 MIR548AG1-201ENST00000579932 66 ntBASIC2.49□□□□□ -2.01
EMP3P54852 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
EMP3P54852 MIR582-201ENST00000365731 98 ntBASIC2.48□□□□□ -2.01
EMP3P54852 SNORA67.3-201ENST00000384366 140 ntBASIC2.48□□□□□ -2.01
EMP3P54852 RNU6-721P-201ENST00000410155 105 ntBASIC2.48□□□□□ -2.01
EMP3P54852 RNU7-56P-201ENST00000458744 62 ntBASIC2.48□□□□□ -2.01
EMP3P54852 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.48□□□□□ -2.01
EMP3P54852 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.47□□□□□ -2.01
EMP3P54852 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
EMP3P54852 RNU6-742P-201ENST00000365289 107 ntBASIC2.47□□□□□ -2.01
EMP3P54852 SNORA11.2-201ENST00000408318 127 ntBASIC2.47□□□□□ -2.01
EMP3P54852 RNA5SP94-201ENST00000516917 108 ntBASIC2.47□□□□□ -2.01
EMP3P54852 AL359821.1-201ENST00000605519 182 ntBASIC2.47□□□□□ -2.01
EMP3P54852 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.47□□□□□ -2.01
EMP3P54852 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
EMP3P54852 Y_RNA.109-201ENST00000363215 102 ntBASIC2.46□□□□□ -2.02
EMP3P54852 RNU6-59P-201ENST00000384787 107 ntBASIC2.46□□□□□ -2.02
EMP3P54852 MIR27B-201ENST00000385129 97 ntBASIC2.46□□□□□ -2.02
EMP3P54852 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.46□□□□□ -2.02
EMP3P54852 MIR5092-201ENST00000583139 88 ntBASIC2.46□□□□□ -2.02
EMP3P54852 AL157834.3-201ENST00000615543 103 ntBASIC2.46□□□□□ -2.02
EMP3P54852 AC090617.8-201ENST00000623339 167 ntBASIC2.46□□□□□ -2.02
EMP3P54852 Y_RNA.69-201ENST00000362885 109 ntBASIC2.45□□□□□ -2.02
EMP3P54852 RNA5SP68-201ENST00000363885 119 ntBASIC2.45□□□□□ -2.02
EMP3P54852 SNORA6-201ENST00000384033 151 ntBASIC2.45□□□□□ -2.02
EMP3P54852 RNU1-119P-201ENST00000391122 165 ntBASIC2.45□□□□□ -2.02
EMP3P54852 AC079804.2-201ENST00000490376 200 ntBASIC2.45□□□□□ -2.02
EMP3P54852 SNORA77B-201ENST00000578179 125 ntBASIC2.45□□□□□ -2.02
EMP3P54852 MIR4513-201ENST00000581077 86 ntBASIC2.45□□□□□ -2.02
EMP3P54852 AL136317.1-201ENST00000612653 226 ntBASIC2.45□□□□□ -2.02
EMP3P54852 AL773524.1-201ENST00000614065 229 ntBASIC2.45□□□□□ -2.02
EMP3P54852 MIR6817-201ENST00000615588 66 ntBASIC2.45□□□□□ -2.02
EMP3P54852 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
EMP3P54852 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
EMP3P54852 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
EMP3P54852 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
EMP3P54852 RNU6-1008P-201ENST00000384160 104 ntBASIC2.44□□□□□ -2.02
EMP3P54852 MIR519A2-201ENST00000384990 87 ntBASIC2.44□□□□□ -2.02
EMP3P54852 MIR579-201ENST00000385221 98 ntBASIC2.44□□□□□ -2.02
EMP3P54852 SNORD111-201ENST00000408139 94 ntBASIC2.44□□□□□ -2.02
EMP3P54852 MIR548E-201ENST00000408287 88 ntBASIC2.44□□□□□ -2.02
EMP3P54852 SCARNA17.3-201ENST00000516381 125 ntBASIC2.44□□□□□ -2.02
EMP3P54852 MIR5194-201ENST00000582634 120 ntBASIC2.44□□□□□ -2.02
EMP3P54852 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.44□□□□□ -2.02
EMP3P54852 SNORA75.2-201ENST00000391138 150 ntBASIC2.43□□□□□ -2.02
EMP3P54852 SNORA75.3-201ENST00000391231 150 ntBASIC2.43□□□□□ -2.02
EMP3P54852 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
EMP3P54852 RPL23AP94-201ENST00000512518 302 ntBASIC2.43□□□□□ -2.02
EMP3P54852 RNU7-160P-201ENST00000516660 62 ntBASIC2.43□□□□□ -2.02
EMP3P54852 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
EMP3P54852 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
EMP3P54852 MIR4658-201ENST00000584344 65 ntBASIC2.42□□□□□ -2.02
EMP3P54852 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
EMP3P54852 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
EMP3P54852 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
EMP3P54852 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
EMP3P54852 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms